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  1. Transcript 'KH2012:KH.C8.404.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.404.v1.A.SL11-1

Possible name(s)

TRMT1; TRMT1L

Gene model

KH2012:KH.C8.404

Location

KhC8 [4,629,353 / 4,631,297]

Sequences

Amino acid sequence

Length: 461

>KH.C8.404.v1.A.SL11-1
TIKMNLLNGKLVENNAEIPLVKSYEDVMSFKRVSKVCELGLSRAIALACLEIVKLETDGV
TSALDAVNSFGAAGMQWAKHFLSENISITVNTALGLDDVCKKWLNENNCPTDSVKVVSMD
PQVLMHSSKHKFVYLEVTGTVVPYLDAAVRSVNHNGLLCVTCTDTSTLYNKCPTTAQRLY
GANLLKNEYCKEVAIRVIISNIAQSAARWNKGIKVELCASVEPGFTVVCRVLRGPKHGDI
STSSIQLLEHCQLCQARRFKPRTKYITYGNGKTLCKCSTEEAAAPLLLLGPMWSGSIFQP
EFVLKTCLTAKQMNLSLEHRKILELILLESVCCKTNEEEENLLKHTTQFNGKNQLNEKSE
PKHKKIKLDSEVSSENGPSLTKEMRSYKHIPFYCDFQHHSVKGGNPPRLLTVLNELRSRG
YNASKTHFGPRCIRTSASVEQFDEILKHLWEVTTKHNGIKV

Nucleotide sequence

Length: 1,944

>KH2012:KH.C8.404.v1.A.SL11-1
CTCTATTGAGACTATTGCTATTTATCAATTTTTTAAACAATTAAAATGAATCTTCTAAAT
GGAAAATTAGTTGAAAACAACGCTGAGATTCCTCTGGTCAAATCATATGAAGATGTTATG
AGTTTTAAACGTGTTTCAAAAGTCTGTGAGCTTGGACTCAGTCGTGCCATTGCTTTGGCT
TGCTTAGAAATCGTAAAACTTGAAACTGATGGAGTTACATCAGCTCTTGATGCTGTTAAC
TCTTTTGGTGCTGCTGGCATGCAATGGGCAAAGCATTTTCTCTCAGAAAACATTTCCATC
ACTGTAAACACAGCACTTGGACTGGATGATGTCTGTAAGAAATGGCTGAATGAGAATAAC
TGCCCAACTGATTCTGTTAAGGTTGTGTCTATGGATCCCCAGGTTCTTATGCACAGCTCC
AAACACAAGTTTGTGTATTTAGAAGTGACTGGAACAGTTGTGCCTTACCTTGATGCTGCT
GTTCGTAGTGTAAACCACAATGGTTTGTTGTGTGTGACTTGTACAGATACTTCAACTTTA
TACAACAAGTGCCCAACTACAGCCCAACGTCTCTACGGAGCCAATCTGTTAAAAAATGAA
TATTGCAAAGAAGTTGCCATTCGTGTAATTATTTCTAACATTGCACAATCTGCTGCGAGA
TGGAACAAAGGTATTAAAGTTGAACTTTGTGCATCTGTAGAGCCAGGGTTTACTGTTGTA
TGTAGAGTGCTACGTGGACCAAAACATGGCGATATTTCAACCTCATCTATTCAGTTGTTA
GAGCACTGTCAATTATGTCAAGCCAGAAGGTTTAAACCAAGAACAAAATATATTACTTAT
GGAAATGGTAAGACACTATGTAAGTGCAGCACTGAAGAAGCAGCAGCCCCATTATTATTA
CTGGGCCCCATGTGGTCAGGCAGCATTTTTCAACCAGAATTTGTTTTGAAAACCTGTTTA
ACTGCCAAGCAGATGAATTTGTCTCTTGAACATCGGAAAATTTTAGAACTGATTTTGTTG
GAAAGTGTGTGTTGCAAAACTAATGAAGAAGAAGAGAACTTACTGAAACACACAACTCAA
TTTAATGGTAAAAATCAACTTAACGAAAAAAGTGAACCAAAGCACAAAAAAATAAAATTA
GACTCCGAAGTAAGTTCAGAGAATGGCCCTTCTTTAACCAAAGAGATGAGATCCTACAAA
CATATTCCATTTTATTGTGATTTCCAACATCACAGTGTAAAAGGAGGTAATCCTCCAAGA
TTATTGACCGTGCTGAATGAACTACGCAGTCGAGGTTACAACGCAAGCAAAACTCATTTC
GGCCCAAGATGCATAAGAACATCAGCCAGTGTGGAACAGTTTGATGAAATTTTAAAGCAT
TTGTGGGAAGTAACGACAAAACATAATGGAATCAAAGTCTAAGAATTTCTAGTGTGTTCT
TAAATTGATAAAAAAAGTTGAAAATTTTCAGTATAAACGTAGTAGCCAATATATGTGAGA
CGATTGCCAGATATTTCATGTTTTTTTTGCACCCAGGATGGAATGTAAAAACTGTTTTCT
GTTTCTGTTGAAAAGAACTATAAAACTTGTTTTGACAGTGACACTTTACTATACAAACGC
AAATTAAATAGCTGGGTGGGGATAACTGATACCTACATTAGTTAAGCACTAGCTTTGTTG
GAACTAATGAATTTTTTTGTTGTTTATTACTGGTATTTAAATAATGTTTTTATTGTTTTA
GAACATGATATATTCAATATAGGCGCCAAACCATTTAAAATGCAGGGAGGGTAGAAATAG
TTAGATTTCTAAACTTGTTGAGAAAAAATCCAACATGGCTTTAATTTACTAATTAGTGCA
AATTACAAAGTAGGCCTGCCACCAGTGCCACCCCAGAATTGGCGCTTATGGTGTTTTATT
ATATATTTGAACCAAATGAACAAG

InterProScan

ProSiteProfiles
Trm1 (IPR002905) - T[1-446] 51.845
Pfam
Trm1 (IPR002905) - T[45-330] 1.7E-39 - T[397-446] 1.2E-5
PANTHER
Trm1 (IPR002905) - T[62-92] 3.7E-87 - T[111-451] 3.7E-87
SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[93-329] 5.98E-52 - T[387-447] 5.98E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRM1L_HUMAN 31.742 % 171 2.06E-46