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  1. Clone 'cien120744' > 
  2. Transcript 'KH2012:KH.C8.404.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.404.v1.A.nonSL5-1

Possible name(s)

TRMT1; TRMT1L

Gene model

KH2012:KH.C8.404

Location

KhC8 [4,628,578 / 4,631,297]

Sequences

Amino acid sequence

Length: 461

>KH.C8.404.v1.A.nonSL5-1
TIKMNLLNGKLVENNAEIPLVKSYEDVMSFKRVSKVCELGLSRAIALACLEIVKLETDGV
TSALDAVNSFGAAGMQWAKHFLSENISITVNTALGLDDVCKKWLNENNCPTDSVKVVSMD
PQVLMHSSKHKFVYLEVTGTVVPYLDAAVRSVNHNGLLCVTCTDTSTLYNKCPTTAQRLY
GANLLKNEYCKEVAIRVIISNIAQSAARWNKGIKVELCASVEPGFTVVCRVLRGPKHGDI
STSSIQLLEHCQLCQARRFKPRTKYITYGNGKTLCKCSTEEAAAPLLLLGPMWSGSIFQP
EFVLKTCLTAKQMNLSLEHRKILELILLESVCCKTNEEEENLLKHTTQFNGKNQLNEKSE
PKHKKIKLDSEVSSENGPSLTKEMRSYKHIPFYCDFQHHSVKGGNPPRLLTVLNELRSRG
YNASKTHFGPRCIRTSASVEQFDEILKHLWEVTTKHNGIKV

Nucleotide sequence

Length: 2,719

>KH2012:KH.C8.404.v1.A.nonSL5-1
GTTTTACAAAATTTCTAGAGTATTAGCAGAAGAAAAAATGGCGTTAACTGCCGAGACATT
AAAAGATAAACTGACAAAGGAGCTGAGTGCAGAATACGTGGATGTAAAGGACATTTCTCC
CGACATGTGTGGAACCAGTTTCCATGCTGTTGTTGTTTCGCCCCAGTTTGTGGGTAAAGC
TCGCTTGCAACAGCAGCGAATGGTTAACAATGCACTTGCTGAGGAGATGCCATCAATCCA
CGCTTTTACACAAAAGACATACACACCAGAAGCATGGAAAAAGGCAAACTCTACGGACTG
ATTATATTTCTGAGTTAATTTAAACAATATTTGTTTGACCATTATAAACGTTCAGATTTC
CTATAATTTTTTTTGCGTTATAAGGCCCATTATTGTGCAATGCATAAGGCCTGCTTTCTG
CACAGTTTTTACCAGACTGATTAGTTGTCAGTCTTGTCACTTTTAGAATATGAATAAAGT
CTGCATGGTTGGAAGTGGAATAATTCTCTTCAGATTAGTAACTCCATGTTTTTATAATCA
CAAAAAGCTATTGAGTTAGTACATGTACATGATAACATTTTATAAAGAAATTTAACCTAA
AACGTTGGAATTGAAGGCATATTATTCAAACTATTTATATCTATTTATGACAAATTTAAT
TTCTGAATTCTGATTATAAGGTTTTGTTTGATTATGATATGCTTGTGGAGTAAACAATAT
TGTTTTGTTACTTTAGAAAAAAAATACATGTATATATGATTTTTTATATAATCAGCTCTA
TTGAGACTATTGCTATTTATCAATTTTTTAAACAATTAAAATGAATCTTCTAAATGGAAA
ATTAGTTGAAAACAACGCTGAGATTCCTCTGGTCAAATCATATGAAGATGTTATGAGTTT
TAAACGTGTTTCAAAAGTCTGTGAGCTTGGACTCAGTCGTGCCATTGCTTTGGCTTGCTT
AGAAATCGTAAAACTTGAAACTGATGGAGTTACATCAGCTCTTGATGCTGTTAACTCTTT
TGGTGCTGCTGGCATGCAATGGGCAAAGCATTTTCTCTCAGAAAACATTTCCATCACTGT
AAACACAGCACTTGGACTGGATGATGTCTGTAAGAAATGGCTGAATGAGAATAACTGCCC
AACTGATTCTGTTAAGGTTGTGTCTATGGATCCCCAGGTTCTTATGCACAGCTCCAAACA
CAAGTTTGTGTATTTAGAAGTGACTGGAACAGTTGTGCCTTACCTTGATGCTGCTGTTCG
TAGTGTAAACCACAATGGTTTGTTGTGTGTGACTTGTACAGATACTTCAACTTTATACAA
CAAGTGCCCAACTACAGCCCAACGTCTCTACGGAGCCAATCTGTTAAAAAATGAATATTG
CAAAGAAGTTGCCATTCGTGTAATTATTTCTAACATTGCACAATCTGCTGCGAGATGGAA
CAAAGGTATTAAAGTTGAACTTTGTGCATCTGTAGAGCCAGGGTTTACTGTTGTATGTAG
AGTGCTACGTGGACCAAAACATGGCGATATTTCAACCTCATCTATTCAGTTGTTAGAGCA
CTGTCAATTATGTCAAGCCAGAAGGTTTAAACCAAGAACAAAATATATTACTTATGGAAA
TGGTAAGACACTATGTAAGTGCAGCACTGAAGAAGCAGCAGCCCCATTATTATTACTGGG
CCCCATGTGGTCAGGCAGCATTTTTCAACCAGAATTTGTTTTGAAAACCTGTTTAACTGC
CAAGCAGATGAATTTGTCTCTTGAACATCGGAAAATTTTAGAACTGATTTTGTTGGAAAG
TGTGTGTTGCAAAACTAATGAAGAAGAAGAGAACTTACTGAAACACACAACTCAATTTAA
TGGTAAAAATCAACTTAACGAAAAAAGTGAACCAAAGCACAAAAAAATAAAATTAGACTC
CGAAGTAAGTTCAGAGAATGGCCCTTCTTTAACCAAAGAGATGAGATCCTACAAACATAT
TCCATTTTATTGTGATTTCCAACATCACAGTGTAAAAGGAGGTAATCCTCCAAGATTATT
GACCGTGCTGAATGAACTACGCAGTCGAGGTTACAACGCAAGCAAAACTCATTTCGGCCC
AAGATGCATAAGAACATCAGCCAGTGTGGAACAGTTTGATGAAATTTTAAAGCATTTGTG
GGAAGTAACGACAAAACATAATGGAATCAAAGTCTAAGAATTTCTAGTGTGTTCTTAAAT
TGATAAAAAAAGTTGAAAATTTTCAGTATAAACGTAGTAGCCAATATATGTGAGACGATT
GCCAGATATTTCATGTTTTTTTTGCACCCAGGATGGAATGTAAAAACTGTTTTCTGTTTC
TGTTGAAAAGAACTATAAAACTTGTTTTGACAGTGACACTTTACTATACAAACGCAAATT
AAATAGCTGGGTGGGGATAACTGATACCTACATTAGTTAAGCACTAGCTTTGTTGGAACT
AATGAATTTTTTTGTTGTTTATTACTGGTATTTAAATAATGTTTTTATTGTTTTAGAACA
TGATATATTCAATATAGGCGCCAAACCATTTAAAATGCAGGGAGGGTAGAAATAGTTAGA
TTTCTAAACTTGTTGAGAAAAAATCCAACATGGCTTTAATTTACTAATTAGTGCAAATTA
CAAAGTAGGCCTGCCACCAGTGCCACCCCAGAATTGGCGCTTATGGTGTTTTATTATATA
TTTGAACCAAATGAACAAG

InterProScan

ProSiteProfiles
Trm1 (IPR002905) - T[1-446] 51.845
Pfam
Trm1 (IPR002905) - T[45-330] 1.7E-39 - T[397-446] 1.2E-5
PANTHER
Trm1 (IPR002905) - T[62-92] 3.7E-87 - T[111-451] 3.7E-87
SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[93-329] 5.98E-52 - T[387-447] 5.98E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRM1L_HUMAN 31.742 % 171 2.06E-46