- Transcript 'KH2012:KH.C1.488.v1....' >
- Transcript 'KH2012:KH.L23.1.v2.A...' >
- Transcript 'Cisavi.CG.ENS81.R0.1...' >
- Transcript 'Moocci.CG.ELv1_2.S44...' >
- Transcript 'KH2012:KH.C9.385.v1....'
Transcript Model
Transcript Id
KH2012:KH.C9.385.v1.R.ND1-1
Possible name(s)
SMYD1; SMYD2; SMYD3
Gene model
Location
KhC9 [5,813,446 / 5,815,223]
Amino acid sequence
Length: 430
>KH.C9.385.v1.R.ND1-1
MDVNVELFTSEKSGRGLKAKRNLNPGSTVLSSEPYAYLLSKKQKGVYCDFCFKKQDGLLQ
CSGCKYMKYCNRNCQKMAWNEHHKAECPALKNVMPKRPPDFVILLGRLLWNMQQYSSAKL
PEKNSILDLESNYNKLSQNQKEALMNFLVILHTFWSPKPLPPQVTDNKMLLELCARIKNN
SFAICNEELQSDVGTGVYLNCSFINHSCEPNCVAEFNMRTLKIRAVKNITAGEEVLISYV
DLFATSFERQRELMSIYHFQCTCHSCNAKTDDDQMMQDFDGKITESKLSSVKDMLSQMEE
LRKQCDYQKIKDLVEGCVKRKILPHENIYMAKVLDFGMDACIELGVLTQAFEFGSMALFS
YKLYLHANHPMLGIQLMKLGKILLHEEKNQDAMQFLREAFKILTITHSPNSSVLTELQNL
LGQCLAEMQN
Nucleotide sequence
Length: 1,777
>KH2012:KH.C9.385.v1.R.ND1-1
TTTGTTTACTGTCGCGAGCCACAATCTGAACTTGCGTTATTTTAAAATTAATTTTAAAAC
AGAGAACACCCGGTTTGTTATCTCAGGGGAAGAACGGTTAAATTTGACGGGAAAGTAGGC
AACATCCATAATTACCGTATCATCGTTACGCATATAGAGTAAACAACCCGGTAGTTATAG
TGGCGGGAACATAACGTTATTCCTCGAAAGTGCAAAGGTTGTTTAAATGGATGTAAATGT
GGAACTTTTCACTTCTGAAAAGAGCGGACGCGGTCTAAAAGCAAAGCGTAATTTAAACCC
AGGTTCTACTGTTCTTTCATCCGAGCCATATGCATATTTGCTATCGAAAAAGCAAAAAGG
CGTTTATTGCGATTTTTGTTTCAAAAAGCAAGATGGTCTGTTGCAATGTTCTGGATGCAA
ATATATGAAATACTGCAACAGAAACTGCCAGAAAATGGCCTGGAATGAACACCACAAAGC
AGAGTGCCCCGCACTGAAAAACGTAATGCCAAAAAGACCACCAGATTTTGTCATTTTACT
TGGAAGGTTGCTATGGAATATGCAGCAGTACAGCAGTGCCAAATTACCAGAGAAAAATTC
GATTTTGGATTTAGAGTCAAATTATAATAAATTGTCGCAAAACCAAAAAGAGGCCTTGAT
GAATTTCCTTGTTATTTTACATACATTTTGGAGCCCAAAACCTCTTCCACCTCAAGTTAC
CGATAACAAAATGCTGTTGGAATTATGTGCTAGAATTAAAAATAACAGTTTTGCTATATG
CAATGAAGAGCTGCAGTCGGATGTTGGCACTGGCGTGTATCTCAATTGCAGCTTCATAAA
CCATAGTTGTGAGCCAAATTGTGTTGCAGAGTTTAACATGCGGACATTGAAAATAAGGGC
AGTGAAAAATATAACTGCGGGGGAAGAAGTCCTGATAAGTTATGTCGATTTGTTTGCTAC
TAGCTTTGAAAGACAACGAGAACTAATGAGTATTTACCATTTTCAATGCACTTGTCATTC
TTGCAATGCTAAAACTGATGATGATCAAATGATGCAGGACTTTGATGGAAAAATAACAGA
ATCAAAACTATCTTCTGTAAAAGACATGTTGAGTCAAATGGAGGAGTTAAGAAAACAATG
TGATTATCAGAAAATAAAAGACCTTGTGGAGGGTTGTGTAAAAAGGAAAATACTGCCACA
TGAGAATATATACATGGCAAAAGTTTTGGATTTTGGCATGGATGCTTGCATTGAACTAGG
TGTTTTGACACAGGCATTTGAGTTTGGTTCCATGGCTTTATTTAGCTACAAATTATATTT
ACATGCAAACCATCCTATGCTGGGCATACAACTTATGAAACTCGGAAAAATTTTACTCCA
TGAGGAAAAAAATCAAGACGCTATGCAATTTTTGCGTGAAGCATTTAAAATTCTCACTAT
AACACATTCGCCAAACAGCTCTGTTTTAACGGAGCTACAAAATTTACTGGGCCAATGTTT
AGCAGAAATGCAAAACTAAAAAAATTTTTGGACTGATAATAAATGATGGCTAGTCTCATT
TTAATTGATTGTGTTCAATTTTAAATGATGTTTACGTAATCAAATTGTCAGCAGACTAAA
ACAAACACTAGTAAAACCAACACATGCTGTATTATTACGCAACCGAATTACCTGTTTAAA
CATCATGAGAATTTAAAGCAGGGTTGATACACAAACCCAATAATGCATGCCCACACTGTG
TTGCATGTACACTGTTGCAGTTTTTTTACATTTTTAG
| ProSiteProfiles |
SET_dom (IPR001214) - T[3-240] 14.812 |
| SMART |
SET_dom (IPR001214) - T[3-246] 1.7E-9 |
| Pfam |
SET_dom (IPR001214) - T[14-239] 4.1E-13 |
| ProSitePatterns |
Znf_MYND (IPR002893) - T[48-87] . |
| Pfam |
Znf_MYND (IPR002893) - T[48-87] 2.0E-8 |
| ProSiteProfiles |
Znf_MYND (IPR002893) - T[48-87] 11.551 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[358-430] 1.1E-20 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMYD3_HUMAN | 37.89 % | 293 | 1.53E-95 |
| SMYD1_HUMAN | 27.171 % | 196 | 2.02E-57 |
| SMYD2_HUMAN | 28.103 % | 185 | 4.78E-54 |