Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.L40.23.v2.A.SL25-1

Possible name(s)

RPS6

Gene model

KH2012:KH.L40.23

Location

KhL40 [75,444 / 76,945]

Sequences

Amino acid sequence

Length: 205

>KH.L40.23.v2.A.SL25-1
GYIVRITGGNDKQGFPMKQGVLTAGRVRLLLGKGHSCYRPRRTGERKRKSVRGCIVDAGL
SVLSLVIVKRGEKEIPGLTDNTIPKRLGPKRASKIRKLFMLGPDDDVRKYVVRRPLPAKE
GKPPKTKAPKIQRLVTPQSVQRKRHRIAIKRRRTERGLQEEAEYKKLLAKRLKVSAEQKE
KKAEAHKKRRLSSLRASQSQSVSSQ

Nucleotide sequence

Length: 736

>KH2012:KH.L40.23.v2.A.SL25-1
GGCTACATAGTTCGAATCACTGGAGGTAATGATAAACAAGGCTTCCCGATGAAACAGGGT
GTGCTTACTGCTGGTAGAGTTCGATTGCTACTTGGAAAGGGCCACTCATGTTACCGTCCC
CGACGAACTGGCGAACGTAAACGTAAATCTGTCAGAGGTTGCATCGTTGATGCCGGTCTC
AGTGTGCTTAGTTTGGTTATTGTGAAGAGAGGTGAGAAGGAGATCCCCGGTCTCACCGAC
AACACAATCCCAAAACGACTCGGTCCAAAACGTGCGAGTAAAATCCGCAAGTTGTTCATG
TTGGGACCGGATGATGATGTGAGAAAGTATGTGGTGCGACGTCCACTACCAGCTAAAGAA
GGAAAGCCACCAAAGACGAAAGCTCCCAAGATCCAGCGACTCGTGACGCCACAAAGTGTG
CAGAGAAAGAGACATCGTATTGCGATCAAAAGAAGACGAACTGAACGCGGTCTTCAGGAG
GAAGCTGAGTATAAGAAGCTTCTCGCTAAACGACTCAAAGTGAGTGCTGAACAAAAAGAG
AAGAAGGCAGAAGCTCACAAGAAGCGACGTCTCTCCAGTTTACGTGCGTCACAATCGCAA
TCTGTGTCATCACAGTAAAGTCGTTTATTTCGACCAAACAGAAAAATAATAAATTAGAAA
TGAAACATCTTGACCTCATTCTTGCTTTTTAGTTATATATGTATATATCCAGGTAACTGC
AGTCGTTATAACACAG

InterProScan

SMART	Ribosomal_S6e (IPR001377) - T[1-80] 5.7E-36
Pfam	Ribosomal_S6e (IPR001377) - T[1-80] 4.1E-39
PANTHER	Ribosomal_S6e (IPR001377) - T[1-200] 1.3E-90
PIRSF	Ribosomal_S6_euk (IPR014401) - T[1-204] 8.5E-95
ProSitePatterns	Ribosomal_S6e_CS (IPR018282) - T[6-17] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS6_HUMAN	75.243 %	297	3.81E-103