- Molecular Tool 'Cirobu.Bra>MRFb (Izzi 2013)' >
- Transcript 'KH2012:KH.L112.9.v1....'
Transcript Model
Transcript Id
KH2012:KH.L112.9.v1.A.SL1-1
Possible name(s)
OSBPL10; OSBPL11; OSBPL9
Gene model
Location
KhL112 [154,855 / 160,005]
Amino acid sequence
Length: 695
>KH.L112.9.v1.A.SL1-1
WTGMEGLVQYQGKLSKYTNVVKGWQTRYFILNPQNGFLDYHVSESEAFGSNYRPRGSLPL
DGAVIAPSSEDSLAFSVNSSSGEVYKLKAADVKGRQEWITRLRAVSEHYTSQIAQEHPPL
ATKPRTRSVVSNISNNINKIKAHWLLTEHYIKDHVQQLSSNQPPATTPRPHPEPGDSPPS
RGRSLSRGSLTRNVGEVPTATKRYFNSSDLKQLQDARESIISVDNYHAGLVNMAAMFDLN
GPMSLDRDVLLLKATSNATIQALTTCHHILHKYHQYLISALPHDAEISWVNPKTDAIQPS
DDKDYDITMQQTKNAHEQPPLADPALEVEDVYVEPDEGLGAVDEHRNVIMHLLSQLKLGM
DLTKVTLPTFILEKRSLLEMYSDFGACTHMLLDICDGDSPVERMHRVLKFYLTSFQSGRR
GQTAKKPYNPILGETFQCSYHPIVDGEEHRVQFVAEQVSHHPPISAFFMSCPDKGIKLES
SIWTRSKFMNMSVGVMNVGEGILTLTPHNEVYTMTYPSAFARSILTVPWSELGGRCTIVC
EGTGMVANIMFHTKPAYGGQPHRVTAEVKDGTGVVTCRVQGKWNGELSFKYTMNPDAGEE
DVEGIDTTTLVATTKRVQPLDVQFPTESRRLWRNVTEALRKHDVTTATKYKEGLEEEQRK
LESWRGLSGASHQPTFFTKHKGKEVDCYKFKYMMS
Nucleotide sequence
Length: 2,370
>KH2012:KH.L112.9.v1.A.SL1-1
ATTATAGTGGACAGGTATGGAAGGGTTGGTTCAGTATCAGGGAAAACTGAGCAAATATAC
GAACGTGGTGAAGGGGTGGCAGACTAGGTATTTCATCCTAAACCCACAGAACGGGTTCCT
CGATTACCACGTGAGCGAGTCCGAGGCTTTCGGGTCAAATTATCGGCCGCGTGGTTCGTT
ACCACTGGATGGAGCAGTGATAGCACCAAGCAGCGAGGATTCGTTAGCTTTCTCCGTGAA
TTCATCAAGTGGTGAAGTTTATAAATTGAAAGCCGCTGATGTGAAGGGTCGACAGGAATG
GATTACTCGGTTACGAGCCGTGTCCGAACATTACACGTCGCAAATTGCTCAAGAGCACCC
TCCGCTGGCCACTAAGCCTCGAACTCGCTCGGTCGTCTCAAACATAAGTAACAACATCAA
TAAAATTAAAGCACATTGGTTGTTGACGGAACATTATATCAAAGACCACGTGCAACAATT
ATCCTCAAACCAACCACCCGCGACCACCCCACGACCCCACCCTGAACCTGGGGATTCCCC
CCCAAGTAGGGGTCGTTCGTTGAGTCGGGGGTCGCTCACCCGTAATGTGGGTGAGGTCCC
CACGGCAACGAAACGATATTTCAATTCATCGGATTTGAAACAATTGCAAGACGCTCGTGA
ATCAATCATCAGTGTTGACAACTACCATGCTGGGTTGGTGAATATGGCGGCCATGTTTGA
TCTCAATGGTCCCATGTCACTCGATCGGGATGTACTTCTCCTTAAAGCTACTTCGAACGC
AACGATACAAGCGTTAACGACGTGTCATCATATCCTACATAAATATCATCAATATTTAAT
ATCAGCTTTACCTCATGATGCTGAAATATCATGGGTTAATCCGAAGACAGATGCAATCCA
ACCGAGTGACGATAAAGATTATGACATCACAATGCAGCAGACGAAGAACGCACACGAGCA
ACCCCCCCTAGCGGATCCCGCCCTCGAGGTTGAAGATGTCTATGTCGAACCCGACGAGGG
GTTAGGAGCTGTGGACGAACATAGAAATGTTATAATGCACCTTTTGTCACAACTTAAACT
TGGGATGGACCTTACTAAGGTTACTCTCCCCACTTTTATATTGGAGAAACGTAGTTTGTT
GGAAATGTATTCGGACTTTGGGGCTTGCACCCATATGTTGCTTGATATATGTGATGGGGA
TTCCCCTGTGGAGAGAATGCATCGTGTGTTGAAATTTTATCTCACATCGTTTCAATCGGG
GAGGAGAGGTCAAACAGCCAAGAAACCGTACAACCCAATCCTTGGTGAAACATTCCAATG
TAGTTATCATCCCATAGTCGACGGGGAAGAGCATAGGGTGCAGTTTGTGGCCGAACAGGT
TTCCCACCACCCCCCTATTTCCGCCTTCTTCATGAGCTGCCCCGATAAAGGAATTAAATT
GGAGTCGAGTATTTGGACGAGATCGAAGTTCATGAATATGTCGGTTGGCGTGATGAACGT
GGGGGAAGGTATTCTGACCCTCACCCCCCACAACGAGGTGTACACGATGACATACCCATC
TGCATTCGCACGATCCATACTCACAGTACCGTGGTCAGAGTTGGGGGGAAGATGCACCAT
CGTATGCGAAGGAACGGGGATGGTCGCAAATATTATGTTTCATACCAAGCCTGCTTATGG
GGGGCAACCACACAGAGTGACAGCGGAAGTGAAAGATGGCACGGGTGTGGTTACGTGTCG
CGTGCAAGGGAAATGGAACGGAGAGCTTAGTTTCAAATATACGATGAACCCCGACGCAGG
TGAAGAGGATGTTGAAGGTATTGACACGACAACGTTGGTTGCCACAACTAAACGGGTACA
ACCCCTTGACGTTCAATTCCCAACCGAATCAAGGCGTTTGTGGAGAAACGTAACCGAAGC
TTTGCGTAAACACGACGTAACAACGGCCACCAAGTACAAAGAAGGATTGGAAGAGGAACA
ACGCAAGTTGGAATCTTGGAGGGGCCTGTCGGGGGCGTCGCACCAACCAACATTCTTTAC
CAAGCACAAGGGGAAGGAGGTGGATTGTTACAAGTTTAAATATATGATGTCATAATCACT
CATGATGATGTCACAATGACCCATGATGATGTCACAATGCCCTATGATGATGTCACAATG
ACCCATGATGATGTCACAATGCCCTATGATGATGTCACAAATCACAATGATGGTGTCACA
AGTGACAATACTCTAACAATACCATGTTATGTGCGGCATAATACTAACATTGCTTTTTAT
ATTTTATTGATGTTTGAAATATATTTGTGCGCCCCGCAGTTTGGTAATAATGTTTATTAT
TGAATCATTTGCAACAATTGACTGCATAAA
| Gene3D |
PH-like_dom_sf (IPR011993) - T[6-112] 1.3E-20 |
| ProSiteProfiles |
PH_domain (IPR001849) - T[7-107] 13.983 |
| Pfam |
PH_domain (IPR001849) - T[8-106] 2.3E-9 |
| SMART |
PH_domain (IPR001849) - T[8-109] 1.3E-13 |
| PANTHER |
Oxysterol-bd (IPR000648) - T[14-138] 1.0E-176 - T[152-441] 1.0E-176 - T[447-680] 1.0E-176 |
| SUPERFAMILY |
OSBP_sf (IPR037239) - T[344-690] 2.75E-102 |
| Pfam |
Oxysterol-bd (IPR000648) - T[351-690] 6.1E-73 |
| ProSitePatterns |
Oxysterol-bd_CS (IPR018494) - T[456-466] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| OSB10_HUMAN | 39.101 % | 465 | 2.2E-154 |
| OSB11_HUMAN | 39.891 % | 499 | 8.97E-168 |
| OSBL9_HUMAN | 50.298 % | 340 | 1.28E-106 |