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TRANSCRIPT CARD

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  1. EST 'BW407972'
  2. Transcript 'Harore.CG.MTP2014.S4...'
  3. Transcript 'KH2012:KH.C7.309.v4....'
  4. Transcript 'KH2012:KH.L40.23.v1....'

Transcript Model

Transcript Id

KH2012:KH.L40.23.v1.A.nonSL30-1

Possible name(s)

RPS6

Location

KhL40 [74,914 / 76,945]

Sequences

Amino acid sequence

Length: 252

>KH.L40.23.v1.A.nonSL30-1
NMKLNISFPATGCQKVFEVDDEQKLRVFYDRRMSQEVSADGLGDEWKGYIVRITGGNDKQ
GFPMKQGVLTAGRVRLLLGKGHSCYRPRRTGERKRKSVRGCIVDAGLSVLSLVIVKRGEK
EIPGLTDNTIPKRLGPKRASKIRKLFMLGPDDDVRKYVVRRPLPAKEGKPPKTKAPKIQR
LVTPQSVQRKRHRIAIKRRRTERGLQEEAEYKKLLAKRLKVSAEQKEKKAEAHKKRRLSS
LRASQSQSVSSQ

Nucleotide sequence

Length: 916

>KH2012:KH.L40.23.v1.A.nonSL30-1
TTTACGCAGTGATGTCTAGCGTTCAGTAGTTTGGGGTGAAATATGAAGTTGAACATATCT
TTCCCCGCAACGGGGTGTCAGAAAGTATTCGAAGTCGACGATGAACAAAAACTTCGCGTC
TTCTACGACCGACGTATGTCACAAGAAGTGTCCGCTGATGGCTTGGGAGACGAGTGGAAG
GGCTACATAGTTCGAATCACTGGAGGTAATGATAAACAAGGCTTCCCGATGAAACAGGGT
GTGCTTACTGCTGGTAGAGTTCGATTGCTACTTGGAAAGGGCCACTCATGTTACCGTCCC
CGACGAACTGGCGAACGTAAACGTAAATCTGTCAGAGGTTGCATCGTTGATGCCGGTCTC
AGTGTGCTTAGTTTGGTTATTGTGAAGAGAGGTGAGAAGGAGATCCCCGGTCTCACCGAC
AACACAATCCCAAAACGACTCGGTCCAAAACGTGCGAGTAAAATCCGCAAGTTGTTCATG
TTGGGACCGGATGATGATGTGAGAAAGTATGTGGTGCGACGTCCACTACCAGCTAAAGAA
GGAAAGCCACCAAAGACGAAAGCTCCCAAGATCCAGCGACTCGTGACGCCACAAAGTGTG
CAGAGAAAGAGACATCGTATTGCGATCAAAAGAAGACGAACTGAACGCGGTCTTCAGGAG
GAAGCTGAGTATAAGAAGCTTCTCGCTAAACGACTCAAAGTGAGTGCTGAACAAAAAGAG
AAGAAGGCAGAAGCTCACAAGAAGCGACGTCTCTCCAGTTTACGTGCGTCACAATCGCAA
TCTGTGTCATCACAGTAAAGTCGTTTATTTCGACCAAACAGAAAAATAATAAATTAGAAA
TGAAACATCTTGACCTCATTCTTGCTTTTTAGTTATATATGTATATATCCAGGTAACTGC
AGTCGTTATAACACAG

InterProScan

PIRSF
Ribosomal_S6_euk (IPR014401) - T[2-251] 4.5E-124
Pfam
Ribosomal_S6e (IPR001377) - T[2-127] 2.1E-63
SMART
Ribosomal_S6e (IPR001377) - T[2-127] 3.9E-86
PANTHER
Ribosomal_S6e (IPR001377) - T[2-247] 2.3E-116
ProSitePatterns
Ribosomal_S6e_CS (IPR018282) - T[53-64] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS6_HUMAN 75.397 % 379 1.59E-134