Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L16.3.v1.A.SL3-1

Possible name(s)

GPATCH2; GPATCH2L; RBM5

Gene model

KH2012:KH.L16.3

Location

KhL16 [25,085 / 30,962]

Sequences

Amino acid sequence

Length: 323

>KH.L16.3.v1.A.SL3-1
TADSDNVKMEELVQDLTSALEESELKIEVDQESPQHDLFKKRRMRKKRPVINEDGIVFKY
LETCSDESSTNTRTVISVVCDKRLSGSDTESGFLLPRVRRHRRRKTKRMETDTGFKNYIK
NKTECCNSTRELNGDRKNELESGISASDDSNEDVSAQDGDDEMTDFFNEPGGSVCGIPSI
VPWWEEDAMEDTKLKCIINGAMSSMSDAAQKGFHSRINRLPGMAARSIRRGRRRYKQKKT
GERVINNGEAPRQEIKNYKRRKTDEIPIELDTIPNLPLPHTNKGHKMLVGMGWNPGEGLG
LNGQGIQNPVHATRRPKRNGLGL

Nucleotide sequence

Length: 1,514

>KH2012:KH.L16.3.v1.A.SL3-1
CAACAGCTGATTCTGATAATGTTAAAATGGAGGAATTGGTTCAAGATTTGACTTCAGCTC
TAGAGGAATCAGAGTTAAAAATAGAAGTGGATCAAGAGAGCCCTCAGCATGATCTATTTA
AAAAACGGCGTATGCGCAAGAAACGGCCAGTGATAAATGAAGATGGGATTGTTTTCAAGT
ATTTAGAAACTTGTAGTGATGAATCAAGCACAAATACAAGGACTGTAATCTCTGTAGTCT
GTGACAAAAGATTGAGTGGTTCAGATACTGAAAGTGGTTTCCTACTGCCGAGAGTACGGA
GACACAGAAGACGGAAAACTAAAAGAATGGAAACGGACACTGGTTTTAAAAATTATATAA
AAAACAAAACTGAATGTTGTAACAGCACAAGGGAATTAAATGGAGACCGTAAAAATGAAC
TGGAAAGTGGAATTAGTGCAAGTGATGATTCAAATGAAGACGTATCAGCTCAAGATGGGG
ACGATGAGATGACAGACTTTTTTAATGAGCCAGGAGGATCAGTTTGTGGCATCCCAAGTA
TTGTTCCATGGTGGGAAGAAGATGCAATGGAAGACACTAAACTTAAATGCATCATTAATG
GAGCAATGTCAAGCATGTCGGATGCAGCTCAGAAAGGTTTTCATTCCCGAATAAATCGAC
TTCCAGGGATGGCTGCTCGGTCAATAAGAAGAGGACGAAGAAGATACAAACAGAAGAAAA
CTGGAGAAAGGGTAATCAATAATGGTGAAGCTCCAAGACAAGAAATTAAGAATTACAAAA
GAAGAAAAACTGATGAAATACCAATTGAGCTTGATACCATACCAAACCTTCCACTGCCAC
ATACAAATAAAGGACACAAAATGTTGGTTGGTATGGGTTGGAATCCTGGAGAAGGCTTAG
GTTTAAATGGACAAGGAATCCAAAATCCAGTTCATGCAACTAGACGACCAAAAAGAAATG
GACTTGGCCTATAAATAGTTTGATTTCTTTCTTATAGTGATAATGTGGCTAAGTGTGTGA
CACACCAATAGATCTGAAAGAGGACAGTGTTGGAGGTTGTTAAAATACCTTCTGGAAAAA
CAGGCAATAAGAGCATTCTGCTTTTATACGCTACGTCCTACATTATAACACACCTTTTAA
ACTAGTTATCCTATCATGATTACTTGTATTGTAATGTTGTTGTTTAAACAACATAAAGCA
AACAAATAACTTGGTTACCTGTACTAGATTAAGCCTAAACCATTTTTATAAGGTTTTAAG
ATTTGGTGTATTAATGAAAGGTGTTTTGGTACATAATGTTGTTCCTTGTTCTGCATATTT
GTTAAGTCCATTTAGTTTTATTTATTTTATTCTAAAATGTATTTTAAATATGATCTTGTC
CCTAAAATTGATTTTACACTTTTACAATAATATGTGTTATATCTTAAACAATGCATTATC
ATAACAATTTCAAAATATTTTTTTGACATCCCTAATAATTTATTTTTGGGCTCTAAATAC
ATTGTTTTACCCAG

InterProScan

PANTHER	Gpatch2 (IPR026291) - T[9-99] 9.5E-61 - T[96-116] 9.5E-61 - T[134-266] 9.5E-61 - T[276-322] 9.5E-61
SMART	G_patch_dom (IPR000467) - T[278-322] 2.2E-11
ProSiteProfiles	G_patch_dom (IPR000467) - T[280-323] 16.289
Pfam	G_patch_dom (IPR000467) - T[281-322] 4.6E-16

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value