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TRANSCRIPT CARD

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  1. Clone 'cien32144' > 
  2. Transcript 'KH2012:KH.C9.606.v1....' > 
  3. Transcript 'Boleac.CG.SB_v3.S8.g...' > 
  4. Clone 'cien85785' > 
  5. Transcript 'KH2012:KH.C8.404.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.404.v1.A.SL2-1

Possible name(s)

TRMT1; TRMT1L

Gene model

KH2012:KH.C8.404

Location

KhC8 [4,629,423 / 4,631,297]

Sequences

Amino acid sequence

Length: 449

>KH.C8.404.v1.A.SL2-1
ENNAEIPLVKSYEDVMSFKRVSKVCELGLSRAIALACLEIVKLETDGVTSALDAVNSFGA
AGMQWAKHFLSENISITVNTALGLDDVCKKWLNENNCPTDSVKVVSMDPQVLMHSSKHKF
VYLEVTGTVVPYLDAAVRSVNHNGLLCVTCTDTSTLYNKCPTTAQRLYGANLLKNEYCKE
VAIRVIISNIAQSAARWNKGIKVELCASVEPGFTVVCRVLRGPKHGDISTSSIQLLEHCQ
LCQARRFKPRTKYITYGNGKTLCKCSTEEAAAPLLLLGPMWSGSIFQPEFVLKTCLTAKQ
MNLSLEHRKILELILLESVCCKTNEEEENLLKHTTQFNGKNQLNEKSEPKHKKIKLDSEV
SSENGPSLTKEMRSYKHIPFYCDFQHHSVKGGNPPRLLTVLNELRSRGYNASKTHFGPRC
IRTSASVEQFDEILKHLWEVTTKHNGIKV

Nucleotide sequence

Length: 1,874

>KH2012:KH.C8.404.v1.A.SL2-1
TTGAAAACAACGCTGAGATTCCTCTGGTCAAATCATATGAAGATGTTATGAGTTTTAAAC
GTGTTTCAAAAGTCTGTGAGCTTGGACTCAGTCGTGCCATTGCTTTGGCTTGCTTAGAAA
TCGTAAAACTTGAAACTGATGGAGTTACATCAGCTCTTGATGCTGTTAACTCTTTTGGTG
CTGCTGGCATGCAATGGGCAAAGCATTTTCTCTCAGAAAACATTTCCATCACTGTAAACA
CAGCACTTGGACTGGATGATGTCTGTAAGAAATGGCTGAATGAGAATAACTGCCCAACTG
ATTCTGTTAAGGTTGTGTCTATGGATCCCCAGGTTCTTATGCACAGCTCCAAACACAAGT
TTGTGTATTTAGAAGTGACTGGAACAGTTGTGCCTTACCTTGATGCTGCTGTTCGTAGTG
TAAACCACAATGGTTTGTTGTGTGTGACTTGTACAGATACTTCAACTTTATACAACAAGT
GCCCAACTACAGCCCAACGTCTCTACGGAGCCAATCTGTTAAAAAATGAATATTGCAAAG
AAGTTGCCATTCGTGTAATTATTTCTAACATTGCACAATCTGCTGCGAGATGGAACAAAG
GTATTAAAGTTGAACTTTGTGCATCTGTAGAGCCAGGGTTTACTGTTGTATGTAGAGTGC
TACGTGGACCAAAACATGGCGATATTTCAACCTCATCTATTCAGTTGTTAGAGCACTGTC
AATTATGTCAAGCCAGAAGGTTTAAACCAAGAACAAAATATATTACTTATGGAAATGGTA
AGACACTATGTAAGTGCAGCACTGAAGAAGCAGCAGCCCCATTATTATTACTGGGCCCCA
TGTGGTCAGGCAGCATTTTTCAACCAGAATTTGTTTTGAAAACCTGTTTAACTGCCAAGC
AGATGAATTTGTCTCTTGAACATCGGAAAATTTTAGAACTGATTTTGTTGGAAAGTGTGT
GTTGCAAAACTAATGAAGAAGAAGAGAACTTACTGAAACACACAACTCAATTTAATGGTA
AAAATCAACTTAACGAAAAAAGTGAACCAAAGCACAAAAAAATAAAATTAGACTCCGAAG
TAAGTTCAGAGAATGGCCCTTCTTTAACCAAAGAGATGAGATCCTACAAACATATTCCAT
TTTATTGTGATTTCCAACATCACAGTGTAAAAGGAGGTAATCCTCCAAGATTATTGACCG
TGCTGAATGAACTACGCAGTCGAGGTTACAACGCAAGCAAAACTCATTTCGGCCCAAGAT
GCATAAGAACATCAGCCAGTGTGGAACAGTTTGATGAAATTTTAAAGCATTTGTGGGAAG
TAACGACAAAACATAATGGAATCAAAGTCTAAGAATTTCTAGTGTGTTCTTAAATTGATA
AAAAAAGTTGAAAATTTTCAGTATAAACGTAGTAGCCAATATATGTGAGACGATTGCCAG
ATATTTCATGTTTTTTTTGCACCCAGGATGGAATGTAAAAACTGTTTTCTGTTTCTGTTG
AAAAGAACTATAAAACTTGTTTTGACAGTGACACTTTACTATACAAACGCAAATTAAATA
GCTGGGTGGGGATAACTGATACCTACATTAGTTAAGCACTAGCTTTGTTGGAACTAATGA
ATTTTTTTGTTGTTTATTACTGGTATTTAAATAATGTTTTTATTGTTTTAGAACATGATA
TATTCAATATAGGCGCCAAACCATTTAAAATGCAGGGAGGGTAGAAATAGTTAGATTTCT
AAACTTGTTGAGAAAAAATCCAACATGGCTTTAATTTACTAATTAGTGCAAATTACAAAG
TAGGCCTGCCACCAGTGCCACCCCAGAATTGGCGCTTATGGTGTTTTATTATATATTTGA
ACCAAATGAACAAG

InterProScan

ProSiteProfiles
Trm1 (IPR002905) - T[1-434] 51.823
Pfam
Trm1 (IPR002905) - T[33-318] 2.0E-39 - T[383-434] 1.1E-5
PANTHER
Trm1 (IPR002905) - T[50-80] 3.3E-87 - T[99-439] 3.3E-87
SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[81-317] 5.48E-52 - T[375-435] 5.48E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRM1L_HUMAN 31.742 % 171 1.34E-46