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  1. Transcript 'KH2012:KH.L70.2.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.L70.2.v1.A.ND1-1

Possible name(s)

AP002373.1; RBM11; RBM7

Gene model

KH2012:KH.L70.2

Location

KhL70 [20,387 / 21,832]

Sequences

Amino acid sequence

Length: 234

>KH.L70.2.v1.A.ND1-1
ESMIVMSGADDACTLFVGNLHDKVTEAILYELFLQAGPIKKVHIPVDHKNGRNRPYGFVT
FKHEVSVPYSIKLMDGIQVFEYSLKVDKRKASGGSGNDTNGDSRPGHSSPRNNLNREAYN
GAGHSGNMTHQPPIMNLNPRMLAQYNPLMMDQGFRDANRRESFETHTRHDRGRWEHDHYQ
GYATPREPHLRRMEDRTSGRYSPYEQNDVRHVTLRSEHRRDSYERRHGQYKRRR

Nucleotide sequence

Length: 1,445

>KH2012:KH.L70.2.v1.A.ND1-1
AACTGGAAAGCTATTGTAGTGTGTGACAACAAAATCAGTTAAAAATATCATATTATTGTT
TTGTACCGACGCTTAGCGTACAGGGTTTTTGGTCTGTCTATATAGAAGTCGATAGCTTTA
GTTTGTTCTCGAATTTCGTTGTAAGAATCGATGATTGTGATGTCAGGGGCCGATGACGCG
TGCACTTTGTTCGTTGGGAATTTACATGATAAAGTAACAGAAGCGATATTGTATGAATTA
TTCCTACAAGCTGGACCCATCAAAAAAGTTCATATCCCAGTCGACCATAAGAACGGAAGA
AATCGTCCGTATGGTTTCGTTACGTTTAAACACGAGGTTTCGGTTCCTTACTCGATAAAA
CTAATGGACGGAATACAAGTGTTTGAATATTCCTTGAAAGTTGATAAAAGGAAAGCTTCA
GGGGGGTCTGGGAACGACACAAACGGTGATTCAAGGCCAGGGCATTCAAGTCCTAGGAAC
AACTTAAATAGGGAAGCTTATAACGGGGCTGGGCATAGCGGTAACATGACACACCAGCCC
CCCATTATGAACCTTAACCCAAGAATGTTAGCCCAGTATAATCCTCTCATGATGGACCAA
GGGTTTAGAGACGCTAACCGACGGGAATCTTTTGAAACGCACACAAGGCACGACAGGGGG
CGATGGGAACACGACCATTACCAAGGTTATGCCACACCAAGGGAACCTCATTTAAGAAGG
ATGGAAGATCGGACTTCAGGAAGATATTCCCCATATGAGCAAAATGATGTCCGTCACGTA
ACTCTTCGTAGCGAGCACAGGAGAGACAGCTATGAGCGACGACATGGCCAATATAAAAGG
CGACGATAGTATTTCTACAATTCGCTTTCAAAGTTTTACACTTTTAGTCGTTTTTAATTT
GATTTTTAAACTTTTTTAGATGCTTTTACGTTAAATAGCAGTTTCTGTTAACCAGGCAAC
TTTAAGGATGATTTTTTACACGTTTTATTTTTTTGTAATATTTTCACAATAACTAGGTTA
ATTATGTTTATAATTTGATTCATAAAATTTGTAAACTGCTGTTGTGTAAATATAGACAGA
TAGTTGTACTTATGTTCTTCAAAAACCTCATTTTTAATTAAGATTAAGCTCAATATTGCA
TTATAATGTTGAGTTTATACCTATTACCAGACAGGGTGCAAAAAGGCGGCAGTTTCATGT
CACCATATGTTGTAATGAATTTTTAATAAACCTAAAACTTAAGAGCAGGCTGGTAATGCT
TTGAATATCAGGTGGGCAACACTGCAAAAATTTAAAAGGCAACACTCAAAAAGAGTTGCA
AACAACTGGATGCACAGGTTTCATTGTACCTGCTGTTTTCCACATAATTTGCATAAATTG
AATTAATTTAAGAAACAACTAAAGAAAGGGTTTAGGGCATTATTCAACAATCTGTTTCTT
TTTAG

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[7-123] 1.2E-21
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[10-117] 7.52E-24
ProSiteProfiles
RRM_dom (IPR000504) - T[13-91] 14.812
SMART
RRM_dom (IPR000504) - T[14-87] 7.8E-19
Pfam
RRM_dom (IPR000504) - T[15-82] 2.1E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SF3B4_HUMAN 43.038 % 76.3 4.32E-16
RBM7_HUMAN 47.872 % 94.4 2.48E-23
RBM11_HUMAN 48.276 % 82.4 1.03E-18