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TRANSCRIPT CARD

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  1. Clone 'cign037l12' > 
  2. Transcript 'Haaura.CG.MTP2014.S2...' > 
  3. Transcript 'KH2012:KH.L41.49.v1....' > 
  4. Clone 'cign065e16' > 
  5. Transcript 'KH2012:KH.L41.49.v2....'

Transcript Model

Transcript Id

KH2012:KH.L41.49.v2.A.nonSL5-1

Possible name(s)

RPL6

Gene model

KH2012:KH.L41.49

Location

KhL41 [112,744 / 115,465]

Sequences

Amino acid sequence

Length: 259

>KH.L41.49.v2.A.nonSL5-1
RSRFWSFRYCAPRMAKKPHAPRNKPLRKGVNRYSRSVMYAKRYAFKHRKNVTKVEKKMDV
THKLKTIGGDKNGSTRFVPTKKMPRYYPTEDVPRKLRSHGKKPFSEHKRKLRSSITPGTV
LILLAGPHRGKRVVFLKQLDTGLLLVTGPHKLNGVPLRRINQVYVIATKTKVDVSGVTIP
KRVNDAYFKRKELSKPKHGEGEIFETDEQKYTVSDERKEDQTAVDKQVLAVLGKDEYMKG
YLTGKFSLQTGQYPHNMVF

Nucleotide sequence

Length: 1,333

>KH2012:KH.L41.49.v2.A.nonSL5-1
TCGATCTCGCTTCTGGAGTTTTAGATATTGTGCTCCAAGGATGGCGAAGAAACCTCATGC
TCCCCGGAACAAACCGCTCCGTAAAGGAGTCAACCGCTACTCGCGCTCTGTGATGTACGC
CAAGCGATACGCTTTCAAACATCGCAAGAATGTCACCAAAGTAGAAAAAAAGATGGACGT
CACCCATAAGCTTAAAACTATTGGTGGAGACAAAAATGGTTCAACCCGATTCGTACCAAC
CAAGAAAATGCCAAGATACTACCCAACCGAGGATGTTCCCCGTAAGTTGAGATCACACGG
GAAGAAACCATTCTCCGAACACAAGAGGAAGTTGCGATCATCCATTACTCCTGGAACCGT
CCTCATCCTACTTGCTGGTCCTCATCGAGGAAAGAGAGTCGTCTTCCTTAAACAACTCGA
CACTGGTTTGCTCTTGGTTACAGGTCCTCATAAATTGAATGGTGTTCCTTTGAGAAGAAT
TAACCAAGTTTATGTGATTGCCACCAAAACGAAGGTTGATGTTTCTGGAGTAACGATCCC
TAAGCGAGTGAACGACGCTTACTTTAAAAGGAAGGAGCTTTCAAAACCTAAACATGGAGA
GGGAGAGATCTTTGAGACTGACGAACAGAAATACACGGTCTCTGATGAGAGAAAAGAAGA
CCAGACTGCAGTTGATAAACAAGTCCTTGCAGTTCTTGGTAAAGATGAATACATGAAGGG
TTACTTGACCGGCAAATTTAGCCTTCAAACTGGCCAATACCCCCACAACATGGTTTTCTA
AACGTTGGGAAGGCGAAATAAATCATTAAAATACAAATGTTGTTATTAAGTGTTACTGGT
TTTTGTCAAATCGCTGTAGCTGAACGTGTACTAGATTGTAGGGAGGATGTAGTTTTAGTA
CAGTGTTATTGATCGTAATCCAAAATATGATGTACGCTACAGTTCGACCATAAACACGAG
GTATAAGAAGTAGCAAGTAAAAAATATGTATAAAAAACGTGTTTTTTTTGTTGTGGTAAC
TGGTAAGTATAAAACTAAGCTTAGATGTTTTGAATGACCCCTTAAATATTTGATGTTTTT
TGTCGGAAATCGTCAGCCATTTGGTTTCCTTATTCGACCGTGACTAAAAAAGTCGGACGA
GCGCAAAGCAGTAGAATATTTTTTCGGTCTGTTTATCGGTATTTCTTCAAAACTACGACT
GAAAAGAAATAATTTGTTAAATTAAAAAAAAGATCGTGTGAATTTTGACTCGTATGTTCA
GTTTTTCGCGCGTAAATTCTCTTAAATACATGTATACGTTCACGCCAACTAAATCTTACA
TACAAACGTACAG

InterProScan

Pfam
Ribosomal_L6_N (IPR005568) - T[14-57] 5.5E-9
PANTHER
60S_ribosomal_L6E (IPR000915) - T[15-259] 1.4E-103
SUPERFAMILY
Translation_prot_SH3-like_sf (IPR008991) - T[112-197] 1.02E-25
Gene3D
Rib_L2_dom2 (IPR014722) - T[113-195] 9.9E-15
Pfam
60S_ribosomal_L6E (IPR000915) - T[152-259] 2.1E-41

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL6_HUMAN 56.911 % 280 9.0E-95