Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.L41.18.v1....'

Transcript Model

Transcript Id

KH2012:KH.L41.18.v1.A.SL1-1

Possible name(s)

UBR1; UBR2; UBR3

Location

KhL41 [64,346 / 72,985]

Sequences

Amino acid sequence

Length: 780

>KH.L41.18.v1.A.SL1-1
PKNRTSMLTSDLNFADYFYYLLKLEADNLHVASSDWSVGSVLNKETSDSILKNISRFILD
GDETEVLLKLKELNNPSNICGRVFRPGEATYTCRSCAVDPTCVFCRECFVRSEHKNHKYK
LHSSSGGGCCDCGDPEAWKQHPACSRHNVDQHHSSDDARTRLPTKLQENGEYFFHTLLKF
VVDMFTVEHTEVLDLPPSLQSSSSVDKFATVVFNDESHTFDYVIGVLSHAVHCTSNRAAD
FATVIDREGRSTVLCGSKTQCRNAKELVTNPLHNSLDTLKTEVMHIYNVVYQEFALEILA
WLTKLAEISEGLRLILCHVLLKPQDNGDSFITMLMMSDTKLWKVARNAYHQLVMSTCLLF
NDQKRIFAVAYVKAYPKLISQYLLDDHEHSESITSISVQLFTVPTLVHYLMVEHNLLNVI
TDTMISVCCVRTSDHREEHEISLKFDPRRLQKNLRRTGFCFYDLKYALTNVPTQWTQAIS
EKFQQFFANFAHYLASMEGMDAVVRKRDRHLEREQEWESGVTMHMRFIPIMRQLYKWCCV
NKATTMECVRCVVGFMKSLYQRENLIKLVPYNGTTYQCVDYDITEKPVSVHYPLTRLLAG
LFVKCGSLGIKFEEIGISFDILSLAEPSMRCLSLCGQVFAGAWRRNGLSLANQVFYCRDY
RCRTESFNRDIQLLQACAANMDPDHFFVAILDKMNLMDDTRLYYKNFLSQHLTSFTEEFI
SILIFVVVERYMVGVGEVTWDEILKREVIHTLGDGAKPHSKIHKYLGEEVRLVCMSVFVL

Nucleotide sequence

Length: 2,343

>KH2012:KH.L41.18.v1.A.SL1-1
CCAAAAAATAGAACAAGCATGTTAACGTCTGACTTAAATTTTGCCGATTATTTTTACTAT
CTGCTGAAACTAGAAGCTGACAACTTACATGTGGCATCCTCTGATTGGTCGGTTGGATCT
GTATTAAACAAAGAAACATCCGACAGTATTTTGAAAAACATTTCAAGATTCATTCTTGAT
GGAGATGAAACAGAGGTTTTGTTAAAGTTGAAAGAACTGAACAACCCTTCAAATATTTGC
GGTCGTGTATTTAGACCTGGTGAAGCAACGTATACCTGCAGATCTTGTGCAGTCGACCCA
ACCTGTGTGTTTTGTAGAGAATGTTTTGTAAGAAGTGAACATAAAAATCACAAGTACAAG
CTTCATTCATCATCTGGAGGAGGATGTTGCGATTGTGGAGATCCTGAGGCGTGGAAACAA
CATCCTGCCTGTTCCCGACACAATGTAGATCAACATCATTCATCGGACGATGCAAGGACA
AGACTTCCAACCAAACTTCAAGAGAATGGAGAATATTTCTTCCACACCTTGCTTAAGTTT
GTGGTTGATATGTTTACTGTTGAACACACTGAAGTATTAGACCTCCCACCAAGCCTGCAA
TCAAGTTCAAGCGTCGACAAGTTTGCCACCGTAGTATTCAATGATGAGTCACATACTTTC
GATTATGTCATCGGAGTGCTGAGTCATGCCGTACATTGCACCAGCAATCGAGCGGCAGAT
TTTGCGACAGTGATCGACCGAGAGGGTAGAAGCACAGTTTTGTGTGGAAGCAAGACCCAG
TGTCGTAATGCAAAAGAATTAGTTACTAACCCTCTCCATAATTCACTAGATACGCTTAAA
ACTGAGGTGATGCATATCTACAATGTTGTGTACCAGGAGTTTGCACTGGAGATATTGGCT
TGGTTAACTAAACTTGCTGAAATATCAGAGGGCCTTCGTTTGATCCTATGCCATGTTTTA
CTGAAACCACAAGACAATGGGGATAGTTTCATCACAATGCTCATGATGAGTGACACAAAG
CTGTGGAAAGTTGCAAGGAATGCTTACCATCAACTTGTAATGTCAACTTGTTTATTGTTC
AACGACCAGAAGCGGATCTTTGCCGTGGCTTACGTCAAAGCTTACCCAAAGTTAATATCT
CAGTATTTGTTGGACGACCATGAACATTCAGAATCCATCACGTCAATATCTGTCCAACTG
TTCACTGTACCTACTTTGGTTCATTACCTCATGGTGGAACACAACCTCCTTAACGTAATC
ACGGACACCATGATTAGCGTATGTTGCGTAAGGACATCGGATCATCGGGAGGAACACGAG
ATCTCCCTCAAGTTTGATCCAAGGAGGCTGCAGAAGAACTTAAGGAGGACGGGATTTTGT
TTCTATGATCTTAAGTACGCCCTTACTAATGTACCAACACAATGGACACAAGCCATCAGT
GAAAAGTTTCAACAATTCTTTGCTAACTTTGCCCATTATCTTGCTTCAATGGAGGGAATG
GACGCGGTTGTTCGTAAACGTGATCGCCACCTTGAGCGTGAACAAGAGTGGGAGAGTGGT
GTGACAATGCATATGAGGTTCATTCCTATTATGAGGCAACTCTATAAATGGTGTTGTGTT
AATAAAGCGACAACGATGGAATGTGTGAGATGCGTTGTTGGCTTCATGAAAAGTTTGTAC
CAGCGTGAAAATCTGATCAAACTCGTTCCTTACAATGGTACCACGTATCAATGTGTTGAT
TATGACATCACAGAGAAACCTGTGTCGGTCCATTATCCTCTAACGAGATTATTAGCGGGA
CTGTTCGTTAAATGTGGAAGCTTGGGCATTAAGTTTGAAGAAATCGGAATTTCTTTTGAT
ATTTTATCGCTTGCTGAGCCCTCTATGCGATGTCTGTCTTTGTGTGGTCAAGTGTTCGCT
GGAGCGTGGAGACGAAACGGTTTATCGCTCGCTAACCAAGTGTTCTATTGCCGTGACTAT
CGGTGCAGAACGGAGTCGTTCAACCGAGACATCCAGTTATTACAAGCGTGCGCCGCCAAC
ATGGACCCCGATCATTTTTTTGTCGCGATTCTCGATAAAATGAATTTAATGGATGACACG
AGATTGTATTACAAGAATTTTCTTTCCCAGCATTTGACTTCATTCACAGAAGAATTCATT
TCCATCTTAATATTTGTGGTGGTTGAGAGGTACATGGTGGGGGTGGGCGAGGTGACATGG
GATGAAATATTGAAGAGGGAAGTTATACATACGTTGGGTGATGGGGCAAAACCTCATTCT
AAGATCCATAAATACCTGGGAGAAGAGGTGAGGCTTGTGTGTATGAGTGTATTTGTATTG
TAG

InterProScan

ProSiteProfiles
Znf_UBR (IPR003126) - T[78-149] 10.613
SMART
Znf_UBR (IPR003126) - T[78-148] 3.2E-26
Pfam
Znf_UBR (IPR003126) - T[80-147] 2.2E-20
SUPERFAMILY
Ribosomal_L7/12_C/ClpS-like (IPR014719) - T[205-270] 4.18E-12
Pfam
ClpS_core (IPR003769) - T[206-270] 2.1E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
UBR1_HUMAN 34.848 % 456 1.87E-141
UBR2_HUMAN 37.637 % 468 5.81E-146