Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 546

>KH.L154.14.v1.A.SL2-1
LEKMSAPVLVLNQNSKRESGRKVQLGNVAAAKTIADVIRTCLGPRSMLKMLMDPMGGIVM
TNDGNAILREITVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMMTAAEQFLEQKMHP
TVIIAAYRKALDDMQEILAELSVSIDPTEKSEMRKIVKSAIGTKFINKWADLACDMAIKS
VSTVVLDNQSTGRREIDIKRYAKVEKVPGGILEDSEVLDGVMVNKDVTHPAMRRKIENPR
ILLLDCSLEYQKGESQTDMELSNETDFEKILQMEEEYIKRVTSEIISHKPDLVFTEKGIS
DLAQYFLSKANITAIRRLRKSDNNRIARACGGTVCSRPEEIREEDIGTGAGLFEVRKFGE
EYFTFITKCKDPKACTILLRGASKDILMEVERNLQDAMQVTRNVMINPQLLPGGGAVEMA
VAQIMKEKSKSMTGVEQWPYRAVADALEIIPRTLIQNCGASTIRTITALRAKHAADGNQT
WGVNGETGQIADMKDLDVWEPVAVKLQTYKTAMETAMLLLRIDDIVSGTKKAEGGEGTGS
AAPTGQ

Nucleotide sequence

Length: 1,967

>KH2012:KH.L154.14.v1.A.SL2-1
CTTAAGCATTTAATCCTTCTTTAGTATTTTTGTTAAAAACTAGTTGGAAAAAATGTCGGC
ACCAGTGTTAGTACTCAACCAAAACTCCAAGAGAGAGTCTGGGCGCAAAGTTCAGCTTGG
TAATGTTGCGGCCGCTAAAACTATTGCGGATGTGATTCGGACATGTTTGGGCCCAAGATC
TATGCTTAAGATGCTCATGGACCCTATGGGAGGCATTGTGATGACAAATGACGGGAACGC
TATCCTCCGGGAGATCACAGTCCAACATCCAGCAGCAAAATCGATGATCGAGATTAGCAG
GACACAAGATGAAGAAGTGGGAGACGGGACGACTTCAGTGATCATCCTGGCAGGAGAGAT
GATGACGGCAGCAGAGCAGTTCTTGGAGCAGAAGATGCATCCGACGGTGATCATTGCTGC
TTATCGGAAAGCTTTAGACGACATGCAGGAGATTTTGGCAGAGCTTAGCGTGAGTATTGA
CCCCACTGAGAAGTCAGAAATGAGGAAGATCGTAAAAAGTGCGATTGGTACAAAGTTTAT
CAACAAATGGGCGGACCTGGCATGCGATATGGCGATCAAGTCTGTTTCGACTGTTGTGCT
CGATAATCAAAGCACTGGCCGGAGGGAAATTGATATAAAAAGGTACGCAAAGGTGGAGAA
AGTGCCAGGGGGGATTTTGGAGGATTCTGAGGTTTTGGATGGTGTGATGGTCAATAAAGA
TGTGACACATCCAGCCATGAGGAGGAAAATTGAAAATCCAAGGATTTTGCTCCTAGATTG
CTCTTTGGAGTACCAAAAGGGTGAGAGCCAGACAGATATGGAGCTAAGTAATGAAACCGA
TTTCGAGAAAATTCTTCAAATGGAAGAGGAGTACATTAAGCGGGTCACAAGTGAGATTAT
TTCTCATAAACCAGATTTGGTGTTCACTGAAAAAGGGATTTCGGATCTGGCGCAATATTT
CTTGTCAAAAGCGAATATCACTGCTATTCGGAGATTGAGGAAGTCGGATAATAATAGAAT
TGCTCGGGCTTGCGGAGGCACGGTGTGCTCCAGGCCTGAGGAGATCAGAGAGGAGGATAT
TGGAACCGGAGCTGGGCTCTTCGAAGTCCGGAAGTTTGGAGAAGAGTATTTTACCTTCAT
CACGAAGTGTAAAGATCCGAAGGCGTGCACTATTTTACTCCGTGGAGCAAGTAAGGACAT
CTTGATGGAGGTGGAGAGGAATCTTCAGGATGCTATGCAGGTGACGAGGAACGTGATGAT
CAACCCGCAACTTCTTCCAGGTGGTGGCGCTGTGGAGATGGCTGTTGCTCAAATAATGAA
GGAGAAGTCGAAATCCATGACGGGGGTGGAGCAGTGGCCGTATCGAGCTGTTGCTGATGC
GTTGGAGATCATTCCACGTACGTTGATACAGAACTGTGGGGCGAGCACTATCAGAACCAT
TACTGCGTTAAGAGCAAAGCATGCAGCTGATGGGAACCAAACCTGGGGTGTTAACGGAGA
AACCGGGCAAATTGCTGATATGAAGGATTTAGATGTTTGGGAGCCTGTCGCAGTGAAACT
TCAAACTTATAAAACAGCCATGGAGACAGCTATGCTGCTGCTGCGTATCGATGATATCGT
GTCTGGAACTAAGAAAGCTGAAGGTGGAGAAGGGACTGGCAGTGCTGCACCAACTGGACA
GTAATATTCAATTTTGAAATTCCATAAAAAAAATTCCATTTTGCATGAAATTCGTGCATG
CTGTAATGCAGTGTTGTGTGGCATAGTGGGATTCTACTACGCTCATTTTGCTGTTGTTCG
CTTAAAATTCATAAACTTGTAGTTCAAATTGTTTGCCGTACGTTTTTCCCTCTATGTAAG
CTGCTAGAAATTTCCTAAACCATTTAAAAGTCGTAAAAACCTAAACCGTTTATATCTTTT
TTGAAATTCGTGAAAAACTGAAACTATTTGTATCCCCTTTGTTGTAG

InterProScan

TIGRFAM	Chap_CCT_gamma (IPR012719) - T[7-531] 1.1E-276
CDD	Chap_CCT_gamma (IPR012719) - T[7-528] 0.0
PANTHER	Cpn60/TCP-1 (IPR002423) - T[9-536] 7.2E-287
SUPERFAMILY	GROEL-like_equatorial_sf (IPR027413) - T[15-145] 1.57E-85 - T[408-528] 1.57E-85
Gene3D	GROEL-like_equatorial_sf (IPR027413) - T[27-144] 1.7E-180 - T[408-525] 1.7E-180
Pfam	Cpn60/TCP-1 (IPR002423) - T[34-527] 4.9E-165
PRINTS	Chaperone_TCP-1 (IPR017998) - T[36-52] 4.5E-27 - T[58-76] 4.5E-27 - T[88-107] 4.5E-27 - T[376-398] 4.5E-27 - T[410-422] 4.5E-27
ProSitePatterns	Chaperonin_TCP-1_CS (IPR002194) - T[39-51] . - T[60-76] . - T[88-96] .
Gene3D	TCP-1-like_intermed_sf (IPR027410) - T[145-218] 1.7E-180 - T[372-407] 1.7E-180
SUPERFAMILY	TCP-1-like_intermed_sf (IPR027410) - T[145-218] 3.36E-24 - T[372-407] 3.36E-24
SUPERFAMILY	GroEL-like_apical_dom_sf (IPR027409) - T[214-381] 1.39E-52
Gene3D	GroEL-like_apical_dom_sf (IPR027409) - T[219-371] 1.7E-180