Aniseed - Transcript Card

Transcript 'KH2012:KH.L40.23.v1....'

Transcript Model

Transcript Id

KH2012:KH.L40.23.v1.A.nonSL10-1

Possible name(s)

RPS6

Gene model

KH2012:KH.L40.23

Location

KhL40 [74,888 / 76,945]

Sequences

Amino acid sequence

Length: 252

>KH.L40.23.v1.A.nonSL10-1
NMKLNISFPATGCQKVFEVDDEQKLRVFYDRRMSQEVSADGLGDEWKGYIVRITGGNDKQ
GFPMKQGVLTAGRVRLLLGKGHSCYRPRRTGERKRKSVRGCIVDAGLSVLSLVIVKRGEK
EIPGLTDNTIPKRLGPKRASKIRKLFMLGPDDDVRKYVVRRPLPAKEGKPPKTKAPKIQR
LVTPQSVQRKRHRIAIKRRRTERGLQEEAEYKKLLAKRLKVSAEQKEKKAEAHKKRRLSS
LRASQSQSVSSQ

Nucleotide sequence

Length: 942

>KH2012:KH.L40.23.v1.A.nonSL10-1
GTTATGGCGTGGAGATTTCAGTTCTTTTTACGCAGTGATGTCTAGCGTTCAGTAGTTTGG
GGTGAAATATGAAGTTGAACATATCTTTCCCCGCAACGGGGTGTCAGAAAGTATTCGAAG
TCGACGATGAACAAAAACTTCGCGTCTTCTACGACCGACGTATGTCACAAGAAGTGTCCG
CTGATGGCTTGGGAGACGAGTGGAAGGGCTACATAGTTCGAATCACTGGAGGTAATGATA
AACAAGGCTTCCCGATGAAACAGGGTGTGCTTACTGCTGGTAGAGTTCGATTGCTACTTG
GAAAGGGCCACTCATGTTACCGTCCCCGACGAACTGGCGAACGTAAACGTAAATCTGTCA
GAGGTTGCATCGTTGATGCCGGTCTCAGTGTGCTTAGTTTGGTTATTGTGAAGAGAGGTG
AGAAGGAGATCCCCGGTCTCACCGACAACACAATCCCAAAACGACTCGGTCCAAAACGTG
CGAGTAAAATCCGCAAGTTGTTCATGTTGGGACCGGATGATGATGTGAGAAAGTATGTGG
TGCGACGTCCACTACCAGCTAAAGAAGGAAAGCCACCAAAGACGAAAGCTCCCAAGATCC
AGCGACTCGTGACGCCACAAAGTGTGCAGAGAAAGAGACATCGTATTGCGATCAAAAGAA
GACGAACTGAACGCGGTCTTCAGGAGGAAGCTGAGTATAAGAAGCTTCTCGCTAAACGAC
TCAAAGTGAGTGCTGAACAAAAAGAGAAGAAGGCAGAAGCTCACAAGAAGCGACGTCTCT
CCAGTTTACGTGCGTCACAATCGCAATCTGTGTCATCACAGTAAAGTCGTTTATTTCGAC
CAAACAGAAAAATAATAAATTAGAAATGAAACATCTTGACCTCATTCTTGCTTTTTAGTT
ATATATGTATATATCCAGGTAACTGCAGTCGTTATAACACAG

InterProScan

PIRSF	Ribosomal_S6_euk (IPR014401) - T[2-251] 4.5E-124
Pfam	Ribosomal_S6e (IPR001377) - T[2-127] 2.1E-63
SMART	Ribosomal_S6e (IPR001377) - T[2-127] 3.9E-86
PANTHER	Ribosomal_S6e (IPR001377) - T[2-247] 2.3E-116
ProSitePatterns	Ribosomal_S6e_CS (IPR018282) - T[53-64] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS6_HUMAN	75.397 %	379	1.59E-134