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  1. Clone 'cima025d21'
  2. Transcript 'KH2012:KH.L41.13.v1....'

Transcript Model

Transcript Id

KH2012:KH.L41.13.v1.B.nonSL6-1

Possible name(s)

FZD5; FZD7; SMO

Location

KhL41 [105,799 / 112,708]

Sequences

Amino acid sequence

Length: 505

>KH.L41.13.v1.B.nonSL6-1
NVRKYILVMAAGNSTTAAPSLLDLFNQQPQCNKPSQTGCVDLGNTTCFGSDLPYSQTSFE
LVTDADTLAGVKEKLLLWSGIRAVPLCWDAIQPLLCSVYFPECGENKIQLIDRKVCQATR
QPCKIVEVEYGWPDFLRCDNNDVYADQCESPSTKLLKFNASGCEPPLMATTNPASYYDGV
DGCGLQCMNPLFNEQQHVDMHVFIAVLAGLTCICTLFAMLSFFVDWKNSNKYPARIIFYI
NLCFFMACIGWLAQFFSDARNEIVCRRDGTMRLGEPVGTGESPSCIVIFVLVYFFLMAGI
IWFDILSYSWFIMYKALNTRKDPLVGKTRKFHLAAWCIPFVLVLACLGVSQVDGDSMSGI
CFIGYKNHMYRVGFLLVPVGLVLFIAGFFLLRGLAALFSLKNQQSGLLSDSAVSKITWTM
ARIGIFTLIAFVFVFITFAVHIDGPQLKQKSKPIQNKRNTNHDDTFIGTSPYNYRLDQPK
QQIKVNDNDVGAVFQPPGVLPTLPE

Nucleotide sequence

Length: 2,324

>KH2012:KH.L41.13.v1.B.nonSL6-1
AATGTGAGAAAGTATATATTAGTAATGGCAGCTGGTAACAGCACAACTGCAGCCCCATCG
TTACTGGATCTTTTTAACCAACAACCACAATGTAATAAACCTTCACAAACTGGATGTGTC
GATCTTGGAAATACGACGTGTTTTGGTTCCGATCTCCCATATTCACAAACGTCATTTGAA
CTGGTTACTGATGCTGATACATTGGCTGGTGTAAAAGAAAAGTTGCTGCTTTGGTCAGGC
ATCCGCGCAGTACCTCTATGCTGGGATGCAATCCAACCTCTTCTATGCTCCGTGTACTTC
CCTGAATGTGGAGAAAACAAAATTCAACTTATTGATCGCAAAGTTTGCCAAGCCACCAGA
CAACCATGTAAAATAGTGGAGGTTGAATATGGGTGGCCAGATTTCCTAAGATGTGATAAT
AATGATGTTTATGCAGATCAATGTGAGTCTCCATCCACAAAGTTGTTAAAATTCAATGCA
TCTGGATGTGAACCCCCACTAATGGCAACAACTAACCCTGCCTCATATTATGATGGTGTA
GATGGCTGTGGCTTGCAATGTATGAACCCATTATTTAATGAACAACAACATGTTGATATG
CATGTGTTCATTGCTGTGTTGGCAGGGTTGACTTGCATATGTACTTTATTTGCGATGCTT
TCATTCTTTGTTGATTGGAAAAACTCGAACAAATACCCGGCCCGTATTATATTCTACATC
AACTTGTGTTTCTTCATGGCTTGCATTGGGTGGTTGGCTCAATTCTTCTCCGATGCCCGA
AATGAGATTGTGTGTAGGAGAGATGGAACAATGAGGTTGGGGGAACCTGTTGGAACAGGT
GAATCCCCATCTTGCATAGTCATCTTTGTGTTGGTTTATTTCTTCTTGATGGCCGGCATT
ATATGGTTTGATATCCTCTCATATTCGTGGTTTATTATGTACAAGGCACTCAATACACGC
AAAGATCCGCTTGTAGGGAAGACTCGCAAGTTCCACCTAGCGGCGTGGTGCATCCCGTTT
GTGTTGGTACTTGCTTGTCTTGGAGTATCGCAGGTTGATGGAGATTCTATGAGTGGAATA
TGCTTTATTGGATACAAGAATCATATGTACAGAGTTGGGTTTCTGTTGGTCCCTGTCGGT
CTTGTTTTGTTCATTGCTGGTTTTTTCCTTCTTCGAGGATTAGCTGCGTTATTCTCATTG
AAGAACCAACAATCTGGATTGTTAAGTGACAGTGCTGTATCGAAGATAACGTGGACCATG
GCTAGAATAGGTATCTTTACTTTGATTGCATTTGTGTTCGTATTCATCACGTTTGCCGTC
CATATTGACGGGCCGCAGTTGAAACAGAAATCAAAACCGATCCAAAATAAACGAAACACA
AACCATGATGACACGTTTATCGGAACTTCTCCATATAACTACAGACTGGATCAACCGAAG
CAACAAATTAAAGTTAACGACAACGACGTCGGGGCTGTTTTTCAACCACCAGGTGTCCTA
CCTACCCTCCCTGAATAAACCTTGCCATAGATATCATATCTTATAAACTGCACAATTGCC
ATAGATATCATAATCATTGTTTAACGTTGGGGTAATTAGCCAATTCTGGCCTAAATCTCA
TGTCCCATGGCATGCCATACTGTACAACCTCACCCATTCATATAGAATTGTTTATGGAAC
CTAAATTAATATATTGAAGCAATGGTTTGCAAAGTAATAAATTTCCTAAAGAGCTTTATT
AGACTGATGAAATTACACAAGTTTCTGTACATTTACCTTGTAAATACTTTTCTACCTGTC
GCCTTTTACCACAACTGCCTTTTATACTATCTCTATTTACCGGTACTGCCTAAATGCTTT
TTCTATAGTGCCAATTGAATCGTCCAAACCAATATTTTATACTATCTCCATGGTGCAGTT
ATTAATCATTTTCCGTCCCAATGTTTTGATGCAGTTTTATTAATAATGCAATCATTATAA
CTTCTATAACTTTGTTTTACAAAGTCTAAAAAGTATTTGTTTGTAAGTTGTAACACAAGT
TTAGTATTCAACATTTTATACGAGTGCTTCTCAACCCCTGGGTCACCATTTGATTCAAAT
ACCACAGTGGTCCACAAAGCTTGTTAAAATTTAAATTTTAAGTTTACTGAAAAATTATGA
AGTGGAGTTTTGGAAATTCGTCTGCCAAGGATTTGCTTTAAATTTGTGTTGAATATTTGG
GTCACAAGGTTGAGAAGCATTGCTTGTGTTTGCATGCGGTAAACTTTGAAGTAGAAACCA
AAGAAGCAAACTTGAAATAAAGCTGAACATAAAGTTTGTGCAGT

InterProScan

PANTHER
Frizzled/SFRP (IPR015526) - T[11-442] 1.4E-215
PANTHER
SMO (IPR026544) - T[11-442] 1.4E-215
Gene3D
Frizzled_dom_sf (IPR036790) - T[22-148] 3.3E-37
ProSiteProfiles
Frizzled_dom (IPR020067) - T[34-151] 14.62
SMART
Frizzled_dom (IPR020067) - T[38-153] 2.2E-15
Pfam
Frizzled_dom (IPR020067) - T[39-140] 4.8E-12
SUPERFAMILY
Frizzled_dom_sf (IPR036790) - T[39-147] 1.44E-20
SMART
Frizzled/Smoothened_TM (IPR000539) - T[190-462] 1.2E-92
Pfam
Frizzled/Smoothened_TM (IPR000539) - T[191-444] 4.2E-70
ProSiteProfiles
GPCR_2-like (IPR017981) - T[200-435] 25.406
PRINTS
Frizzled/Smoothened_TM (IPR000539) - T[203-225] 2.5E-40 - T[232-254] 2.5E-40 - T[287-311] 2.5E-40 - T[331-354] 2.5E-40 - T[376-398] 2.5E-40 - T[419-440] 2.5E-40

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FZD5_HUMAN 26.442 % 144 2.07E-37
FZD7_HUMAN 28.288 % 146 4.24E-38
SMO_HUMAN 55.446 % 481 2.61E-163





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