- Transcript 'KH2012:KH.C9.385.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.385.v1.A.nonSL2-1
Possible name(s)
SMYD1; SMYD2; SMYD3
Gene model
Location
KhC9 [5,813,428 / 5,815,223]
Amino acid sequence
Length: 430
>KH.C9.385.v1.A.nonSL2-1
MDVNVELFTSEKSGRGLKAKRNLNPGSTVLSSEPYAYLLSKKQKGVYCDFCFKKQDGLLQ
CSGCKYMKYCNRNCQKMAWNEHHKAECPALKNVMPKRPPDFVILLGRLLWNMQQYSSAKL
PEKNSILDLESNYNKLSQNQKEALMNFLVILHTFWSPKPLPPQVTDNKMLLELCARIKNN
SFAICNEELQSDVGTGVYLNCSFINHSCEPNCVAEFNMRTLKIRAVKNITAGEEVLISYV
DLFATSFERQRELMSIYHFQCTCHSCNAKTDDDQMMQDFDGKITESKLSSVKDMLSQMEE
LRKQCDYQKIKDLVEGCVKRKILPHENIYMAKVLDFGMDACIELGVLTQAFEFGSMALFS
YKLYLHANHPMLGIQLMKLGKILLHEEKNQDAMQFLREAFKILTITHSPNSSVLTELQNL
LGQCLAEMQN
Nucleotide sequence
Length: 1,795
>KH2012:KH.C9.385.v1.A.nonSL2-1
ATTAATTCTGCTGTGTGATTTGTTTACTGTCGCGAGCCACAATCTGAACTTGCGTTATTT
TAAAATTAATTTTAAAACAGAGAACACCCGGTTTGTTATCTCAGGGGAAGAACGGTTAAA
TTTGACGGGAAAGTAGGCAACATCCATAATTACCGTATCATCGTTACGCATATAGAGTAA
ACAACCCGGTAGTTATAGTGGCGGGAACATAACGTTATTCCTCGAAAGTGCAAAGGTTGT
TTAAATGGATGTAAATGTGGAACTTTTCACTTCTGAAAAGAGCGGACGCGGTCTAAAAGC
AAAGCGTAATTTAAACCCAGGTTCTACTGTTCTTTCATCCGAGCCATATGCATATTTGCT
ATCGAAAAAGCAAAAAGGCGTTTATTGCGATTTTTGTTTCAAAAAGCAAGATGGTCTGTT
GCAATGTTCTGGATGCAAATATATGAAATACTGCAACAGAAACTGCCAGAAAATGGCCTG
GAATGAACACCACAAAGCAGAGTGCCCCGCACTGAAAAACGTAATGCCAAAAAGACCACC
AGATTTTGTCATTTTACTTGGAAGGTTGCTATGGAATATGCAGCAGTACAGCAGTGCCAA
ATTACCAGAGAAAAATTCGATTTTGGATTTAGAGTCAAATTATAATAAATTGTCGCAAAA
CCAAAAAGAGGCCTTGATGAATTTCCTTGTTATTTTACATACATTTTGGAGCCCAAAACC
TCTTCCACCTCAAGTTACCGATAACAAAATGCTGTTGGAATTATGTGCTAGAATTAAAAA
TAACAGTTTTGCTATATGCAATGAAGAGCTGCAGTCGGATGTTGGCACTGGCGTGTATCT
CAATTGCAGCTTCATAAACCATAGTTGTGAGCCAAATTGTGTTGCAGAGTTTAACATGCG
GACATTGAAAATAAGGGCAGTGAAAAATATAACTGCGGGGGAAGAAGTCCTGATAAGTTA
TGTCGATTTGTTTGCTACTAGCTTTGAAAGACAACGAGAACTAATGAGTATTTACCATTT
TCAATGCACTTGTCATTCTTGCAATGCTAAAACTGATGATGATCAAATGATGCAGGACTT
TGATGGAAAAATAACAGAATCAAAACTATCTTCTGTAAAAGACATGTTGAGTCAAATGGA
GGAGTTAAGAAAACAATGTGATTATCAGAAAATAAAAGACCTTGTGGAGGGTTGTGTAAA
AAGGAAAATACTGCCACATGAGAATATATACATGGCAAAAGTTTTGGATTTTGGCATGGA
TGCTTGCATTGAACTAGGTGTTTTGACACAGGCATTTGAGTTTGGTTCCATGGCTTTATT
TAGCTACAAATTATATTTACATGCAAACCATCCTATGCTGGGCATACAACTTATGAAACT
CGGAAAAATTTTACTCCATGAGGAAAAAAATCAAGACGCTATGCAATTTTTGCGTGAAGC
ATTTAAAATTCTCACTATAACACATTCGCCAAACAGCTCTGTTTTAACGGAGCTACAAAA
TTTACTGGGCCAATGTTTAGCAGAAATGCAAAACTAAAAAAATTTTTGGACTGATAATAA
ATGATGGCTAGTCTCATTTTAATTGATTGTGTTCAATTTTAAATGATGTTTACGTAATCA
AATTGTCAGCAGACTAAAACAAACACTAGTAAAACCAACACATGCTGTATTATTACGCAA
CCGAATTACCTGTTTAAACATCATGAGAATTTAAAGCAGGGTTGATACACAAACCCAATA
ATGCATGCCCACACTGTGTTGCATGTACACTGTTGCAGTTTTTTTACATTTTTAG
| ProSiteProfiles |
SET_dom (IPR001214) - T[3-240] 14.812 |
| SMART |
SET_dom (IPR001214) - T[3-246] 1.7E-9 |
| Pfam |
SET_dom (IPR001214) - T[14-239] 4.1E-13 |
| ProSitePatterns |
Znf_MYND (IPR002893) - T[48-87] . |
| Pfam |
Znf_MYND (IPR002893) - T[48-87] 2.0E-8 |
| ProSiteProfiles |
Znf_MYND (IPR002893) - T[48-87] 11.551 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[358-430] 1.1E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMYD3_HUMAN | 37.89 % | 293 | 1.53E-95 |
| SMYD1_HUMAN | 27.171 % | 196 | 2.02E-57 |
| SMYD2_HUMAN | 28.103 % | 185 | 4.78E-54 |