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TRANSCRIPT CARD

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  1. Molecular Tool 'pSoxB2>Orphan bHLH-1'
  2. Transcript 'Phmamm.CG.MTP2014.S1...'
  3. Transcript 'KH2012:KH.L96.28.v4....'

Transcript Model

Transcript Id

KH2012:KH.L96.28.v4.A.SL3-1

Possible name(s)

AL121845.3; TFIP11; ZGPAT

Location

KhL96 [659,223 / 666,844]

Sequences

Amino acid sequence

Length: 687

>KH.L96.28.v4.A.SL3-1
QQWKLQSCYKREKRKGMKLLTKMGYKHGKGLGKGNQGIINPIEALKRTKKAGLGAAGTER
TKQSYIHFPMQDSEGEEEEEFKSELAQWRKGSEPKTKKPKYKYKTVEELTKSGKSVKKKK
DSPERGQSIPNHVANVKVIDMTGKEKKVFTGYHAIAGRVATGSDVESIDEDEYEEEMRKR
DIFSCPELLHNLDTLIEDTEQKILLADRQKRYESDRSVSLEHQKTKLQETLTKEEAEINR
IETVLRTISQCEERLKLDENCEILLNHFAEVFAELQEKYFAEYRMFELSDLASVMVYPLI
TKYLANWNPLNKPTYGINEMKRWKLLLELDKSSFSMQNVSEETDVYQHMMWDVWMPHVRS
SILSWDPHDADPVLNLIESWMPLLPTWMMENLLTQLVLPQLQKEVDCWNPLTDPIPLHSW
IHPWLPHMQERLEPLYGPIRHKLSLALQMWHPRDPSARIILEPWHKVFSRGSWDAFIIKT
ILPKLAKCMEEFIVDPRKQDLSDMECVLSWKNLVPTASMVGILEKHFFNKWLKALSAWLN
GSPDFDEVTQWYLGWKSVFPEPIISNSFVKDRLKQALEMMNRAASGQHRNHDYHHETYEQ
QDTTPAPPPKIAASSASYSTIPSSFKDLIQKRAEERGLLFLQLPRSRDGQTLYKLGGNTI
YIDKQVVFMKMENTFIPVSLQELFDKY

Nucleotide sequence

Length: 2,702

>KH2012:KH.L96.28.v4.A.SL3-1
AAAGACGTGTAATTTAGCTAAACGTAGGTTTAATTGATCCTGCAAACATGGCGGGGGTGT
ACGACTCCGATGAAGGAGACGATGTAGAAGGTTTTAACATTACAAACGATGATTTGATGA
ACGAATTCAATCCAAATCGTCCGAGATTCCGACAAACGAAGGAAGATTCCCTATACGGTA
TATGGGCTGATCAAGAAAAAAGCGGTTGGAGTAAATTCAAGAAGAAAAGCAGTAAGTATT
CTGAACCTGTCAGTTTTGTAAGTGGTGGTCTTAAAGATGAAGATGGACCTCCTATTCCTG
AAGATAAAATGTCCCAGGAAGATACTGAAGAAGTTAAAACAGAAGAAAGTAGTGGGTCGT
TCAAAAAATCATCAAAAACATTCCAAACTACGTCACAAAAGACTTCAAAAACAAATGACA
GCAGTGGAAGCTACAGTCTTGCTACAAAAGGGAAAAAAGAAAAGGTATGAAGCTGCTGAC
AAAGATGGGATATAAACATGGGAAAGGTCTTGGCAAAGGCAACCAAGGAATCATAAATCC
TATCGAAGCGCTCAAAAGAACAAAGAAAGCTGGTCTTGGAGCTGCAGGCACAGAAAGAAC
AAAACAATCTTACATTCATTTCCCAATGCAAGATTCAGAGGGAGAAGAAGAAGAAGAGTT
TAAGTCGGAATTAGCCCAATGGCGAAAAGGTTCTGAACCAAAGACAAAGAAACCAAAATA
CAAATACAAAACAGTGGAAGAGCTGACTAAATCTGGGAAATCAGTGAAAAAGAAAAAAGA
TTCTCCAGAAAGGGGGCAGTCTATTCCTAACCATGTAGCTAATGTTAAAGTCATTGATAT
GACAGGGAAGGAAAAGAAAGTATTCACAGGTTATCATGCAATTGCTGGAAGAGTAGCCAC
TGGATCGGATGTTGAGAGTATAGACGAAGATGAATATGAGGAGGAAATGAGGAAACGAGA
TATCTTCTCATGTCCGGAACTTCTTCATAATCTCGATACGCTCATTGAAGACACAGAGCA
GAAAATTTTACTCGCGGATCGTCAGAAACGTTATGAAAGCGATCGTTCTGTGAGTCTTGA
ACATCAGAAGACTAAACTTCAAGAAACTTTAACAAAAGAAGAAGCAGAAATTAATAGAAT
TGAGACTGTCCTACGTACAATATCTCAATGTGAGGAAAGGTTAAAATTAGATGAAAATTG
TGAGATTCTGCTCAACCATTTCGCTGAAGTGTTCGCTGAATTACAAGAGAAATATTTTGC
TGAATATCGAATGTTTGAACTTTCTGACCTTGCTTCTGTGATGGTTTACCCGTTAATAAC
AAAGTACCTTGCAAATTGGAATCCACTTAACAAGCCAACATATGGAATAAATGAAATGAA
AAGATGGAAATTACTTTTGGAACTTGACAAATCTTCATTTTCTATGCAGAATGTATCTGA
AGAGACTGACGTATACCAACACATGATGTGGGACGTATGGATGCCACATGTCAGGTCTTC
CATCTTATCATGGGATCCTCATGATGCAGATCCAGTCCTTAACCTCATAGAGAGTTGGAT
GCCACTCCTCCCAACCTGGATGATGGAAAACCTCCTTACTCAACTGGTGCTTCCACAACT
ACAGAAAGAGGTGGATTGTTGGAATCCACTTACAGATCCCATTCCCTTACATTCCTGGAT
CCATCCTTGGCTGCCACATATGCAGGAACGACTTGAACCATTATACGGCCCTATTCGTCA
TAAACTGTCCCTTGCATTACAAATGTGGCATCCACGTGATCCGTCTGCAAGAATCATACT
TGAGCCATGGCACAAAGTATTTTCAAGGGGAAGTTGGGACGCTTTTATTATTAAGACAAT
TCTACCCAAACTTGCCAAATGCATGGAAGAATTTATAGTTGATCCCCGTAAGCAAGATCT
AAGTGACATGGAATGTGTTTTATCATGGAAGAACCTTGTACCCACTGCCAGTATGGTTGG
AATACTTGAGAAACATTTCTTTAACAAATGGTTGAAGGCATTGAGTGCTTGGCTAAATGG
TTCACCTGATTTTGATGAAGTCACACAATGGTATCTTGGATGGAAATCAGTTTTCCCGGA
GCCAATTATTTCCAATTCATTTGTGAAGGATCGATTAAAACAAGCATTAGAGATGATGAA
CAGAGCAGCAAGTGGTCAACATAGGAACCATGATTATCATCATGAAACATATGAACAACA
AGACACAACTCCAGCCCCTCCTCCCAAGATTGCGGCTTCCTCCGCCTCTTATTCCACCAT
CCCATCCAGTTTCAAGGATCTTATTCAAAAAAGAGCAGAGGAAAGAGGTCTTCTATTCCT
CCAACTTCCGAGGAGTAGAGATGGGCAAACTCTTTATAAACTTGGAGGAAATACTATTTA
TATCGATAAACAAGTTGTATTCATGAAAATGGAAAATACTTTTATTCCTGTTTCGTTGCA
AGAACTGTTCGACAAATACTAAGAATCCGTTGGGGTTTCATGAAGAGTTTTGCTGCCAAG
TTATAGTGATAAGAAGAGGACCTGTTATTAGAACCTACGTTTTAAAGACTGGGCTCTAAT
ATAGATATATAAACAAGCAAAGGCCATACAAGTTTTACTATCATGCCAACTTCATGTTAC
AAATTGGTTGTTTTTCAATATGTCTTTAATTGAAAATAAAGTCACTTAGACTGTTTAATA
AA

InterProScan

SMART
G_patch_dom (IPR000467) - T[10-56] 3.5E-14
ProSiteProfiles
G_patch_dom (IPR000467) - T[12-58] 15.844
Pfam
G_patch_dom (IPR000467) - T[13-55] 3.1E-15
Pfam
GCFC_dom (IPR022783) - T[265-535] 1.9E-92

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TFP11_HUMAN 43.92 % 583 0