- Transcript 'KH2012:KH.C11.205.v1...' >
- Clone 'cien116421' >
- Transcript 'Boleac.CG.SB_v3.S118...' >
- Transcript 'KH2012:KH.L18.39.v2....'
Transcript Model
Transcript Id
KH2012:KH.L18.39.v2.A.ND3-1
Possible name(s)
HECTD1; MIB1; MIB2
Gene model
Location
KhL18 [810,318 / 822,479]
Amino acid sequence
Length: 781
>KH.L18.39.v2.A.ND3-1
ISKMLGYRVVRGTDWAWDNQDNGEGNVGTVVEIGRSGSKTPDKTLVVQWDCGTRTNYRIG
YQGAFDLLVFDSAPAGIKHPSKQCDGCAERTMIRGTRWQCAQCKDYDLCTYCYMGGRHEK
SHRFRRYETETSRGQEVSPRDAARAVIQSKGLFKGARVMRGYHWEWGEQDGGPTKLGKIV
EIRGYQSESYRSVAQVTWDSGGTKNIYRVGHKGKVDLKYVGPGYGPSYYREHLPVCGRAT
VMDHASSSGEHSHFKVGEKVIVTLEVEVLKPMLEGHGGWNSKMANIRGKVGVVHRLTTAG
DVRVQYDPKDFDLAKAKPSPEDFRWTFHPAALERVIDTAEQASKFQSSQSKAGTSSSQSQ
HESLPLDLGDYSLSSVEQNESMPSVDSVRNSMEIGTEGKTPLLEALDGPTGLDHKLINRP
SNGVYPVHVVAQYFEKDRLIALQNKGANMEVVDLKGRTPLHCAVVGNKPQNVRWLMSAMK
ERNLPDKNGYTPLHRAVILDHTECCKEILSVKAERTLYANTKDEIKENTALHLCVSGHCN
LDIVHLVVEAGADVDELNGAGVTCVALLVEKSTENLLSRIRLPHSGKLWNSLQSTMQKHN
LVDKDGFVPRILATLCYLVLNGARVENAASKLPFSNWQQCVSTCASNRSHHTTLRCSQES
FPGDNEPSTSRYPCRSCNQTACVKFDPCGHVVVCKKCSYIVKKCLQCGVPITNKTCDGKP
LANVESTEDSNSCTICMDRKINTVLSPCNHMLSCQECSKMLKQCPVCREPIDKRVKVFPT
F
Nucleotide sequence
Length: 2,688
>KH2012:KH.L18.39.v2.A.ND3-1
ACCCGTTCCGCTTGTTTTCAAATTTTCAAATTTTATTGTTTACATAAGCCCAAGTCTGCA
AAAACCAAAAGCAAACAAAGTGGATGTAACTTGAGACACAATCTTGCTACAGTTTTCTTT
CGTTTCTTGTAAAGCTTTGCAGTAAATCTCCAAGATGCTTGGATACAGGGTTGTCCGAGG
CACTGATTGGGCATGGGATAACCAGGATAATGGTGAGGGGAACGTTGGCACGGTGGTCGA
AATCGGTCGAAGTGGCAGCAAAACGCCTGATAAAACATTGGTCGTCCAGTGGGACTGTGG
AACCAGAACTAATTATCGTATAGGCTACCAAGGAGCCTTTGACCTTTTAGTTTTTGACAG
CGCACCAGCTGGTATTAAACACCCGAGTAAGCAATGCGATGGATGCGCAGAACGTACAAT
GATACGAGGTACACGGTGGCAGTGCGCTCAATGCAAGGACTACGACTTGTGCACGTATTG
CTACATGGGCGGAAGACACGAGAAAAGTCATCGGTTCAGAAGATACGAAACGGAAACGTC
AAGAGGACAAGAAGTGTCGCCTCGCGATGCTGCGCGCGCTGTCATTCAAAGCAAAGGCTT
GTTCAAAGGTGCGCGGGTTATGCGAGGTTACCATTGGGAGTGGGGCGAGCAAGACGGTGG
GCCCACAAAACTCGGAAAGATTGTCGAAATCCGAGGCTACCAGAGCGAGAGTTACCGTAG
CGTCGCGCAGGTCACGTGGGACAGCGGCGGCACCAAGAATATATATAGAGTGGGCCACAA
AGGCAAAGTCGACCTTAAGTATGTTGGACCAGGATACGGGCCAAGTTATTACCGTGAGCA
TCTCCCAGTATGCGGCAGAGCCACCGTAATGGACCATGCCTCGTCATCCGGGGAACATTC
TCATTTCAAAGTTGGTGAGAAAGTAATTGTGACGTTGGAAGTCGAGGTGCTTAAACCAAT
GTTGGAAGGTCATGGGGGTTGGAACAGCAAAATGGCGAACATACGTGGTAAGGTGGGCGT
GGTTCATCGATTAACTACGGCTGGAGATGTCAGGGTACAGTACGACCCAAAAGACTTTGA
TCTCGCCAAAGCCAAGCCCTCACCTGAAGATTTTAGATGGACCTTTCACCCCGCTGCTCT
TGAAAGAGTGATTGATACGGCAGAACAAGCGAGCAAGTTTCAAAGTTCACAATCAAAGGC
CGGTACATCTTCAAGTCAATCTCAACACGAGTCACTGCCACTTGACTTAGGTGACTACTC
ACTATCGTCAGTGGAGCAGAACGAATCGATGCCTTCCGTGGACTCGGTCAGAAACTCAAT
GGAAATCGGAACAGAAGGCAAAACTCCTTTATTGGAAGCACTGGATGGCCCTACCGGTCT
TGATCATAAACTGATTAACCGTCCGTCCAACGGCGTCTACCCTGTTCACGTGGTGGCGCA
ATATTTCGAGAAAGATCGATTGATCGCATTGCAGAATAAGGGAGCAAACATGGAGGTCGT
GGACTTAAAGGGACGAACTCCACTACACTGTGCTGTGGTCGGGAACAAGCCGCAGAACGT
AAGATGGCTGATGTCAGCTATGAAGGAAAGGAACTTACCCGACAAAAATGGCTACACACC
TTTGCACAGAGCAGTTATACTAGACCATACAGAATGTTGTAAAGAAATCTTAAGCGTCAA
AGCGGAACGAACATTATACGCTAATACTAAGGACGAGATAAAAGAAAACACGGCACTACA
CTTATGCGTGTCTGGTCATTGCAACCTGGATATCGTGCATTTAGTTGTTGAAGCTGGTGC
AGATGTGGACGAGCTGAACGGTGCGGGTGTCACCTGTGTTGCTTTGCTCGTTGAAAAATC
AACGGAAAACTTGCTCTCGAGAATTCGACTTCCCCACTCCGGGAAATTATGGAACTCGCT
CCAATCAACAATGCAAAAACACAATTTAGTTGATAAAGATGGATTTGTGCCACGCATTCT
TGCCACTCTGTGTTATCTTGTTTTAAACGGTGCTCGCGTCGAAAATGCTGCATCTAAACT
TCCTTTTTCTAACTGGCAACAGTGCGTTTCAACATGTGCCTCCAACAGAAGCCATCACAC
CACCTTACGCTGCTCACAAGAAAGTTTCCCCGGTGATAATGAACCATCAACGTCACGTTA
CCCGTGTAGATCGTGTAACCAAACTGCTTGTGTGAAGTTCGATCCTTGTGGTCATGTAGT
CGTCTGTAAAAAATGCAGTTATATTGTTAAAAAGTGCCTCCAATGTGGCGTTCCTATCAC
TAACAAAACATGCGATGGAAAACCGTTGGCGAATGTCGAATCTACGGAGGATTCGAATTC
GTGCACGATATGCATGGACCGAAAAATCAACACCGTCCTTTCCCCTTGTAATCACATGTT
GTCTTGTCAAGAGTGTTCGAAAATGTTAAAACAGTGCCCGGTTTGTAGGGAGCCCATCGA
TAAAAGGGTGAAGGTTTTTCCCACGTTTTAGTTGCCGTAATCGCCGTCCGGTTTTCAATG
TTATTGGTGTAGTTTTTATATATGTGCAATATCGTCACTGTATCGTTTTATTATGAACGT
TCCATTGACTAAACATTAGTCGTTGTGGAAATACCGAACAGCCCAAAATCATGAAGAGTG
TTTACTACTGTCGAAATAAAACAATAAACAAAATTATTATTAACACAA
| ProSiteProfiles |
Mib_Herc2 (IPR010606) - T[1-73] 31.031 - T[144-223] 25.654 |
| Gene3D |
Mib_Herc2_sf (IPR037252) - T[2-72] 9.1E-22 - T[140-226] 3.4E-22 |
| SUPERFAMILY |
Mib_Herc2_sf (IPR037252) - T[4-72] 5.75E-21 - T[146-221] 9.68E-19 |
| Pfam |
Mib_Herc2 (IPR010606) - T[6-70] 2.6E-23 - T[155-220] 4.6E-21 |
| SMART |
Znf_ZZ (IPR000433) - T[78-124] 4.4E-10 |
| ProSiteProfiles |
Znf_ZZ (IPR000433) - T[78-126] 13.018 |
| Pfam |
Znf_ZZ (IPR000433) - T[82-123] 1.4E-9 |
| Gene3D |
Ankyrin_rpt-contain_sf (IPR036770) - T[396-626] 5.2E-28 |
| SUPERFAMILY |
Ankyrin_rpt-contain_sf (IPR036770) - T[419-570] 8.9E-27 |
| SMART |
Ankyrin_rpt (IPR002110) - T[422-451] 340.0 - T[455-484] 0.25 - T[488-517] 0.068 - T[526-556] 0.025 - T[684-713] 4200.0 |
| ProSiteProfiles |
Ankyrin_rpt-contain_dom (IPR020683) - T[422-559] 26.629 |
| Pfam |
Ankyrin_rpt-contain_dom (IPR020683) - T[439-510] 5.1E-10 |
| CDD |
Ankyrin_rpt-contain_dom (IPR020683) - T[452-580] 6.79473E-25 |
| ProSiteProfiles |
Ankyrin_rpt (IPR002110) - T[455-487] 8.95 |
| SMART |
Znf_RING (IPR001841) - T[674-707] 1.6 - T[733-767] 1.4E-4 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[719-779] 8.3E-18 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[733-768] 11.324 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MIB2_HUMAN | 40.484 % | 358 | 4.12E-110 |
| MIB1_HUMAN | 39.106 % | 251 | 6.51E-71 |