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  1. Transcript 'KH2012:KH.C11.218.v1...'
  2. Transcript 'Haaura.CG.MTP2014.S4...'
  3. Transcript 'Haaura.CG.MTP2014.S6...'
  4. Clone 'csga081m01'
  5. Transcript 'KH2012:KH.C8.404.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.404.v1.A.nonSL12-1

Possible name(s)

TRMT1; TRMT1L

Location

KhC8 [4,628,583 / 4,631,297]

Sequences

Amino acid sequence

Length: 461

>KH.C8.404.v1.A.nonSL12-1
TIKMNLLNGKLVENNAEIPLVKSYEDVMSFKRVSKVCELGLSRAIALACLEIVKLETDGV
TSALDAVNSFGAAGMQWAKHFLSENISITVNTALGLDDVCKKWLNENNCPTDSVKVVSMD
PQVLMHSSKHKFVYLEVTGTVVPYLDAAVRSVNHNGLLCVTCTDTSTLYNKCPTTAQRLY
GANLLKNEYCKEVAIRVIISNIAQSAARWNKGIKVELCASVEPGFTVVCRVLRGPKHGDI
STSSIQLLEHCQLCQARRFKPRTKYITYGNGKTLCKCSTEEAAAPLLLLGPMWSGSIFQP
EFVLKTCLTAKQMNLSLEHRKILELILLESVCCKTNEEEENLLKHTTQFNGKNQLNEKSE
PKHKKIKLDSEVSSENGPSLTKEMRSYKHIPFYCDFQHHSVKGGNPPRLLTVLNELRSRG
YNASKTHFGPRCIRTSASVEQFDEILKHLWEVTTKHNGIKV

Nucleotide sequence

Length: 2,714

>KH2012:KH.C8.404.v1.A.nonSL12-1
ACAAAATTTCTAGAGTATTAGCAGAAGAAAAAATGGCGTTAACTGCCGAGACATTAAAAG
ATAAACTGACAAAGGAGCTGAGTGCAGAATACGTGGATGTAAAGGACATTTCTCCCGACA
TGTGTGGAACCAGTTTCCATGCTGTTGTTGTTTCGCCCCAGTTTGTGGGTAAAGCTCGCT
TGCAACAGCAGCGAATGGTTAACAATGCACTTGCTGAGGAGATGCCATCAATCCACGCTT
TTACACAAAAGACATACACACCAGAAGCATGGAAAAAGGCAAACTCTACGGACTGATTAT
ATTTCTGAGTTAATTTAAACAATATTTGTTTGACCATTATAAACGTTCAGATTTCCTATA
ATTTTTTTTGCGTTATAAGGCCCATTATTGTGCAATGCATAAGGCCTGCTTTCTGCACAG
TTTTTACCAGACTGATTAGTTGTCAGTCTTGTCACTTTTAGAATATGAATAAAGTCTGCA
TGGTTGGAAGTGGAATAATTCTCTTCAGATTAGTAACTCCATGTTTTTATAATCACAAAA
AGCTATTGAGTTAGTACATGTACATGATAACATTTTATAAAGAAATTTAACCTAAAACGT
TGGAATTGAAGGCATATTATTCAAACTATTTATATCTATTTATGACAAATTTAATTTCTG
AATTCTGATTATAAGGTTTTGTTTGATTATGATATGCTTGTGGAGTAAACAATATTGTTT
TGTTACTTTAGAAAAAAAATACATGTATATATGATTTTTTATATAATCAGCTCTATTGAG
ACTATTGCTATTTATCAATTTTTTAAACAATTAAAATGAATCTTCTAAATGGAAAATTAG
TTGAAAACAACGCTGAGATTCCTCTGGTCAAATCATATGAAGATGTTATGAGTTTTAAAC
GTGTTTCAAAAGTCTGTGAGCTTGGACTCAGTCGTGCCATTGCTTTGGCTTGCTTAGAAA
TCGTAAAACTTGAAACTGATGGAGTTACATCAGCTCTTGATGCTGTTAACTCTTTTGGTG
CTGCTGGCATGCAATGGGCAAAGCATTTTCTCTCAGAAAACATTTCCATCACTGTAAACA
CAGCACTTGGACTGGATGATGTCTGTAAGAAATGGCTGAATGAGAATAACTGCCCAACTG
ATTCTGTTAAGGTTGTGTCTATGGATCCCCAGGTTCTTATGCACAGCTCCAAACACAAGT
TTGTGTATTTAGAAGTGACTGGAACAGTTGTGCCTTACCTTGATGCTGCTGTTCGTAGTG
TAAACCACAATGGTTTGTTGTGTGTGACTTGTACAGATACTTCAACTTTATACAACAAGT
GCCCAACTACAGCCCAACGTCTCTACGGAGCCAATCTGTTAAAAAATGAATATTGCAAAG
AAGTTGCCATTCGTGTAATTATTTCTAACATTGCACAATCTGCTGCGAGATGGAACAAAG
GTATTAAAGTTGAACTTTGTGCATCTGTAGAGCCAGGGTTTACTGTTGTATGTAGAGTGC
TACGTGGACCAAAACATGGCGATATTTCAACCTCATCTATTCAGTTGTTAGAGCACTGTC
AATTATGTCAAGCCAGAAGGTTTAAACCAAGAACAAAATATATTACTTATGGAAATGGTA
AGACACTATGTAAGTGCAGCACTGAAGAAGCAGCAGCCCCATTATTATTACTGGGCCCCA
TGTGGTCAGGCAGCATTTTTCAACCAGAATTTGTTTTGAAAACCTGTTTAACTGCCAAGC
AGATGAATTTGTCTCTTGAACATCGGAAAATTTTAGAACTGATTTTGTTGGAAAGTGTGT
GTTGCAAAACTAATGAAGAAGAAGAGAACTTACTGAAACACACAACTCAATTTAATGGTA
AAAATCAACTTAACGAAAAAAGTGAACCAAAGCACAAAAAAATAAAATTAGACTCCGAAG
TAAGTTCAGAGAATGGCCCTTCTTTAACCAAAGAGATGAGATCCTACAAACATATTCCAT
TTTATTGTGATTTCCAACATCACAGTGTAAAAGGAGGTAATCCTCCAAGATTATTGACCG
TGCTGAATGAACTACGCAGTCGAGGTTACAACGCAAGCAAAACTCATTTCGGCCCAAGAT
GCATAAGAACATCAGCCAGTGTGGAACAGTTTGATGAAATTTTAAAGCATTTGTGGGAAG
TAACGACAAAACATAATGGAATCAAAGTCTAAGAATTTCTAGTGTGTTCTTAAATTGATA
AAAAAAGTTGAAAATTTTCAGTATAAACGTAGTAGCCAATATATGTGAGACGATTGCCAG
ATATTTCATGTTTTTTTTGCACCCAGGATGGAATGTAAAAACTGTTTTCTGTTTCTGTTG
AAAAGAACTATAAAACTTGTTTTGACAGTGACACTTTACTATACAAACGCAAATTAAATA
GCTGGGTGGGGATAACTGATACCTACATTAGTTAAGCACTAGCTTTGTTGGAACTAATGA
ATTTTTTTGTTGTTTATTACTGGTATTTAAATAATGTTTTTATTGTTTTAGAACATGATA
TATTCAATATAGGCGCCAAACCATTTAAAATGCAGGGAGGGTAGAAATAGTTAGATTTCT
AAACTTGTTGAGAAAAAATCCAACATGGCTTTAATTTACTAATTAGTGCAAATTACAAAG
TAGGCCTGCCACCAGTGCCACCCCAGAATTGGCGCTTATGGTGTTTTATTATATATTTGA
ACCAAATGAACAAG

InterProScan

ProSiteProfiles
Trm1 (IPR002905) - T[1-446] 51.845
Pfam
Trm1 (IPR002905) - T[45-330] 1.7E-39 - T[397-446] 1.2E-5
PANTHER
Trm1 (IPR002905) - T[62-92] 3.7E-87 - T[111-451] 3.7E-87
SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[93-329] 5.98E-52 - T[387-447] 5.98E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRM1L_HUMAN 31.742 % 171 2.06E-46





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