Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Cisavi.CG.ENS81.R51....' > 
  2. Transcript 'KH2012:KH.L28.8.v1.A...' > 
  3. Transcript 'KH2012:KH.S391.6.v1....' > 
  4. Transcript 'KH2012:KH.C11.577.v1...' > 
  5. Transcript 'KH2012:KH.C8.404.v1....'

Transcript Model

Transcript Id

KH2012:KH.C8.404.v1.A.SL6-1

Possible name(s)

TRMT1; TRMT1L

Gene model

KH2012:KH.C8.404

Location

KhC8 [4,629,314 / 4,631,297]

Sequences

Amino acid sequence

Length: 461

>KH.C8.404.v1.A.SL6-1
TIKMNLLNGKLVENNAEIPLVKSYEDVMSFKRVSKVCELGLSRAIALACLEIVKLETDGV
TSALDAVNSFGAAGMQWAKHFLSENISITVNTALGLDDVCKKWLNENNCPTDSVKVVSMD
PQVLMHSSKHKFVYLEVTGTVVPYLDAAVRSVNHNGLLCVTCTDTSTLYNKCPTTAQRLY
GANLLKNEYCKEVAIRVIISNIAQSAARWNKGIKVELCASVEPGFTVVCRVLRGPKHGDI
STSSIQLLEHCQLCQARRFKPRTKYITYGNGKTLCKCSTEEAAAPLLLLGPMWSGSIFQP
EFVLKTCLTAKQMNLSLEHRKILELILLESVCCKTNEEEENLLKHTTQFNGKNQLNEKSE
PKHKKIKLDSEVSSENGPSLTKEMRSYKHIPFYCDFQHHSVKGGNPPRLLTVLNELRSRG
YNASKTHFGPRCIRTSASVEQFDEILKHLWEVTTKHNGIKV

Nucleotide sequence

Length: 1,983

>KH2012:KH.C8.404.v1.A.SL6-1
AAAAAAAATACATGTATATATGATTTTTTATATAATCAGCTCTATTGAGACTATTGCTAT
TTATCAATTTTTTAAACAATTAAAATGAATCTTCTAAATGGAAAATTAGTTGAAAACAAC
GCTGAGATTCCTCTGGTCAAATCATATGAAGATGTTATGAGTTTTAAACGTGTTTCAAAA
GTCTGTGAGCTTGGACTCAGTCGTGCCATTGCTTTGGCTTGCTTAGAAATCGTAAAACTT
GAAACTGATGGAGTTACATCAGCTCTTGATGCTGTTAACTCTTTTGGTGCTGCTGGCATG
CAATGGGCAAAGCATTTTCTCTCAGAAAACATTTCCATCACTGTAAACACAGCACTTGGA
CTGGATGATGTCTGTAAGAAATGGCTGAATGAGAATAACTGCCCAACTGATTCTGTTAAG
GTTGTGTCTATGGATCCCCAGGTTCTTATGCACAGCTCCAAACACAAGTTTGTGTATTTA
GAAGTGACTGGAACAGTTGTGCCTTACCTTGATGCTGCTGTTCGTAGTGTAAACCACAAT
GGTTTGTTGTGTGTGACTTGTACAGATACTTCAACTTTATACAACAAGTGCCCAACTACA
GCCCAACGTCTCTACGGAGCCAATCTGTTAAAAAATGAATATTGCAAAGAAGTTGCCATT
CGTGTAATTATTTCTAACATTGCACAATCTGCTGCGAGATGGAACAAAGGTATTAAAGTT
GAACTTTGTGCATCTGTAGAGCCAGGGTTTACTGTTGTATGTAGAGTGCTACGTGGACCA
AAACATGGCGATATTTCAACCTCATCTATTCAGTTGTTAGAGCACTGTCAATTATGTCAA
GCCAGAAGGTTTAAACCAAGAACAAAATATATTACTTATGGAAATGGTAAGACACTATGT
AAGTGCAGCACTGAAGAAGCAGCAGCCCCATTATTATTACTGGGCCCCATGTGGTCAGGC
AGCATTTTTCAACCAGAATTTGTTTTGAAAACCTGTTTAACTGCCAAGCAGATGAATTTG
TCTCTTGAACATCGGAAAATTTTAGAACTGATTTTGTTGGAAAGTGTGTGTTGCAAAACT
AATGAAGAAGAAGAGAACTTACTGAAACACACAACTCAATTTAATGGTAAAAATCAACTT
AACGAAAAAAGTGAACCAAAGCACAAAAAAATAAAATTAGACTCCGAAGTAAGTTCAGAG
AATGGCCCTTCTTTAACCAAAGAGATGAGATCCTACAAACATATTCCATTTTATTGTGAT
TTCCAACATCACAGTGTAAAAGGAGGTAATCCTCCAAGATTATTGACCGTGCTGAATGAA
CTACGCAGTCGAGGTTACAACGCAAGCAAAACTCATTTCGGCCCAAGATGCATAAGAACA
TCAGCCAGTGTGGAACAGTTTGATGAAATTTTAAAGCATTTGTGGGAAGTAACGACAAAA
CATAATGGAATCAAAGTCTAAGAATTTCTAGTGTGTTCTTAAATTGATAAAAAAAGTTGA
AAATTTTCAGTATAAACGTAGTAGCCAATATATGTGAGACGATTGCCAGATATTTCATGT
TTTTTTTGCACCCAGGATGGAATGTAAAAACTGTTTTCTGTTTCTGTTGAAAAGAACTAT
AAAACTTGTTTTGACAGTGACACTTTACTATACAAACGCAAATTAAATAGCTGGGTGGGG
ATAACTGATACCTACATTAGTTAAGCACTAGCTTTGTTGGAACTAATGAATTTTTTTGTT
GTTTATTACTGGTATTTAAATAATGTTTTTATTGTTTTAGAACATGATATATTCAATATA
GGCGCCAAACCATTTAAAATGCAGGGAGGGTAGAAATAGTTAGATTTCTAAACTTGTTGA
GAAAAAATCCAACATGGCTTTAATTTACTAATTAGTGCAAATTACAAAGTAGGCCTGCCA
CCAGTGCCACCCCAGAATTGGCGCTTATGGTGTTTTATTATATATTTGAACCAAATGAAC
AAG

InterProScan

ProSiteProfiles
Trm1 (IPR002905) - T[1-446] 51.845
Pfam
Trm1 (IPR002905) - T[45-330] 1.7E-39 - T[397-446] 1.2E-5
PANTHER
Trm1 (IPR002905) - T[62-92] 3.7E-87 - T[111-451] 3.7E-87
SUPERFAMILY
SAM-dependent_MTases (IPR029063) - T[93-329] 5.98E-52 - T[387-447] 5.98E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TRM1L_HUMAN 31.742 % 171 2.06E-46