Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L112.12.v1.A.SL2-1

Possible name(s)

CHSY1; CHSY3; CSGALNACT1

Gene model

KH2012:KH.L112.12

Location

KhL112 [163,507 / 168,017]

Sequences

Amino acid sequence

Length: 479

>KH.L112.12.v1.A.SL2-1
RNMSALKQIRNSQNVQFIFSFCVGWFVLGHFWTEEMDKAFKRGELNVQSYEEHCSCDHLA
PVCPPCNGVVDVQSQRQQNIKISESYYRTYKYKPLAHSEDLTNRWRMLTHKHQYEMINQE
PRVGLNGMWRVEVNQAEQQAKHIAIKNGAESSIEMKEIFQRVDAFHGTTYIVNYEAPDAA
RTVVEMNRPYIAGKPKLVSVDHVTNREIINIISPISKVSERFNNFLSRYEDNVLSSPSSG
PVRIIFVIFQPDDEHEVKYEDSVSHITDVLDKFRARNKRAMIEYIFTKGEFNRAVGLHAG
VMQCNDDEIVLFLDVDLKIGGDFLGRVRRNVVQHERAIFPIMFSQYDSDVMKHASTVDME
LVQDVEDPMQINKQTGFWIYYAFGVAAMYKSDYLKVGGFRLDIKGWGGEDVDLFKKMISD
PHINVMSIVDADLMHIYHKRGCDVTLAPDQYAMCVGAWAETLGSQRQVGTLYLNKHYEL

Nucleotide sequence

Length: 1,507

>KH2012:KH.L112.12.v1.A.SL2-1
TAGAAACATGTCGGCGTTAAAACAAATTAGAAATTCACAAAATGTTCAATTTATTTTCTC
GTTTTGCGTCGGTTGGTTTGTGCTCGGCCACTTTTGGACCGAAGAAATGGACAAAGCATT
CAAACGAGGAGAACTGAACGTCCAATCATACGAGGAGCATTGCTCATGTGACCACTTGGC
CCCCGTGTGTCCACCGTGCAACGGCGTCGTCGACGTGCAATCCCAACGGCAACAAAATAT
TAAAATATCGGAGAGTTATTACAGAACGTACAAATACAAGCCACTCGCCCACAGCGAGGA
TTTAACGAACCGTTGGCGAATGTTGACCCATAAACACCAGTATGAGATGATTAACCAGGA
ACCCCGGGTGGGGCTGAATGGGATGTGGAGGGTGGAAGTTAATCAAGCAGAACAACAAGC
TAAACATATCGCTATTAAGAATGGTGCTGAGTCATCGATTGAAATGAAGGAAATATTTCA
ACGAGTCGACGCTTTTCACGGAACGACGTATATTGTTAATTATGAGGCCCCCGACGCGGC
CCGCACAGTGGTTGAGATGAACCGACCGTACATTGCCGGCAAACCTAAGTTGGTATCAGT
CGATCATGTGACCAACAGGGAGATCATAAATATTATTTCACCAATTTCAAAGGTGAGCGA
GAGGTTCAACAACTTTTTATCGCGATACGAGGACAACGTGTTAAGTTCACCGTCGTCGGG
GCCCGTGAGGATTATCTTCGTTATTTTCCAACCCGACGATGAGCATGAGGTCAAATACGA
GGATTCTGTATCGCATATCACGGATGTCTTGGACAAGTTCCGTGCTCGAAACAAGAGAGC
AATGATTGAATATATTTTCACAAAGGGTGAATTCAACCGAGCTGTTGGGTTGCATGCGGG
GGTGATGCAGTGCAACGACGATGAAATAGTTTTGTTTCTCGACGTCGATCTGAAGATTGG
AGGAGATTTCTTGGGTCGGGTTCGTAGGAATGTGGTACAACATGAGAGGGCCATCTTTCC
CATCATGTTTTCGCAGTATGACAGCGACGTGATGAAACACGCATCAACGGTGGACATGGA
GTTGGTACAAGATGTTGAAGACCCCATGCAAATCAATAAACAAACTGGATTCTGGATTTA
TTATGCATTTGGTGTGGCTGCCATGTATAAAAGTGATTATCTTAAAGTTGGAGGGTTCAG
GTTGGATATCAAGGGTTGGGGGGGAGAGGACGTCGATTTATTCAAGAAGATGATCAGCGA
CCCCCACATAAATGTGATGTCTATTGTTGATGCCGACCTTATGCATATATATCATAAACG
TGGTTGTGATGTCACACTAGCACCCGACCAATACGCCATGTGTGTTGGTGCGTGGGCGGA
AACATTGGGCTCGCAACGACAAGTTGGAACGTTGTATTTGAACAAACATTATGAATTGTA
ATATTATTTTCGCATTTTATAATCACCCAGTATTGTGTTATATAATAATAAATAGAAACT
TACATTA

InterProScan

Pfam	Chond_GalNAc (IPR008428) - T[97-467] 1.3E-77
SUPERFAMILY	Nucleotide-diphossugar_trans (IPR029044) - T[241-253] 2.59E-18 - T[286-346] 2.59E-18 - T[376-460] 2.59E-18

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CHSS3_HUMAN	28.842 %	173	1.02E-46
CHSS1_HUMAN	26.591 %	157	3.43E-41
CGAT1_HUMAN	31.985 %	146	1.98E-38