- Transcript 'KH2012:KH.L42.6.v1.A...' >
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- Transcript 'KH2012:KH.L42.6.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.L42.6.v1.A.nonSL2-1
Possible name(s)
CNGA2; CNGB1; CNGB3
Gene model
Location
KhL42 [59,389 / 62,017]
Amino acid sequence
Length: 610
>KH.L42.6.v1.A.nonSL2-1
TYGIAHKCNNSEEESLYVIKEFETMDEDGELRISPTVQSSFEKWHRVCEARAHSMHQHLF
EHGDSSSDEETKSEDVRAHKQDDTMFQHEVEQSLFKQIRGYRFPKTINPETDMLYLFWQF
LASLSLVYNAICIPLRTCFPFQTSSNISVWMTVDYLADMTYIVDVFLFQIRRQYILGGVM
QEDPILTKKEYLKSERFKKDVVAMLPTDLLYIAFGVKPAFRINRLVRTNSYFEFNNRFEM
LLKRAYVYRIARTTCYLLYVIHLDACFYYWLSYLSDFKSEWGYLLEGNAYVRCYFWAFMT
TVTIGNVPEPVTTIEYLVQIFNYFAGLFIFSIVIGQVRDSVHSATAEQETYRSQKNSTID
YMQKNHIPVRIQNKVRLWFEYTWNTQRILDETALLKQMPDKMHTDLAINVHMDVLSKVEI
FKECDKQLLYDLLLHLKPILYLPGDYVCKKGEVGREMYIITNGMVQVVGDTSSVVFASLH
PGTAFGEISLLAVGGGNRRTANIYSPGYTTLFILYKNDLNGVLKNHPEAQKILKSKARKM
LKKDNSKKKPAPPVSTVPTPVNTNGGGGLIKTILHVAKMTNIDLKHLKTFSLKNKNAADK
TEKEERNKED
Nucleotide sequence
Length: 2,387
>KH2012:KH.L42.6.v1.A.nonSL2-1
AGAAAGAGAAGAAAGCAGATTAGTGGAAATGCCAGATTAATCTTTAAATCCCCCTTCAAG
TGCAGTGGTTGTGCATGGATTAAACATATGGCATTGCACATAAATGCAACAACAGTGAGG
AGGAGTCATTATACGTTATTAAAGAATTTGAAACCATGGATGAAGATGGAGAATTACGTA
TATCTCCAACTGTGCAAAGCAGTTTTGAAAAATGGCATCGAGTTTGCGAAGCACGTGCAC
ACAGTATGCACCAGCACTTGTTTGAACATGGTGACAGCAGTTCAGATGAAGAAACAAAGT
CGGAAGATGTTCGTGCTCATAAACAGGATGATACCATGTTTCAACATGAAGTTGAGCAGA
GTTTGTTCAAACAAATTCGTGGATACAGATTCCCCAAGACTATTAATCCAGAAACTGATA
TGTTATATTTGTTTTGGCAATTTCTTGCTTCATTATCATTGGTTTATAATGCAATCTGCA
TCCCACTACGCACTTGCTTTCCTTTCCAAACCAGCAGCAATATTTCCGTATGGATGACAG
TGGATTATTTGGCCGATATGACGTATATTGTGGATGTATTTCTGTTTCAAATTCGGCGAC
AGTATATTCTAGGGGGTGTAATGCAAGAAGACCCTATACTAACGAAAAAGGAGTATTTAA
AAAGCGAACGTTTTAAAAAAGATGTCGTCGCAATGTTGCCAACTGACCTGCTGTACATTG
CTTTTGGTGTGAAACCTGCTTTTAGAATAAATCGACTTGTGAGAACCAACTCATATTTTG
AATTCAACAACCGGTTTGAAATGTTGCTGAAACGAGCGTATGTTTATCGTATTGCAAGAA
CCACTTGCTACCTTCTGTATGTAATCCACCTGGATGCCTGCTTCTACTACTGGTTGTCGT
ACCTCAGTGATTTTAAAAGTGAATGGGGTTACTTGTTGGAAGGAAACGCTTATGTCCGCT
GCTATTTTTGGGCGTTTATGACAACGGTTACTATCGGCAACGTACCAGAACCTGTGACAA
CAATTGAATATCTTGTTCAAATATTCAATTATTTTGCCGGGTTGTTTATTTTCTCAATTG
TGATTGGTCAGGTTCGCGATTCAGTGCATTCTGCCACAGCTGAACAAGAAACTTACAGGT
CACAGAAAAATTCAACAATAGATTATATGCAGAAAAATCATATTCCTGTGAGAATTCAAA
ACAAAGTGAGGCTCTGGTTTGAATATACATGGAACACCCAGAGGATTTTGGATGAAACTG
CCTTGCTCAAACAAATGCCAGATAAAATGCACACAGATTTGGCCATCAATGTTCATATGG
ATGTACTCAGTAAAGTTGAGATATTTAAAGAATGTGATAAACAACTTCTGTATGATCTGT
TGCTTCATTTGAAACCAATCCTCTACTTGCCAGGTGACTATGTGTGCAAGAAGGGTGAAG
TTGGAAGGGAAATGTACATTATAACAAATGGCATGGTACAGGTGGTAGGAGATACATCTT
CTGTGGTCTTTGCTTCCTTACATCCTGGGACTGCTTTTGGTGAGATAAGTTTGTTGGCCG
TTGGAGGGGGTAACCGTCGCACTGCCAATATTTACAGTCCAGGTTACACAACTTTATTTA
TTTTGTACAAAAATGACCTGAATGGGGTTCTAAAAAATCACCCAGAGGCTCAAAAAATAC
TGAAGTCTAAAGCGAGAAAAATGCTGAAAAAAGACAACTCCAAGAAAAAGCCGGCTCCAC
CTGTGTCTACCGTGCCCACCCCTGTGAACACAAATGGTGGCGGCGGTCTAATAAAGACAA
TTTTGCACGTGGCAAAAATGACTAACATTGATTTGAAGCATCTCAAAACATTTAGTTTAA
AGAATAAAAATGCCGCTGATAAAACAGAAAAGGAAGAACGCAATAAAGAAGATTAAAACT
TTTCTAAACGTGTCATTTGCTTATTTATTGGGTTTAATGGGTTCAAGGCTCGTCGCTGCT
ACCATTGTGGGCATATGTGTCCTTGGGCAATTGCTTCAATCCAGTGGTCATTAATGGGTT
GTCAAAATTATCAGCTAAACATAATAACAAAAATCCAAAAAACATAATCACCCACAAAGT
AACATGCTCGGTAACTTGTAAGCTGGCATGAGGTGTATAAACACCTCTGTTATAAGGACT
GTCGTTTTCTGGCTACGCGAGGACGAAGTAAGTTATATTCATTCATTCAATATAAAATAA
CAGCGATATCATGTTTTTAAGCTGGTCTGCTGATGTTTACCAAAGTCTTTGTTGTGGTTT
GTACAATGTTTGTTGTTATTGTAAAACAAAACAAATGTTTGCAATAAACCAGTATACTGT
GAGTTGTTTGGAATATTTTTATGCTTTTAGTACTTTAACTTTGTCAG
| SUPERFAMILY |
cNMP-bd-like (IPR018490) - T[347-534] 4.45E-44 |
| Gene3D |
RmlC-like_jellyroll (IPR014710) - T[412-543] 8.4E-34 |
| SMART |
cNMP-bd_dom (IPR000595) - T[420-541] 8.2E-20 |
| ProSiteProfiles |
cNMP-bd_dom (IPR000595) - T[420-523] 22.514 |
| CDD |
cNMP-bd_dom (IPR000595) - T[420-533] 1.03701E-16 |
| Pfam |
cNMP-bd_dom (IPR000595) - T[441-526] 8.8E-14 |
| ProSitePatterns |
cNMP-bd_CS (IPR018488) - T[447-463] . - T[485-505] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CNGB3_HUMAN | 45.455 % | 441 | 1.41E-145 |
| CNGA2_HUMAN | 35.903 % | 325 | 1.41E-102 |
| CNGB1_HUMAN | 49.007 % | 476 | 1.99E-154 |