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  1. Transcript 'KH2012:KH.C2.216.v2....'
  2. Transcript 'KH2012:KH.C8.23.v3.A...'

Transcript Model

Transcript Id

KH2012:KH.C8.23.v3.A.SL2-1

Possible name(s)

MIDN

Location

KhC8 [5,213,895 / 5,226,939]

Sequences

Amino acid sequence

Length: 797

>KH.C8.23.v3.A.SL2-1
KLPLFVTMDAKETASSVPELPAGNCETQQSITLSICPITGGTFDLEVRASDSVEELRKKI
ARHLQTPKERLTILFKEKVLTSGMLADQQIQDGNKITLLPSVESGFSSTVQGTQQSIIQA
IESLSDVQIDDFLSGRSPLTLALRVGDHMMFVQLQLEQSMVQGSNAGTTPTTHPSVPGRS
GQRSSRHNRHRSHHIPGFPPRCSPDHSAALNCLPPSLWTNNPAFNPISRVPASVTSSLSP
ENETTKFESSSSESSQRDTSTPLAAASGMGGPTTGLLYKTTACPSLKRAAVASLPHLPLD
KPSHLDKLVTACSSLGTSTSQSSSSQKSSSGKAKMDPRTHSSRRTPSGTPYPTNSQNYHY
RRASTTSGKITSGVGSLTHNSSLNGTPRVMRQMQRLRRLCGAHQQCVAYSSPELASEISS
IVHAAKHHSSSDNSAYHRRSNGKSSQKERPRSSQATTSSPTPSVPAAGASIDSFTTHGPG
IFSGTFSGSLHPNIQDNDGRPKRDPQTILQILTDLLSATNHYQGQAGNIGMLPQLLKDHF
TKQQAGTSATNEPTRETPTPPAEQEAGTSRPQHSRSRHPQHFPHPYLPQQFNNTPYVYPY
LPGSQTGVPHSYAAYQHMAGQAAVFHHYTHNNGIVTPPDNCYHHQRVSGKCPHRRYGDHH
AGSSSSKSRQSPYWCCCSSSSSRRSSKQAPHINMGRLKQLQQENNTTRSKLQQLTHMMQE
RRMRRKMRREACAPYGKPNHASCSGAEKAAESNALIASPEGDSSEPSGLEVQIDNLHNYA
DDRKSEVALESPETVTV

Nucleotide sequence

Length: 3,279

>KH2012:KH.C8.23.v3.A.SL2-1
AATTTTAGGCAAATTTGTGTATAGTTAAATTTAAAGTTTAGCTAAGTTTTTTGAGAAAAA
GTTAAAAGAATTTGGTTTAAATCTGTTGACCAACTAACTGGGTCAATTTCATTTGAAAGT
TACCACTTTTTGTGACTATGGATGCTAAAGAAACAGCATCTTCCGTTCCGGAGTTACCAG
CTGGAAATTGTGAAACGCAACAGTCAATCACTTTATCCATATGTCCAATAACTGGAGGCA
CTTTTGACTTGGAAGTTAGAGCCAGTGACTCAGTTGAAGAACTAAGGAAGAAAATAGCCC
GACATTTGCAAACCCCAAAGGAACGATTGACTATTCTGTTTAAAGAAAAGGTATTGACTT
CGGGAATGTTGGCTGACCAACAAATTCAAGATGGAAATAAGATAACGTTGCTACCTTCTG
TCGAAAGTGGTTTTTCGTCGACAGTACAAGGAACTCAACAGTCGATTATCCAAGCCATAG
AAAGCCTCTCCGACGTACAAATTGATGATTTTTTATCGGGTCGATCGCCACTTACACTCG
CACTACGTGTTGGAGACCATATGATGTTTGTGCAGTTGCAACTGGAGCAGTCTATGGTAC
AAGGAAGCAATGCAGGGACCACGCCTACAACACACCCATCAGTGCCAGGTAGATCCGGGC
AACGGTCTTCTCGCCACAACCGTCACCGATCGCATCACATCCCGGGTTTCCCACCTCGCT
GTTCGCCGGACCATTCGGCAGCGCTCAACTGCCTTCCACCCAGCTTATGGACCAACAACC
CGGCATTCAACCCAATATCCCGAGTTCCCGCTTCTGTGACGTCATCTCTCTCCCCCGAAA
ACGAAACCACAAAATTCGAATCCTCTTCATCCGAGTCAAGCCAACGGGACACCTCAACAC
CGCTGGCAGCGGCCTCTGGTATGGGAGGACCCACGACCGGCCTACTGTACAAAACAACCG
CCTGTCCCTCCTTGAAACGAGCTGCAGTGGCTTCTTTACCCCACCTACCCCTTGATAAAC
CATCCCATCTCGACAAACTGGTCACTGCTTGCTCATCACTTGGTACATCTACATCCCAGA
GTAGCAGCTCCCAGAAATCGAGCTCAGGGAAGGCAAAGATGGACCCCAGGACCCACTCGT
CCCGGCGAACTCCTTCTGGGACCCCTTACCCCACAAACAGCCAGAACTACCACTACAGAC
GTGCCTCTACTACGAGCGGAAAGATTACGTCCGGAGTTGGTTCGCTCACGCACAACAGTT
CATTGAATGGCACCCCACGAGTAATGCGCCAGATGCAGCGATTGCGGCGTTTATGTGGCG
CTCACCAGCAGTGTGTGGCGTACAGCAGCCCTGAGCTTGCTTCAGAAATCTCATCGATCG
TTCATGCTGCAAAACACCATTCTTCCTCGGATAATTCTGCCTACCACCGTCGTAGTAATG
GCAAGAGCTCCCAAAAAGAGCGTCCCAGGTCATCCCAGGCAACAACTTCCTCTCCCACTC
CTTCTGTTCCTGCAGCAGGAGCATCCATCGACTCTTTCACGACCCACGGACCTGGGATTT
TCTCCGGGACTTTTTCAGGTTCGTTGCACCCGAACATTCAGGACAACGACGGCCGACCTA
AGAGAGACCCACAGACCATCCTGCAGATTTTGACCGATCTCTTGAGTGCGACCAACCATT
ACCAGGGGCAGGCAGGGAATATTGGGATGCTACCTCAACTGCTGAAGGATCATTTCACGA
AACAGCAAGCTGGTACAAGTGCCACCAACGAGCCAACCAGAGAGACACCAACCCCACCAG
CTGAACAGGAGGCAGGCACCAGTCGTCCACAACACAGCAGAAGTCGTCACCCTCAGCACT
TTCCACACCCTTACTTACCCCAACAGTTTAACAATACACCATACGTGTATCCCTACCTTC
CCGGTTCCCAAACAGGGGTCCCACACTCTTACGCTGCGTACCAGCACATGGCCGGTCAAG
CGGCCGTTTTCCACCACTATACTCATAACAACGGTATCGTCACCCCGCCTGATAACTGCT
ACCATCATCAGCGAGTGTCGGGCAAATGCCCACATCGACGTTATGGCGATCACCACGCCG
GAAGTTCAAGCTCCAAGTCCCGCCAGTCCCCGTACTGGTGCTGCTGCTCGTCCAGTTCTA
GTCGACGATCAAGCAAGCAAGCGCCGCATATCAACATGGGCCGATTGAAGCAGCTTCAGC
AGGAAAACAACACCACACGCTCCAAGCTTCAACAACTTACACACATGATGCAGGAACGTA
GAATGCGGCGCAAAATGCGACGGGAAGCTTGCGCTCCATATGGCAAACCTAACCACGCAT
CTTGCTCTGGTGCCGAAAAGGCTGCAGAATCCAACGCTCTTATTGCGAGCCCAGAAGGCG
ACAGTTCCGAGCCAAGCGGGCTTGAGGTCCAGATCGACAACTTGCACAACTATGCCGACG
ATCGAAAGTCCGAGGTGGCACTAGAGTCGCCGGAAACCGTCACCGTATGAGTCATCACGG
TCAGTGATCGTTTTAGCTCACAGCACCACCACTCACGAGTGACATGATTTATCACGCCGT
GAAAAAGCCCAGCTTTAGCCGCGATAGCAGCGCAAAACCACCTTCGTCCGTTTTAGAAAC
TTTGTACATATAACCTAAACCTTAGGCACTCACAAACGTGCACTCATGAGCGTCACGCCG
TGAGCCACTCACGACGGCGTCTCATGCTTGAATCCCACGGTTTTGATGCACGTTTTGATT
TTTAAGTATTTCTAACGTTGAAATCCCCACAAAACCACCATCTCTTGCATTATCCGATGT
TACGTACTCTCCGATCGTCGCAAGTTTTTTCAACCCCTATTTTTCAGTTTTTGTTGTGCG
CCGTGTGTCCCACCTCACCCCTTTTTTGATTTTTTCATTTTTGGTTCGAACAACTCTCTT
CCGTTGCTTCCCAAGAACGAGGGAAGAAGGCATATCTTTTTTGTTGTTTTTTTCCCTTTT
TCCCTCTCTCTCCTTTTTCCCACATCTCTCCATGTGATATCAGTCATTTATCCATGTTAG
TATTATGGCCATCCTCCAAAGCTACCTCCAGCCTCCGCAATTGTTCCGTCGGAGCACCTC
CGTCGAGTAAAAAAACAAGGGAAAATAAATGGGCAATAAATTCCCCGTTTACGGCTATTT
CTCAGTCGCTCTTACACCAGAGAAAGCCATTGAACTTGAAGATCTGCCGAACCTCCAGTT
TTGGGCGAGCTATCGCCGCGAAAAAAATCTTTCGTTTTA

InterProScan

SUPERFAMILY
Ubiquitin-like_domsf (IPR029071) - T[23-112] 4.84E-13
SMART
Ubiquitin_dom (IPR000626) - T[31-101] 4.6E-6
ProSiteProfiles
Ubiquitin_dom (IPR000626) - T[31-105] 12.379
Pfam
Ubiquitin_dom (IPR000626) - T[38-98] 3.6E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
MIDN_HUMAN 51.064 % 145 2.56E-37