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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C12.69.v1....' > 
  2. Transcript 'KH2012:KH.L141.36.v1...' > 
  3. Transcript 'Cisavi.CG.ENS81.R88....' > 
  4. Transcript 'KH2012:KH.L67.1.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.L67.1.v1.A.ND2-1

Possible name(s)

RFC2; RFC4; RFC5

Gene model

KH2012:KH.L67.1

Location

KhL67 [63,753 / 67,017]

Sequences

Amino acid sequence

Length: 329

>KH.L67.1.v1.A.ND2-1
RKMSKSTPNLPWVEKYRPESLDDLISHEDILSTISGFLAQNRLPHLLFYGPPGTGKTSTI
LACARKLYSTTQFNSMVLELNASDDRGIGVVRNQILSFASTRTIFNKGFKLIILDEADAM
TKDAQNALRRVMEKFMENTRFCLICNYLTKIIPAIQSRCTRFRFGPLTTDKISSRLEYII
KVEQLNVTEDGLNALVTLANGDMRKALNILQSSSMAYNEVDEDGVYKCTGRPRRDDIKKI
MKWMLNEDYTTAYRSIMELNMTTSMALQDIIEQIHLFVHEVHFPVAVRIYLLDKLADIEH
RLASGTSEKLQLGSLVSAFQHARNIVAAK

Nucleotide sequence

Length: 2,085

>KH2012:KH.L67.1.v1.A.ND2-1
ATTTTTCGCGCTAAATCTACAAGTTTTATTTTTCACAGAAACTTGTCTAATTATTTGCAT
TTATCAAGAATTTTGTCGAATTCTGTGTTTATTTTAATTATTATAAAAAGCTGAATGACG
TAAAATGTCGAAGTCGACGCCTAATCTACCATGGGTGGAGAAATATCGACCAGAATCGCT
CGATGACCTGATTTCACACGAAGATATTTTGAGCACAATATCTGGATTCCTTGCGCAGAA
TAGACTTCCCCACCTTCTGTTTTATGGACCACCAGGCACGGGCAAAACGTCCACAATACT
TGCGTGTGCGCGGAAGTTATATTCGACAACCCAGTTTAACTCGATGGTTCTTGAACTTAA
CGCTTCGGATGATCGAGGGATCGGGGTCGTGAGGAACCAAATCTTAAGCTTCGCGAGCAC
TCGTACAATCTTTAACAAAGGTTTCAAGTTGATTATCCTCGACGAAGCCGATGCGATGAC
GAAAGATGCACAGAATGCGTTGCGGAGGGTGATGGAAAAGTTTATGGAGAACACGAGGTT
TTGTCTCATCTGTAATTACTTGACTAAGATTATTCCTGCCATCCAATCACGATGCACCAG
GTTCAGGTTCGGACCGTTAACCACCGATAAAATAAGTTCAAGGTTGGAATATATCATCAA
GGTTGAACAACTTAATGTCACAGAGGACGGTTTGAATGCTTTGGTGACCTTGGCCAACGG
TGACATGAGGAAAGCTTTAAATATTCTACAAAGTTCATCCATGGCTTATAACGAGGTGGA
TGAGGATGGGGTTTATAAATGCACAGGTCGGCCAAGGAGAGATGATATCAAGAAGATTAT
GAAATGGATGTTAAATGAAGATTACACGACCGCGTATCGATCCATCATGGAACTAAACAT
GACCACCAGCATGGCTCTGCAGGATATCATTGAACAAATCCATTTATTCGTGCACGAGGT
TCATTTCCCCGTGGCCGTGCGGATTTATTTGCTGGACAAACTTGCGGACATCGAACATCG
ACTTGCGTCGGGCACGAGCGAAAAGTTACAACTTGGTTCGTTGGTGTCGGCGTTCCAACA
CGCGAGGAACATCGTGGCAGCGAAGTAAGGTTTGTCGCACGCCCAACTTTTACATTTCCT
GCACAAAATTTAATAAAATAAAATATGACAAATATGACACTCTTATGATGATGTCATAAT
AAGTCATCCCTTTGTTGATGACATCACATTGTGTATTATGACACAAAGTTTGAACCAGTT
TGACTTTTAGGCCTTTTCTCATATTTGGGGTTTTCCCTCCTTTTGTTCAGCCATTGTTTA
CGAGCAAAATCTTAATTACAACTGAATAAACATCACAATGGTTTCGTATTCAGTTACTTT
GTTCTATTGTTACATTACAGTTGGTTGAAAGCAAAAATGAAAGTTGAACAGTCAAATGAG
TGATTGAATGTAACTTATTTATCCTCGCATGACGGGGCAAAGTGTTACATCACAAACGCG
TTTATGAGATTTTGACGGGGCAACGATAGTAGCCATAACTATGGTGTAGAACGTAATGTT
TTAATTTGTTTAAAGTAACAAATTTACGATGAGATATTACAGTGACTACTCGTGTGTGGA
TCTTTAGTTTGTGCAAGGTTGATATTAGAAATAATGGGTGTCTATTATGATTTAAGGTGA
TCTGTGTGTAGAACTACATTTGGTTGGGGCAAGGTGGAACATGTTTTCGTACACTTTTCT
CCTCCCATTTGGTAGTAAACAAAGAATATTTACAGAATAGTATACCTGTCTCCTCACGAC
TCTGAAAGAGCGTTGTTAATTGTTAGGAAATATGGGATATTATATGCTAACGGTATTACG
GTAACCATCTTACCCCACTACTATATAGATGTAAGTCGAATAGTTTTCCTACGGCAATGC
ATTTTCATAAACGTGTTACAACGACTGTCTTTTTACCGCTACTTCCTTTCGCTATTTGTT
TATTACACTACTTTGTTTCCTATTTATTCAATTTCTTAGAAAGCAACGTCACAACTGTTC
AGGTTTTGTTATGAATGGAAATAAATTACCGGCAGAGTTAAAAAA

InterProScan

SUPERFAMILY
P-loop_NTPase (IPR027417) - T[9-228] 4.56E-52
SMART
AAA+_ATPase (IPR003593) - T[42-170] 9.9E-13
Pfam
ATPase_AAA_core (IPR003959) - T[46-163] 2.0E-16
Pfam
Rep_factorC_C (IPR013748) - T[232-317] 9.6E-21
SUPERFAMILY
DNA_pol3_clamp-load_cplx_C (IPR008921) - T[232-323] 5.1E-22

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RFC2_HUMAN 39.159 % 221 4.85E-70
RFC4_HUMAN 39.645 % 231 7.74E-74
RFC5_HUMAN 67.601 % 482 1.1E-172