- Transcript 'KH2012:KH.L41.13.v1....'
Transcript Model
Transcript Id
KH2012:KH.L41.13.v1.B.SL1-1
Possible name(s)
FZD5; FZD7; SMO
Gene model
Location
KhL41 [105,799 / 112,744]
Amino acid sequence
Length: 507
>KH.L41.13.v1.B.SL1-1
PCNVRKYILVMAAGNSTTAAPSLLDLFNQQPQCNKPSQTGCVDLGNTTCFGSDLPYSQTS
FELVTDADTLAGVKEKLLLWSGIRAVPLCWDAIQPLLCSVYFPECGENKIQLIDRKVCQA
TRQPCKIVEVEYGWPDFLRCDNNDVYADQCESPSTKLLKFNASGCEPPLMATTNPASYYD
GVDGCGLQCMNPLFNEQQHVDMHVFIAVLAGLTCICTLFAMLSFFVDWKNSNKYPARIIF
YINLCFFMACIGWLAQFFSDARNEIVCRRDGTMRLGEPVGTGESPSCIVIFVLVYFFLMA
GIIWFDILSYSWFIMYKALNTRKDPLVGKTRKFHLAAWCIPFVLVLACLGVSQVDGDSMS
GICFIGYKNHMYRVGFLLVPVGLVLFIAGFFLLRGLAALFSLKNQQSGLLSDSAVSKITW
TMARIGIFTLIAFVFVFITFAVHIDGPQLKQKSKPIQNKRNTNHDDTFIGTSPYNYRLDQ
PKQQIKVNDNDVGAVFQPPGVLPTLPE
Nucleotide sequence
Length: 2,360
>KH2012:KH.L41.13.v1.B.SL1-1
GTACATCCGTCCAAGTTTACCATCAATTAGCCTTGTAATGTGAGAAAGTATATATTAGTA
ATGGCAGCTGGTAACAGCACAACTGCAGCCCCATCGTTACTGGATCTTTTTAACCAACAA
CCACAATGTAATAAACCTTCACAAACTGGATGTGTCGATCTTGGAAATACGACGTGTTTT
GGTTCCGATCTCCCATATTCACAAACGTCATTTGAACTGGTTACTGATGCTGATACATTG
GCTGGTGTAAAAGAAAAGTTGCTGCTTTGGTCAGGCATCCGCGCAGTACCTCTATGCTGG
GATGCAATCCAACCTCTTCTATGCTCCGTGTACTTCCCTGAATGTGGAGAAAACAAAATT
CAACTTATTGATCGCAAAGTTTGCCAAGCCACCAGACAACCATGTAAAATAGTGGAGGTT
GAATATGGGTGGCCAGATTTCCTAAGATGTGATAATAATGATGTTTATGCAGATCAATGT
GAGTCTCCATCCACAAAGTTGTTAAAATTCAATGCATCTGGATGTGAACCCCCACTAATG
GCAACAACTAACCCTGCCTCATATTATGATGGTGTAGATGGCTGTGGCTTGCAATGTATG
AACCCATTATTTAATGAACAACAACATGTTGATATGCATGTGTTCATTGCTGTGTTGGCA
GGGTTGACTTGCATATGTACTTTATTTGCGATGCTTTCATTCTTTGTTGATTGGAAAAAC
TCGAACAAATACCCGGCCCGTATTATATTCTACATCAACTTGTGTTTCTTCATGGCTTGC
ATTGGGTGGTTGGCTCAATTCTTCTCCGATGCCCGAAATGAGATTGTGTGTAGGAGAGAT
GGAACAATGAGGTTGGGGGAACCTGTTGGAACAGGTGAATCCCCATCTTGCATAGTCATC
TTTGTGTTGGTTTATTTCTTCTTGATGGCCGGCATTATATGGTTTGATATCCTCTCATAT
TCGTGGTTTATTATGTACAAGGCACTCAATACACGCAAAGATCCGCTTGTAGGGAAGACT
CGCAAGTTCCACCTAGCGGCGTGGTGCATCCCGTTTGTGTTGGTACTTGCTTGTCTTGGA
GTATCGCAGGTTGATGGAGATTCTATGAGTGGAATATGCTTTATTGGATACAAGAATCAT
ATGTACAGAGTTGGGTTTCTGTTGGTCCCTGTCGGTCTTGTTTTGTTCATTGCTGGTTTT
TTCCTTCTTCGAGGATTAGCTGCGTTATTCTCATTGAAGAACCAACAATCTGGATTGTTA
AGTGACAGTGCTGTATCGAAGATAACGTGGACCATGGCTAGAATAGGTATCTTTACTTTG
ATTGCATTTGTGTTCGTATTCATCACGTTTGCCGTCCATATTGACGGGCCGCAGTTGAAA
CAGAAATCAAAACCGATCCAAAATAAACGAAACACAAACCATGATGACACGTTTATCGGA
ACTTCTCCATATAACTACAGACTGGATCAACCGAAGCAACAAATTAAAGTTAACGACAAC
GACGTCGGGGCTGTTTTTCAACCACCAGGTGTCCTACCTACCCTCCCTGAATAAACCTTG
CCATAGATATCATATCTTATAAACTGCACAATTGCCATAGATATCATAATCATTGTTTAA
CGTTGGGGTAATTAGCCAATTCTGGCCTAAATCTCATGTCCCATGGCATGCCATACTGTA
CAACCTCACCCATTCATATAGAATTGTTTATGGAACCTAAATTAATATATTGAAGCAATG
GTTTGCAAAGTAATAAATTTCCTAAAGAGCTTTATTAGACTGATGAAATTACACAAGTTT
CTGTACATTTACCTTGTAAATACTTTTCTACCTGTCGCCTTTTACCACAACTGCCTTTTA
TACTATCTCTATTTACCGGTACTGCCTAAATGCTTTTTCTATAGTGCCAATTGAATCGTC
CAAACCAATATTTTATACTATCTCCATGGTGCAGTTATTAATCATTTTCCGTCCCAATGT
TTTGATGCAGTTTTATTAATAATGCAATCATTATAACTTCTATAACTTTGTTTTACAAAG
TCTAAAAAGTATTTGTTTGTAAGTTGTAACACAAGTTTAGTATTCAACATTTTATACGAG
TGCTTCTCAACCCCTGGGTCACCATTTGATTCAAATACCACAGTGGTCCACAAAGCTTGT
TAAAATTTAAATTTTAAGTTTACTGAAAAATTATGAAGTGGAGTTTTGGAAATTCGTCTG
CCAAGGATTTGCTTTAAATTTGTGTTGAATATTTGGGTCACAAGGTTGAGAAGCATTGCT
TGTGTTTGCATGCGGTAAACTTTGAAGTAGAAACCAAAGAAGCAAACTTGAAATAAAGCT
GAACATAAAGTTTGTGCAGT
| PANTHER |
Frizzled/SFRP (IPR015526) - T[12-444] 1.2E-215 |
| PANTHER |
SMO (IPR026544) - T[12-444] 1.2E-215 |
| Gene3D |
Frizzled_dom_sf (IPR036790) - T[24-150] 3.4E-37 |
| ProSiteProfiles |
Frizzled_dom (IPR020067) - T[36-153] 14.62 |
| SMART |
Frizzled_dom (IPR020067) - T[40-155] 2.2E-15 |
| SUPERFAMILY |
Frizzled_dom_sf (IPR036790) - T[41-149] 1.57E-20 |
| Pfam |
Frizzled_dom (IPR020067) - T[41-142] 4.8E-12 |
| SMART |
Frizzled/Smoothened_TM (IPR000539) - T[192-464] 1.2E-92 |
| Pfam |
Frizzled/Smoothened_TM (IPR000539) - T[193-446] 4.2E-70 |
| ProSiteProfiles |
GPCR_2-like (IPR017981) - T[202-437] 25.406 |
| PRINTS |
Frizzled/Smoothened_TM (IPR000539) - T[205-227] 2.5E-40 - T[234-256] 2.5E-40 - T[289-313] 2.5E-40 - T[333-356] 2.5E-40 - T[378-400] 2.5E-40 - T[421-442] 2.5E-40 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| FZD5_HUMAN | 26.442 % | 145 | 1.96E-37 |
| FZD7_HUMAN | 28.288 % | 146 | 4.97E-38 |
| SMO_HUMAN | 55.446 % | 481 | 3.18E-163 |