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  1. Transcript 'KH2012:KH.L153.26.v3...'

Transcript Model

Transcript Id

KH2012:KH.L153.26.v3.R.ND1-1

Possible name(s)

ZNF208; ZNF729; ZNF850

Gene model

KH2012:KH.L153.26

Location

KhL153 [82,570 / 90,214]

Sequences

Amino acid sequence

Length: 954

>KH.L153.26.v3.R.ND1-1
KMSEVSSKSVPKKSNGKAKSKDNCCEYCDKVYKYPSLLVAHLRKHTGEKPFKCDVCGKSF
HTPAILKNHKRFHKEKKQFKCLKCEKSFHYISHLHAHEKVHTEEKPHKCEICDKNFKAKA
SLYRHMFIHYREKPYECKLCGKGFTDHKDFKIHYSGHNNIKQFKCNKCDKAYARQTELKV
HQRVHTGERPYTCNICDKSFSTNGVLKNHQIVHTGEKPFKCEICDKSFALYSTLSHHQAV
HNGERPYKCNICDKSFATNRNLKVHHLVHTGEKPFKCDICDKSFTANAGLTVHKFTHTGE
KPYKCNYCEKSFTSNGLLKNHHRTHTGEKPFKCAYCEKSFAANRSLRSHETIHTGEKAFQ
CKYCDKLFSLSGNLMMHQRMHTEEKPYKCEICDKSFKHNSNMYKHMSIHYREKPFECKLC
RKGFTERFDLIKHYTVHSKKPFKCSECYRAYYREADFIIHQRSHTEKKPYKCSLCDKSFP
SNSNLDRHMLLHYREKPYECKLCGKGFMQNKDLKAHYTQHKNMKPFKCDKCDKAYLQEAG
LIVHQRTHSGDKPFKCSACDKSFTSNSQLKSHQITHSGEKPFQCNICDKSFAAKPHHCLH
TRKRPYKCNICKKSFSGNSSLKIHQRTHTGEKPYICNICEKAFTTNGHLKSHQRMHTGEK
PYQCKLCEKSFAANRTLRDHQAVHTGKKAYQCNICERLFTTNSHLRDHQRLHSGQRPYKC
NLCEKAFTRSSNLKIHQKFHTGEKPYKCDLCERAFSASSNLKSHERTHTEEKSYKCSICE
KTFFTVSQIKSHGKVHTEDKQYKCDECGKYKPYKCNVCDKSFISNTVLKNHELIHTGEKP
YQCNICGKSFAKNSFLKGHQKVHTGEKPHQCNICDRSFSTNGILTRHHKVHTGEKPYQCE
ICQKSFSTTTKLKYHQRVHTGEKPYQCKTCMKRFSDKGNMKQHEQRRHLPKTSS

Nucleotide sequence

Length: 3,717

>KH2012:KH.L153.26.v3.R.ND1-1
GAGTTAGTTCCCTATTTAAACTAGTATTAGTTTTTTCTTAACTGTTAAACAAATTTTGAA
AAATGTCTGAAGTCAGTTCAAAGTCAGTGCCAAAGAAATCTAATGGTAAGGCTAAATCAA
AAGATAATTGCTGTGAATACTGTGACAAGGTGTATAAATATCCTTCCCTGCTTGTTGCTC
ACTTAAGAAAGCATACTGGAGAAAAACCTTTTAAGTGCGATGTCTGTGGAAAAAGTTTTC
ATACACCCGCAATTCTGAAAAATCACAAGAGATTTCATAAAGAAAAAAAGCAATTCAAAT
GCTTGAAATGTGAAAAATCATTCCACTATATTTCTCATCTACATGCACATGAAAAGGTAC
ATACAGAAGAGAAACCACACAAGTGTGAAATATGCGACAAAAACTTTAAGGCAAAAGCGA
GCTTGTATAGACATATGTTTATTCATTATAGGGAAAAACCTTATGAGTGTAAACTGTGCG
GAAAGGGTTTCACGGACCATAAAGATTTTAAAATACATTATTCCGGTCACAACAACATTA
AACAATTCAAGTGTAATAAATGTGATAAAGCCTATGCTCGGCAGACTGAATTAAAAGTTC
ACCAGCGTGTTCATACAGGAGAAAGACCATACACATGCAACATATGTGATAAATCGTTTT
CTACAAATGGTGTCTTAAAGAATCACCAAATCGTTCACACTGGCGAAAAGCCATTTAAAT
GCGAAATCTGTGATAAATCATTCGCTTTATATAGTACTTTAAGTCATCACCAAGCAGTTC
ACAATGGTGAGAGACCGTACAAATGCAACATTTGTGATAAATCGTTTGCTACAAATCGTA
ACTTAAAGGTTCACCATTTGGTTCACACTGGTGAGAAACCATTCAAATGTGACATTTGTG
ACAAATCGTTTACTGCAAATGCTGGTCTGACAGTTCACAAATTCACTCATACTGGTGAAA
AGCCCTACAAATGCAACTATTGTGAAAAATCGTTTACTTCAAATGGTCTCTTAAAAAATC
ACCATAGAACCCACACTGGTGAGAAGCCATTCAAGTGTGCCTATTGTGAAAAATCATTTG
CAGCAAATCGCTCCTTAAGAAGCCACGAAACAATTCACACTGGAGAGAAGGCATTTCAAT
GTAAATATTGTGACAAATTGTTTTCTCTAAGTGGTAACCTAATGATGCACCAAAGAATGC
ACACAGAAGAGAAACCATACAAATGTGAAATATGTGACAAGTCCTTTAAGCACAACTCCA
ACATGTATAAACATATGTCAATCCACTATAGAGAGAAACCCTTTGAGTGTAAACTGTGTA
GAAAGGGTTTTACAGAACGCTTTGATTTAATCAAACATTATACTGTGCATAGCAAGAAAC
CATTTAAGTGCAGCGAATGTTACAGAGCATATTACCGAGAGGCTGACTTTATAATACACC
AACGCTCTCATACTGAAAAGAAGCCATACAAATGTTCTTTATGTGACAAGTCTTTTCCTA
GCAACTCGAACTTGGATAGGCATATGTTACTCCATTATAGAGAAAAACCTTATGAGTGTA
AACTGTGTGGAAAGGGATTCATGCAAAATAAAGATTTAAAGGCACATTATACCCAACATA
AGAATATGAAACCATTCAAGTGTGATAAATGTGACAAAGCATATTTACAAGAGGCTGGCC
TGATAGTTCACCAACGCACTCATTCTGGAGATAAGCCATTCAAATGTAGCGCTTGTGACA
AATCGTTTACTTCAAATAGTCAATTAAAGAGCCATCAAATAACCCACAGTGGTGAGAAGC
CGTTTCAATGCAACATTTGCGACAAATCATTTGCTGCAAAACCTCATCACTGCCTTCATA
CACGGAAAAGGCCGTACAAATGCAACATTTGTAAAAAGTCTTTTTCTGGTAATAGTAGCT
TGAAAATTCACCAAAGAACCCACACTGGTGAGAAGCCATACATATGTAACATTTGTGAAA
AAGCGTTTACCACAAACGGTCACCTAAAGTCTCACCAAAGAATGCACACTGGTGAAAAGC
CATACCAATGCAAACTTTGTGAAAAATCATTTGCCGCAAATAGAACATTAAGGGATCACC
AAGCAGTACACACTGGAAAGAAGGCGTATCAATGCAACATTTGTGAAAGACTGTTTACTA
CAAACAGCCACTTAAGAGATCACCAAAGACTCCACAGTGGTCAGAGGCCATACAAATGCA
ACCTTTGTGAAAAAGCGTTTACAAGAAGCAGTAACTTGAAAATCCACCAAAAATTTCATA
CTGGGGAGAAGCCATACAAATGTGACCTTTGTGAAAGGGCGTTTTCTGCAAGCAGTAACT
TAAAGAGTCATGAAAGAACCCACACTGAAGAAAAATCATACAAGTGCTCAATCTGTGAAA
AAACATTTTTTACTGTTTCTCAAATAAAGTCTCATGGAAAAGTACATACTGAAGACAAAC
AATACAAATGTGATGAGTGTGGCAAATATAAGCCGTACAAATGTAACGTTTGTGATAAAT
CTTTTATTTCAAATACTGTTTTAAAAAATCACGAGTTAATCCACACTGGGGAAAAGCCTT
ATCAATGTAACATTTGTGGAAAATCATTCGCGAAAAATAGTTTCCTAAAAGGTCACCAAA
AAGTCCACACTGGTGAGAAGCCCCACCAATGCAATATTTGTGATAGATCATTTTCTACAA
ATGGTATCCTAACAAGACACCATAAGGTTCACACTGGTGAAAAGCCATATCAATGCGAAA
TATGTCAAAAATCGTTTAGTACAACTACTAAATTAAAATATCACCAACGAGTTCACACTG
GAGAGAAGCCATATCAATGCAAAACTTGTATGAAACGTTTCTCAGATAAAGGAAATATGA
AACAGCATGAACAGAGACGACATTTACCCAAAACTAGCAGCTAGAATATACCTTCAAACA
ATAATGCAAATATAAAGTTAAAAAAGAATGAGGTACATAGATACACCATGTATGATATAT
CTGAATGGAAAAGTGTTTCCAAATAAGTTTTAGTATGTTTTAACAGTGTTTTTTGTTTCT
TTCTGTGTTTTTAATTTGTTTACCACTGTTATAATTGTAAATAGATAGACAGAATAAAGT
AATTATATTTTTCTAGTGAGCACTAGCTGTATAAATGGACCAAATGTGTATTGTGCTCAT
AAAAACACACATGGTATAACTATACCTTTTCAATTATCCAGAGGTGCCTGAATTTACTGT
ATGTTTGTGTTGTTAGACGTTTTTGTAACTTGTTACTTTATCCTTGCTTGGCCATAAAAT
GGAGTTGTTGAACACAGGTGATCTGTTTCAAACACTTCGTGTCAGCTTACAAGTTTGTTA
CTGTTATAATATTTCTTTAGGGGAATTTTTTTATATGTGGCTGATAATTTGCATAACTCA
TTGGTGATCATTTGGTTGAAGCTATTGTCACAGGGTGTCTTGCCCAAGGACACATACGCC
CACAATGGTAGCAGCGTAGAGCCTTGAACCCATTACCTCTCGGTTAGCGGCATGTAAGCT
AACCAACTGTGCTACATTATCACAATTAAAACATAAAGACTTTTTATTTATCTATGTGCA
AATATTGAAACAGTGACAGTTTAATACTGAATACAACTATTGCAATTCAATCAAGAAACA
CTGAAAATTCATGCAAAATAAACTGATTTAGTAAAAAAATAAAATGTTATCGCTAAA

InterProScan

SMART
Znf_C2H2_type (IPR013087) - T[23-45] 0.38 - T[51-73] 0.0035 - T[79-101] 3.4 - T[107-129] 0.0037 - T[135-157] 0.01 - T[163-185] 0.0011 - T[191-213] 4.0E-4 - T[219-241] 0.0077 - T[247-269] 7.7E-4 - T[275-297] 0.02 - T[303-325] 9.7E-4 - T[331-353] 0.057 - T[359-381] 0.0054 - T[387-409] 4.3E-4 - T[415-437] 0.014 - T[442-464] 0.19 - T[470-492] 4.7E-5 - T[498-520] 0.0076 - T[526-548] 0.018 - T[554-576] 7.5E-4 - T[582-602] 59.0 - T[606-628] 2.9E-4 - T[634-656] 3.7E-4 - T[662-684] 0.0084 - T[690-712] 0.0027 - T[718-740] 0.0042 - T[746-768] 0.005 - T[774-796] 0.16 - T[813-835] 0.0024 - T[841-863] 0.0017 - T[869-891] 0.0056 - T[897-919] 3.7E-4 - T[925-948] 0.0057
ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[23-50] 12.882 - T[51-78] 13.297 - T[79-106] 14.96 - T[107-134] 13.568 - T[135-162] 11.198 - T[163-190] 16.81 - T[191-218] 15.791 - T[219-246] 15.251 - T[247-274] 15.916 - T[275-302] 15.376 - T[303-330] 16.706 - T[331-358] 14.42 - T[359-386] 15.417 - T[387-414] 14.731 - T[415-442] 11.302 - T[442-469] 13.568 - T[470-497] 14.731 - T[498-525] 13.526 - T[526-553] 15.23 - T[554-581] 16.373 - T[606-633] 17.163 - T[634-661] 16.851 - T[662-689] 14.046 - T[690-717] 16.103 - T[718-745] 17.308 - T[746-773] 15.272 - T[774-801] 12.819 - T[813-840] 15.625 - T[841-868] 17.558 - T[869-896] 15.687 - T[897-924] 17.163 - T[925-953] 10.699
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[24-45] . - T[53-73] . - T[81-101] . - T[109-129] . - T[137-157] . - T[165-185] . - T[193-213] . - T[221-241] . - T[249-269] . - T[277-297] . - T[305-325] . - T[333-353] . - T[361-381] . - T[389-409] . - T[417-437] . - T[444-464] . - T[472-492] . - T[500-520] . - T[528-548] . - T[556-576] . - T[608-628] . - T[636-656] . - T[664-684] . - T[692-712] . - T[720-740] . - T[748-768] . - T[776-796] . - T[815-835] . - T[843-863] . - T[871-891] . - T[899-919] . - T[927-948] .
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[24-73] 7.37E-15 - T[76-110] 1.24E-7 - T[101-153] 6.14E-16 - T[172-228] 9.65E-23 - T[227-284] 4.38E-21 - T[283-340] 2.91E-20 - T[339-396] 3.08E-20 - T[381-433] 5.06E-16 - T[451-507] 2.54E-19 - T[497-529] 2.35E-7 - T[535-591] 1.27E-21 - T[604-656] 3.14E-19 - T[642-699] 4.35E-19 - T[699-755] 3.35E-22 - T[754-809] 3.49E-18 - T[811-863] 1.02E-18 - T[849-906] 3.8E-20 - T[891-943] 1.9E-18

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ZN729_HUMAN 44.313 % 783 0
ZN850_HUMAN 45 % 782 0
ZN208_HUMAN 45.385 % 807 0





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