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  1. Transcript 'Phfumi.CG.MTP2014.S8...' > 
  2. Transcript 'KH2012:KH.C12.153.v2...' > 
  3. Transcript 'KH2012:KH.C8.225.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.225.v1.R.ND1-1

Possible name(s)

MED16

Gene model

KH2012:KH.C8.225

Location

KhC8 [3,805,865 / 3,814,911]

Sequences

Amino acid sequence

Length: 830

>KH.C8.225.v1.R.ND1-1
GMDPVYEIDWQADVNQITLGHGDIVECAWSASNFFAFTTEKNNQGSVTQYLHILNPNQPW
GVFSTKYNDGAITCLQWDHTGTRLVSGDNHGLCCLWTMSNSLCNVWTHQNKHNIFLEGEE
ILSLGWLHNGARFLFHIDKMESSNLGEKFDRAKFWPTVMQHGGKAMEGFIVVTGSGLAAV
RLLLVDGESVESQFRLNVMCHQQIADIAFTSQGKVVVMTTDSEIQHFIQFHEIQLTYNTQ
DHLISHEVSALPSLQLRCASEEHSPYTYISHAHFVSRENQDHVLICVSGPTGSKFESWLI
RKESVQLHRIFQQNTNPVSTTPDVSKCWHYVTNSTHLPQVLNFSIPTLPIDASSSENKVS
QESKFFCGFCFAVALADNTIQILHRLFLQVLVTQHLPVTTNSQETTPGKAMKMTQQFGVR
HVSFSTLSCAMIAADKHGRLLLYRIPPWLTTPNRTNTMQSLKQLLQLMLYCLVSGKEWWE
ILLHVHPNLVEPLVKQLSVECGNQTSAVQQVLELRLQALKISIYHITASPVATDLHLKML
FQAISLVFRSLVRPHQQVGGEEIDPATKLQNISRTSTETNIDQLVQNVDTDPQTLQSMQQ
LIQWVADVALYLLASVPLYKQANRPGYSLYWDRDWLSLLREMLVLIRVWGLLKSACSPVF
NVLDSRMDVLSHVFKLVTQLWMASTDDHRMTDLPTSLINECSALPFHIIIPPLEPTPPPN
SVLSQMRNFSGTRRFTFGETPQDSYIMLSRQHMMDHVAVAGSSGKVDSLRRIFLGKSPNQ
ELKECVRCGVTTTCNNLLRSTLKVWDQRFVSSCVCGGHWKKLNSHPVPLH

Nucleotide sequence

Length: 2,930

>KH2012:KH.C8.225.v1.R.ND1-1
ACATTTAGCTGCATAGGTTAGGGAATGGATCCTGTTTATGAAATAGATTGGCAAGCAGAT
GTCAACCAAATAACTCTTGGTCACGGTGACATAGTAGAGTGTGCGTGGTCAGCAAGCAAC
TTTTTTGCGTTCACAACTGAAAAAAACAACCAAGGTTCAGTCACTCAGTATCTTCATATA
TTAAACCCCAACCAGCCATGGGGTGTATTTAGCACTAAATATAATGATGGTGCAATTACT
TGCTTGCAGTGGGACCATACAGGTACAAGACTCGTATCAGGTGACAACCATGGCTTATGC
TGCCTGTGGACAATGTCTAACTCCTTGTGTAATGTGTGGACTCATCAGAATAAACATAAC
ATTTTCCTGGAAGGAGAAGAAATATTATCATTAGGCTGGTTGCATAATGGTGCAAGGTTT
TTATTCCATATCGACAAAATGGAGTCATCGAACTTGGGTGAAAAATTTGATCGAGCAAAA
TTTTGGCCAACTGTTATGCAGCATGGTGGGAAGGCTATGGAAGGTTTTATCGTTGTTACT
GGTTCGGGGCTTGCTGCTGTGAGACTACTTCTTGTTGATGGCGAAAGTGTCGAGTCACAG
TTTCGTCTAAATGTGATGTGTCACCAACAAATTGCTGATATTGCATTTACGAGCCAAGGT
AAAGTGGTTGTGATGACAACAGACAGTGAGATTCAACATTTCATTCAATTCCATGAAATT
CAACTCACATACAACACACAGGATCATCTTATATCACATGAGGTATCTGCACTTCCAAGT
TTACAGCTACGTTGCGCAAGTGAAGAGCATTCACCTTACACCTATATATCTCATGCTCAT
TTTGTATCACGTGAAAACCAAGATCATGTGCTTATTTGTGTTTCTGGGCCGACTGGTTCA
AAATTTGAAAGTTGGTTGATTCGTAAAGAGAGCGTTCAACTACATCGAATATTTCAACAA
AATACGAACCCAGTGTCAACCACACCTGATGTTTCTAAGTGCTGGCATTATGTTACGAAC
TCTACACATCTGCCACAGGTTCTTAACTTCTCCATACCCACCCTTCCCATTGATGCTTCA
TCCAGTGAAAACAAAGTCTCACAGGAAAGCAAGTTTTTCTGCGGCTTTTGTTTTGCAGTT
GCACTTGCAGACAATACAATTCAAATTCTACACAGGTTATTTCTGCAGGTGTTGGTAACT
CAGCACTTGCCAGTAACAACTAACTCACAAGAAACAACACCTGGTAAAGCAATGAAGATG
ACCCAGCAGTTTGGAGTCAGACATGTTTCATTTTCAACACTTTCTTGCGCTATGATAGCA
GCAGATAAACATGGTCGTTTACTTTTATATCGTATTCCACCATGGCTAACCACACCTAAC
AGAACAAACACTATGCAATCATTGAAACAACTTCTACAACTTATGCTCTACTGTCTTGTA
TCTGGAAAAGAATGGTGGGAAATTCTGCTTCATGTTCATCCCAACTTGGTGGAACCACTG
GTGAAGCAACTTAGTGTGGAGTGTGGTAACCAAACATCAGCTGTACAGCAGGTGCTAGAG
TTAAGATTACAAGCATTAAAGATCAGCATATACCACATCACTGCTAGTCCTGTTGCTACT
GATCTACATCTTAAAATGCTGTTTCAAGCTATTTCTCTTGTGTTTCGTTCTCTTGTTCGA
CCCCACCAGCAAGTGGGGGGTGAAGAGATTGACCCCGCTACTAAGCTACAGAATATATCC
AGGACATCCACAGAGACCAACATTGATCAGTTGGTACAGAATGTTGATACTGATCCACAG
ACCTTACAATCAATGCAACAACTTATACAATGGGTGGCAGATGTTGCTTTATATTTGCTT
GCGTCTGTGCCACTATATAAACAAGCCAACCGACCTGGCTACTCTTTATATTGGGATCGT
GACTGGCTATCCTTGCTTCGTGAGATGCTTGTACTTATAAGGGTCTGGGGGTTGCTCAAG
TCAGCGTGCTCACCTGTGTTTAACGTGCTCGACTCACGGATGGATGTCTTGTCTCACGTG
TTTAAACTCGTTACTCAACTTTGGATGGCTAGCACTGATGATCATCGTATGACCGATCTA
CCAACCAGTTTAATCAATGAATGCAGTGCCTTACCCTTCCATATTATAATCCCACCCCTT
GAACCAACCCCACCACCCAACAGTGTGCTTAGTCAGATGAGAAATTTCAGTGGTACTCGA
AGGTTTACATTTGGAGAAACTCCACAGGATAGTTACATCATGTTGTCACGCCAACATATG
ATGGATCATGTTGCTGTTGCTGGTAGCTCTGGAAAGGTTGACTCACTTAGAAGGATTTTC
TTGGGAAAGTCACCAAATCAGGAATTAAAAGAATGTGTTCGGTGTGGCGTCACAACAACT
TGCAATAATCTCCTGCGTTCCACCCTGAAAGTTTGGGACCAACGTTTTGTTTCCAGCTGT
GTGTGTGGTGGCCACTGGAAGAAGTTAAACTCCCATCCTGTTCCATTGCATTGAATTTGA
ATTAGAACTACATGTTTCCGTGCTACGTGTTTACATTTCTTGCACTGCTATCATTTTTCT
AATTGAAAAGCTCACATCTGCCTTTAGTTCATGTCGTTTCTTTTACCGCTTAATCATGTA
ACAATTAAACCCAAAAATTTCCATGGTTTAGAATATTAAGTAGTCATTTTGAAATCCTAC
TTTTTTAGCCTAAACTGGAATCATTTTTTGGTTCGTTGAGATATTGCAAACTACCAGATC
TGATAATCGTTTATTTTGGGCAACTTTTTGACGCCGCGGGGTTTGAAAAACGAAGTTCTT
CTGCAATTTCCCTACGATGAAAGCTAACATGTGCATGTTACTGTCAGTAGAAATTGAGGA
AGGCTGGGGTAAATTGAGACATTACGTGTTTGTTTATTTTTATCCATATG

InterProScan

Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[5-228] 5.3E-9
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[20-131] 1.08E-9 - T[170-228] 1.08E-9
Pfam
Mediator_Med16 (IPR021665) - T[117-820] 1.9E-50

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MED16_HUMAN 34.736 % 473 3.39E-154