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TRANSCRIPT CARD

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  1. Molecular Tool 'Ci-Bra mRNA' > 
  2. Transcript 'Phmamm.CG.MTP2014.S2...' > 
  3. Transcript 'KH2012:KH.L170.78.v1...'

Transcript Model

Transcript Id

KH2012:KH.L170.78.v1.A.nonSL3-1

Possible name(s)

EIF3A; HYDIN

Gene model

KH2012:KH.L170.78

Location

KhL170 [58,359 / 70,325]

Sequences

Amino acid sequence

Length: 1,092

>KH.L170.78.v1.A.nonSL3-1
ATKKLSNMPEYFQRPENALRKAHEFLDVGKLKPALDVLSDVLRSKKHRTWQKVHEPIIRQ
YLDLCVDLRRSQAAKEGLYQYKIICQQVNTKSLEDAVTHYLDLAEEKTKEAREKSAETAL
KLVEDLDMIESPEGMLLRAVTGEDTQDRTDRLMLTPWVKYLWESYRQCLDLLRNNCRVER
LYHTIAQQAFKFCLNYDRRTEFRKLCDNLRNHVKLSEQRHGTQFSVNLTNPETQALHLET
RIAQLDAAIQIELWQEAFKAVEDIHYLMSLSKRPPKPQTLANFNNKLSLVFWKAENMLFH
ACTRHRLFHLTKDMKRNPSIDDLTRMASLMLVATLAIPITEQKHGIGKLLDMEGALIEKH
LNLSKLLGLDRPPTRSSLIDDFLKFNLLQYVPRQIRELYQWLEVDFHPRKLYERVSCTLS
WIKEQTREPELVQYIPYLQKIVVSKVLQQVSQVYQTIEFSHLRKLVPFCSIFQLERIIVD
AARNGQLQVRLDHNRGALSFGTDLNASPLYVEDEFFETNRLQALPSERVSDRFNTMARAL
LVANQMLNGEAHKNEIDQQQQTVLSYHLKTQGKEHKKILERKFVIEERKERLEHINHEKE
LKEQRAIQEQEEAVKAAEQERLSKEQKEREAQRRKDADEEEKRKNASDRLEMIRKSEIGQ
KMLKDIDLETFNQIDPDELMERQMATMEKEKKEKQDRLKAQEKKVDYFERAKRLEEIPLL
KERFKHKIKEDAELWDKLEEEKIINLKKEQELALGHQKRMIRMNDDKEAFLDHLRQTRSA
IYQEKLAVYEKLLAEERAVRLAKRRAARKEERRQKWLKEREEEEQRRKDEEIKKKREEEE
RMKLEKQEEEKRAYNAKMAALEHQEQLQREREREIEERILRERNIASTKSERPPERTAWR
RDTPKTDADRGAWRRGGDAPRERGEWGRGDTRNERSEEPWRRGPPTRDVGRNRSPPSQGA
WRPRTVQREADRPSPRGAPTREENSWRRRSPSPRRTSPQGRRSSPPGRRVSPPGNASPER
RRSPPGRRGSPGRAWRRDASDQDSKKEGDSQAWKPKERTTTPSTGAWRPRIRSDQPPPKK
DDRRDDWRSSRR

Nucleotide sequence

Length: 3,534

>KH2012:KH.L170.78.v1.A.nonSL3-1
GATTTCGGAAATGTTTTAACTCTATATATCTGTTTAGTTCAGAGCTAAGCGACTAAAAAG
TTGTCAAATATGCCTGAGTATTTTCAGAGGCCTGAAAATGCCCTTCGGAAGGCGCACGAA
TTTCTTGATGTTGGCAAACTAAAGCCTGCCTTGGACGTTTTGAGCGATGTGTTGCGCAGT
AAAAAACATCGCACGTGGCAAAAAGTGCATGAGCCGATCATACGACAGTATTTGGACCTC
TGCGTTGATCTGCGACGTAGTCAAGCCGCTAAGGAGGGACTTTACCAGTATAAGATCATC
TGCCAGCAGGTGAACACCAAGTCATTGGAAGATGCCGTCACCCATTACCTTGATCTGGCT
GAAGAGAAAACCAAGGAAGCTCGGGAGAAATCGGCAGAAACTGCGCTTAAACTTGTGGAG
GATTTGGATATGATTGAATCGCCAGAGGGAATGCTGCTGCGCGCAGTGACTGGTGAGGAC
ACGCAGGATCGAACCGATCGTTTGATGCTTACCCCGTGGGTAAAGTATTTATGGGAGAGT
TATCGGCAGTGTTTGGATTTGTTGCGCAACAACTGCCGTGTGGAACGCCTGTACCACACC
ATTGCTCAGCAGGCTTTCAAGTTCTGTTTGAACTACGATCGTCGTACGGAGTTCCGTAAG
TTGTGTGACAATCTTCGTAATCACGTGAAGCTTAGTGAACAACGTCACGGAACTCAATTC
TCGGTAAATCTCACGAACCCAGAGACGCAAGCTCTTCACCTGGAAACGAGGATCGCTCAG
TTGGACGCAGCGATACAGATCGAACTCTGGCAGGAAGCTTTCAAGGCTGTTGAAGACATC
CACTACTTAATGAGTTTGTCCAAGCGTCCACCAAAACCACAAACTCTCGCTAACTTCAAC
AACAAACTTTCTCTTGTCTTCTGGAAAGCCGAGAACATGCTCTTTCACGCCTGCACACGA
CATCGGTTGTTCCACCTCACCAAGGACATGAAACGAAATCCTTCAATTGATGATCTGACA
AGAATGGCTTCTCTTATGTTGGTTGCCACATTAGCGATCCCGATCACCGAACAAAAACAC
GGCATTGGGAAACTTTTAGACATGGAAGGAGCACTTATTGAAAAACATCTCAATTTGTCG
AAACTTCTTGGCTTGGATCGCCCACCAACAAGAAGTTCGCTCATCGATGACTTTCTGAAA
TTCAACCTGTTACAATACGTACCACGGCAAATCCGTGAGCTGTACCAGTGGTTGGAGGTT
GATTTCCATCCTCGTAAACTTTATGAGAGGGTGTCTTGTACATTGTCATGGATTAAAGAA
CAAACTAGGGAACCAGAGTTGGTCCAATACATCCCATACTTGCAGAAGATTGTGGTTTCT
AAAGTTCTCCAGCAGGTCTCACAAGTTTATCAGACGATTGAATTCTCTCATCTTCGGAAA
CTCGTTCCATTCTGCTCCATCTTTCAACTGGAGAGGATCATCGTGGATGCAGCAAGGAAC
GGCCAACTCCAGGTGCGACTCGACCACAACCGAGGGGCTTTAAGTTTTGGAACCGACCTA
AACGCATCCCCACTTTACGTGGAGGATGAATTCTTCGAAACTAACCGTCTTCAAGCCCTC
CCAAGTGAGCGAGTATCTGACAGATTTAACACCATGGCGCGCGCACTGCTGGTGGCGAAC
CAGATGCTTAATGGGGAAGCACATAAGAATGAGATCGACCAACAGCAACAAACTGTGTTG
TCGTATCACCTGAAAACTCAGGGCAAGGAACACAAGAAAATACTTGAGCGTAAATTTGTC
ATTGAGGAAAGAAAAGAAAGGTTGGAGCATATTAATCATGAGAAGGAGCTGAAGGAGCAA
AGAGCAATCCAGGAGCAGGAGGAGGCGGTGAAGGCTGCGGAGCAAGAGAGGTTGAGCAAG
GAGCAAAAAGAGAGAGAAGCGCAACGGAGGAAAGATGCAGATGAAGAGGAAAAACGGAAG
AACGCGAGCGATCGTCTGGAAATGATTAGGAAGAGCGAGATTGGACAGAAGATGTTGAAG
GACATTGATTTGGAGACTTTCAACCAGATCGATCCTGATGAGTTGATGGAGAGACAGATG
GCGACCATGGAAAAAGAGAAGAAGGAGAAACAAGATCGCTTGAAAGCTCAAGAGAAAAAG
GTTGATTATTTCGAGCGTGCTAAGCGTTTGGAGGAGATCCCTTTGTTGAAGGAAAGGTTC
AAGCATAAGATTAAAGAGGATGCCGAGTTGTGGGATAAACTGGAAGAAGAAAAGATTATC
AACCTGAAGAAAGAGCAAGAACTTGCCCTCGGACATCAGAAGCGAATGATCCGCATGAAT
GACGACAAGGAAGCGTTTCTCGATCATCTGCGACAAACAAGAAGTGCAATATATCAGGAG
AAACTTGCTGTTTATGAGAAGTTGCTTGCTGAAGAACGAGCTGTCAGGTTGGCAAAGAGA
AGAGCGGCGAGGAAAGAGGAGAGGAGGCAGAAGTGGTTGAAGGAGAGGGAGGAGGAAGAG
CAGAGGAGGAAAGATGAAGAGATCAAGAAAAAGAGAGAAGAAGAAGAAAGGATGAAGTTA
GAGAAGCAAGAAGAAGAGAAGAGAGCGTACAATGCAAAGATGGCTGCGTTGGAACACCAA
GAGCAACTACAACGTGAACGAGAGAGAGAAATTGAAGAAAGGATTCTTAGGGAACGAAAC
ATTGCTTCTACCAAGTCTGAAAGACCTCCGGAGCGAACTGCTTGGAGACGGGACACTCCG
AAAACCGATGCGGATAGAGGAGCATGGAGAAGAGGAGGCGATGCTCCTCGTGAAAGAGGA
GAGTGGGGAAGAGGAGATACGAGAAATGAACGGTCGGAAGAGCCTTGGAGGAGAGGTCCT
CCTACCCGCGATGTTGGAAGAAACCGCTCCCCACCATCCCAAGGAGCTTGGCGTCCTCGT
ACTGTCCAAAGAGAAGCAGATCGACCATCACCCAGAGGTGCTCCTACCAGGGAAGAGAAT
TCCTGGAGGCGCAGATCCCCTTCTCCTCGTCGAACATCTCCTCAAGGAAGAAGAAGCTCT
CCTCCTGGCCGTCGTGTGTCCCCTCCCGGTAATGCATCGCCAGAGAGACGGAGATCTCCT
CCTGGGCGACGTGGATCGCCAGGGAGAGCATGGAGACGGGATGCTTCGGATCAAGACTCT
AAAAAGGAGGGAGATAGCCAAGCTTGGAAACCAAAGGAAAGAACGACAACCCCTTCTACT
GGAGCATGGCGCCCAAGGATTCGGTCAGATCAACCACCACCAAAGAAAGATGATCGCCGT
GATGATTGGCGTTCAAGTCGTCGTTAAAATCATGGAAAATCTTGATTTGTATTGTCATGT
GTATTGTAGATATATAATTTTCTGTTTTGGGAGCTTATTTTTGCTTAAACAAATGACAAA
TTTTATTAAATTGGTTTTTGGGTTTGACTTTGAAAAAAGGTGACAGAATATTGAATCCTT
TTGTGTTTTCGCTGCTTTTTTGGCTGGTATGAAAATAAAGTTCTTGCATTGGAG

InterProScan

Hamap
EIF3A (IPR027512) - T[8-1008] 26.616
Pfam
PCI_dom (IPR000717) - T[375-501] 1.5E-16
SMART
PCI_dom (IPR000717) - T[433-517] 7.3E-10

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
EIF3A_HUMAN 49.407 % 887 0