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TRANSCRIPT CARD

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  1. Clone 'cign065e16' > 
  2. Transcript 'KH2012:KH.L41.49.v2....' > 
  3. Clone 'cihA11C4S' > 
  4. Transcript 'KH2012:KH.L41.49.v3....' > 
  5. Transcript 'KH2012:KH.L41.49.v3....'

Transcript Model

Transcript Id

KH2012:KH.L41.49.v3.A.nonSL8-1

Possible name(s)

RPL6

Gene model

KH2012:KH.L41.49

Location

KhL41 [112,744 / 115,470]

Sequences

Amino acid sequence

Length: 253

>KH.L41.49.v3.A.nonSL8-1
ELSSAPRMAKKPHAPRNKPLRKGVNRYSRSVMYAKRYAFKHRKNVTKVEKKMDVTHKLKT
IGGDKNGSTRFVPTKKMPRYYPTEDVPRKLRSHGKKPFSEHKRKLRSSITPGTVLILLAG
PHRGKRVVFLKQLDTGLLLVTGPHKLNGVPLRRINQVYVIATKTKVDVSGVTIPKRVNDA
YFKRKELSKPKHGEGEIFETDEQKYTVSDERKEDQTAVDKQVLAVLGKDEYMKGYLTGKF
SLQTGQYPHNMVF

Nucleotide sequence

Length: 1,353

>KH2012:KH.L41.49.v3.A.nonSL8-1
TCTTTTCGATCTCGCTTCTGGAGTTTTAGATATTGGTGAGAATTAAGCAGTGCTCCAAGG
ATGGCGAAGAAACCTCATGCTCCCCGGAACAAACCGCTCCGTAAAGGAGTCAACCGCTAC
TCGCGCTCTGTGATGTACGCCAAGCGATACGCTTTCAAACATCGCAAGAATGTCACCAAA
GTAGAAAAAAAGATGGACGTCACCCATAAGCTTAAAACTATTGGTGGAGACAAAAATGGT
TCAACCCGATTCGTACCAACCAAGAAAATGCCAAGATACTACCCAACCGAGGATGTTCCC
CGTAAGTTGAGATCACACGGGAAGAAACCATTCTCCGAACACAAGAGGAAGTTGCGATCA
TCCATTACTCCTGGAACCGTCCTCATCCTACTTGCTGGTCCTCATCGAGGAAAGAGAGTC
GTCTTCCTTAAACAACTCGACACTGGTTTGCTCTTGGTTACAGGTCCTCATAAATTGAAT
GGTGTTCCTTTGAGAAGAATTAACCAAGTTTATGTGATTGCCACCAAAACGAAGGTTGAT
GTTTCTGGAGTAACGATCCCTAAGCGAGTGAACGACGCTTACTTTAAAAGGAAGGAGCTT
TCAAAACCTAAACATGGAGAGGGAGAGATCTTTGAGACTGACGAACAGAAATACACGGTC
TCTGATGAGAGAAAAGAAGACCAGACTGCAGTTGATAAACAAGTCCTTGCAGTTCTTGGT
AAAGATGAATACATGAAGGGTTACTTGACCGGCAAATTTAGCCTTCAAACTGGCCAATAC
CCCCACAACATGGTTTTCTAAACGTTGGGAAGGCGAAATAAATCATTAAAATACAAATGT
TGTTATTAAGTGTTACTGGTTTTTGTCAAATCGCTGTAGCTGAACGTGTACTAGATTGTA
GGGAGGATGTAGTTTTAGTACAGTGTTATTGATCGTAATCCAAAATATGATGTACGCTAC
AGTTCGACCATAAACACGAGGTATAAGAAGTAGCAAGTAAAAAATATGTATAAAAAACGT
GTTTTTTTTGTTGTGGTAACTGGTAAGTATAAAACTAAGCTTAGATGTTTTGAATGACCC
CTTAAATATTTGATGTTTTTTGTCGGAAATCGTCAGCCATTTGGTTTCCTTATTCGACCG
TGACTAAAAAAGTCGGACGAGCGCAAAGCAGTAGAATATTTTTTCGGTCTGTTTATCGGT
ATTTCTTCAAAACTACGACTGAAAAGAAATAATTTGTTAAATTAAAAAAAAGATCGTGTG
AATTTTGACTCGTATGTTCAGTTTTTCGCGCGTAAATTCTCTTAAATACATGTATACGTT
CACGCCAACTAAATCTTACATACAAACGTACAG

InterProScan

Pfam
Ribosomal_L6_N (IPR005568) - T[8-51] 5.3E-9
PANTHER
60S_ribosomal_L6E (IPR000915) - T[9-253] 1.3E-103
SUPERFAMILY
Translation_prot_SH3-like_sf (IPR008991) - T[106-191] 9.63E-26
Gene3D
Rib_L2_dom2 (IPR014722) - T[107-189] 9.5E-15
Pfam
60S_ribosomal_L6E (IPR000915) - T[146-253] 2.0E-41

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RL6_HUMAN 56.911 % 280 3.54E-95