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  1. Transcript 'KH2012:KH.L149.26.v1...'
  2. Clone 'cinc024p21'
  3. Transcript 'KH2012:KH.C5.23.v4.A...'
  4. Transcript 'KH2012:KH.L41.13.v1....'

Transcript Model

Transcript Id

KH2012:KH.L41.13.v1.B.nonSL7-1

Possible name(s)

FZD5; FZD7; SMO

Location

KhL41 [105,799 / 112,760]

Sequences

Amino acid sequence

Length: 507

>KH.L41.13.v1.B.nonSL7-1
PCNVRKYILVMAAGNSTTAAPSLLDLFNQQPQCNKPSQTGCVDLGNTTCFGSDLPYSQTS
FELVTDADTLAGVKEKLLLWSGIRAVPLCWDAIQPLLCSVYFPECGENKIQLIDRKVCQA
TRQPCKIVEVEYGWPDFLRCDNNDVYADQCESPSTKLLKFNASGCEPPLMATTNPASYYD
GVDGCGLQCMNPLFNEQQHVDMHVFIAVLAGLTCICTLFAMLSFFVDWKNSNKYPARIIF
YINLCFFMACIGWLAQFFSDARNEIVCRRDGTMRLGEPVGTGESPSCIVIFVLVYFFLMA
GIIWFDILSYSWFIMYKALNTRKDPLVGKTRKFHLAAWCIPFVLVLACLGVSQVDGDSMS
GICFIGYKNHMYRVGFLLVPVGLVLFIAGFFLLRGLAALFSLKNQQSGLLSDSAVSKITW
TMARIGIFTLIAFVFVFITFAVHIDGPQLKQKSKPIQNKRNTNHDDTFIGTSPYNYRLDQ
PKQQIKVNDNDVGAVFQPPGVLPTLPE

Nucleotide sequence

Length: 2,376

>KH2012:KH.L41.13.v1.B.nonSL7-1
ACATACAAACGTACAGGTACATCCGTCCAAGTTTACCATCAATTAGCCTTGTAATGTGAG
AAAGTATATATTAGTAATGGCAGCTGGTAACAGCACAACTGCAGCCCCATCGTTACTGGA
TCTTTTTAACCAACAACCACAATGTAATAAACCTTCACAAACTGGATGTGTCGATCTTGG
AAATACGACGTGTTTTGGTTCCGATCTCCCATATTCACAAACGTCATTTGAACTGGTTAC
TGATGCTGATACATTGGCTGGTGTAAAAGAAAAGTTGCTGCTTTGGTCAGGCATCCGCGC
AGTACCTCTATGCTGGGATGCAATCCAACCTCTTCTATGCTCCGTGTACTTCCCTGAATG
TGGAGAAAACAAAATTCAACTTATTGATCGCAAAGTTTGCCAAGCCACCAGACAACCATG
TAAAATAGTGGAGGTTGAATATGGGTGGCCAGATTTCCTAAGATGTGATAATAATGATGT
TTATGCAGATCAATGTGAGTCTCCATCCACAAAGTTGTTAAAATTCAATGCATCTGGATG
TGAACCCCCACTAATGGCAACAACTAACCCTGCCTCATATTATGATGGTGTAGATGGCTG
TGGCTTGCAATGTATGAACCCATTATTTAATGAACAACAACATGTTGATATGCATGTGTT
CATTGCTGTGTTGGCAGGGTTGACTTGCATATGTACTTTATTTGCGATGCTTTCATTCTT
TGTTGATTGGAAAAACTCGAACAAATACCCGGCCCGTATTATATTCTACATCAACTTGTG
TTTCTTCATGGCTTGCATTGGGTGGTTGGCTCAATTCTTCTCCGATGCCCGAAATGAGAT
TGTGTGTAGGAGAGATGGAACAATGAGGTTGGGGGAACCTGTTGGAACAGGTGAATCCCC
ATCTTGCATAGTCATCTTTGTGTTGGTTTATTTCTTCTTGATGGCCGGCATTATATGGTT
TGATATCCTCTCATATTCGTGGTTTATTATGTACAAGGCACTCAATACACGCAAAGATCC
GCTTGTAGGGAAGACTCGCAAGTTCCACCTAGCGGCGTGGTGCATCCCGTTTGTGTTGGT
ACTTGCTTGTCTTGGAGTATCGCAGGTTGATGGAGATTCTATGAGTGGAATATGCTTTAT
TGGATACAAGAATCATATGTACAGAGTTGGGTTTCTGTTGGTCCCTGTCGGTCTTGTTTT
GTTCATTGCTGGTTTTTTCCTTCTTCGAGGATTAGCTGCGTTATTCTCATTGAAGAACCA
ACAATCTGGATTGTTAAGTGACAGTGCTGTATCGAAGATAACGTGGACCATGGCTAGAAT
AGGTATCTTTACTTTGATTGCATTTGTGTTCGTATTCATCACGTTTGCCGTCCATATTGA
CGGGCCGCAGTTGAAACAGAAATCAAAACCGATCCAAAATAAACGAAACACAAACCATGA
TGACACGTTTATCGGAACTTCTCCATATAACTACAGACTGGATCAACCGAAGCAACAAAT
TAAAGTTAACGACAACGACGTCGGGGCTGTTTTTCAACCACCAGGTGTCCTACCTACCCT
CCCTGAATAAACCTTGCCATAGATATCATATCTTATAAACTGCACAATTGCCATAGATAT
CATAATCATTGTTTAACGTTGGGGTAATTAGCCAATTCTGGCCTAAATCTCATGTCCCAT
GGCATGCCATACTGTACAACCTCACCCATTCATATAGAATTGTTTATGGAACCTAAATTA
ATATATTGAAGCAATGGTTTGCAAAGTAATAAATTTCCTAAAGAGCTTTATTAGACTGAT
GAAATTACACAAGTTTCTGTACATTTACCTTGTAAATACTTTTCTACCTGTCGCCTTTTA
CCACAACTGCCTTTTATACTATCTCTATTTACCGGTACTGCCTAAATGCTTTTTCTATAG
TGCCAATTGAATCGTCCAAACCAATATTTTATACTATCTCCATGGTGCAGTTATTAATCA
TTTTCCGTCCCAATGTTTTGATGCAGTTTTATTAATAATGCAATCATTATAACTTCTATA
ACTTTGTTTTACAAAGTCTAAAAAGTATTTGTTTGTAAGTTGTAACACAAGTTTAGTATT
CAACATTTTATACGAGTGCTTCTCAACCCCTGGGTCACCATTTGATTCAAATACCACAGT
GGTCCACAAAGCTTGTTAAAATTTAAATTTTAAGTTTACTGAAAAATTATGAAGTGGAGT
TTTGGAAATTCGTCTGCCAAGGATTTGCTTTAAATTTGTGTTGAATATTTGGGTCACAAG
GTTGAGAAGCATTGCTTGTGTTTGCATGCGGTAAACTTTGAAGTAGAAACCAAAGAAGCA
AACTTGAAATAAAGCTGAACATAAAGTTTGTGCAGT

InterProScan

PANTHER
Frizzled/SFRP (IPR015526) - T[12-444] 1.2E-215
PANTHER
SMO (IPR026544) - T[12-444] 1.2E-215
Gene3D
Frizzled_dom_sf (IPR036790) - T[24-150] 3.4E-37
ProSiteProfiles
Frizzled_dom (IPR020067) - T[36-153] 14.62
SMART
Frizzled_dom (IPR020067) - T[40-155] 2.2E-15
SUPERFAMILY
Frizzled_dom_sf (IPR036790) - T[41-149] 1.57E-20
Pfam
Frizzled_dom (IPR020067) - T[41-142] 4.8E-12
SMART
Frizzled/Smoothened_TM (IPR000539) - T[192-464] 1.2E-92
Pfam
Frizzled/Smoothened_TM (IPR000539) - T[193-446] 4.2E-70
ProSiteProfiles
GPCR_2-like (IPR017981) - T[202-437] 25.406
PRINTS
Frizzled/Smoothened_TM (IPR000539) - T[205-227] 2.5E-40 - T[234-256] 2.5E-40 - T[289-313] 2.5E-40 - T[333-356] 2.5E-40 - T[378-400] 2.5E-40 - T[421-442] 2.5E-40

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
FZD5_HUMAN 26.442 % 145 1.96E-37
FZD7_HUMAN 28.288 % 146 4.97E-38
SMO_HUMAN 55.446 % 481 3.18E-163





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