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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.L4.55.v1.A...' > 
  2. Transcript 'KH2012:KH.C2.462.v1....' > 
  3. Transcript 'KH2012:KH.C4.472.v1....' > 
  4. Transcript 'KH2012:KH.C11.159.v1...' > 
  5. Transcript 'KH2012:KH.S115.16.v1...'

Transcript Model

Transcript Id

KH2012:KH.S115.16.v1.A.nonSL2-1

Possible name(s)

PDSS1; PDSS2

Gene model

KH2012:KH.S115.16

Location

KhS115 [205,549 / 209,346]

Sequences

Amino acid sequence

Length: 410

>KH.S115.16.v1.A.nonSL2-1
MTFNYARVNSRIMNIVQCRSILGGLNNLHLPLKRCLSFNGWSKDTNSTMTKVETDAERIV
GFPTSFLSLRALLSDELSAVALHLRKLVRTKHPLLKTARGILFDSKHNVQTRGLIVLLFA
KSIAQHKSASLNLNEIYNSQRTLAELTELIHTAFLVHRGLTGVDTLMKQDSNNSRSEMEL
GNKMAVLSGDFLLANACVALSELRNSKVVNMMSSSIADMSHGFFILPESGDSPDPTSLSI
LPTSRKDWEDAIFLSQGSLISNACLSAVELANQNGEFAECASSFGKNLILAQQARADMQR
ITCINNNTNNNGNFNHYSTELSALPVVLLANKHGGSDWLKNFVYVDDVTNMSLVMKQKLS
SEVSKQNSVLEECEEICRHHRDSALSALNVLPPGEARESLKLLTKTFTAS

Nucleotide sequence

Length: 1,457

>KH2012:KH.S115.16.v1.A.nonSL2-1
AGCGTTTGTTTTCGTGTCAAAGTTAGTAACTCAGGAATATAAATGACGTTCAATTATGCA
AGGGTGAACTCACGTATCATGAATATTGTGCAATGTCGTTCAATACTTGGAGGTTTAAAC
AACCTGCATCTGCCTTTAAAGAGATGTTTATCATTTAATGGTTGGTCCAAAGACACGAAC
AGCACAATGACAAAAGTTGAAACTGACGCCGAGCGCATCGTCGGTTTCCCAACCTCGTTC
CTCAGTCTACGAGCTCTACTGAGCGATGAACTAAGTGCGGTTGCTTTGCATTTGAGGAAA
CTTGTGAGGACAAAACATCCGCTGCTTAAAACTGCAAGAGGAATTCTCTTCGATTCGAAA
CACAATGTTCAAACACGAGGTCTCATCGTTTTACTTTTTGCCAAATCGATTGCACAACAC
AAGAGTGCAAGTTTGAACTTAAATGAGATTTATAATAGCCAAAGAACCTTAGCAGAGTTG
ACAGAGTTGATCCACACAGCGTTCCTGGTTCATCGTGGATTGACAGGCGTTGATACTTTG
ATGAAACAAGATTCAAACAACTCGCGATCCGAAATGGAGTTGGGAAACAAAATGGCGGTT
CTTAGTGGAGACTTCCTACTCGCTAATGCTTGTGTTGCGTTGTCAGAACTTAGGAACTCA
AAAGTGGTCAACATGATGTCATCATCCATAGCAGATATGTCGCACGGGTTCTTCATTCTT
CCCGAGTCCGGTGATTCTCCCGATCCAACATCCTTATCCATCCTCCCAACATCCAGGAAA
GATTGGGAGGACGCCATCTTCCTCTCACAGGGAAGTTTGATCTCTAATGCTTGTCTATCA
GCAGTTGAACTGGCCAATCAAAATGGAGAATTTGCAGAATGTGCTTCAAGTTTCGGGAAA
AATCTTATTCTTGCTCAACAAGCAAGGGCGGACATGCAGAGAATAACTTGTATCAACAAT
AACACCAACAACAATGGAAATTTCAACCATTATTCGACGGAACTTTCCGCTCTACCTGTT
GTTTTGTTGGCCAACAAACACGGAGGTTCTGATTGGTTAAAAAACTTTGTTTATGTTGAT
GATGTCACAAATATGTCATTGGTGATGAAACAAAAGTTGTCATCAGAAGTTTCGAAACAA
AACTCTGTTCTTGAAGAATGTGAAGAAATATGCCGACATCATCGTGACTCTGCATTATCT
GCGCTGAATGTATTACCACCGGGAGAGGCTAGAGAGTCGCTTAAATTATTAACGAAGACA
TTTACAGCTTCGTAATGAATTGTTGCTAGGAAATAAAGATTATTTGATCATATTTAGATT
AATTATAAGTTTCGTGAAGTGACTTGTGTTATTAATGTTCGTTTTCATAGAAACAGCATT
TTTATCAAACTCGCAGATATTTGTCATATTTTAAACTATGTTCTCGCAAAATTCAAATTT
TGTTTTTACATTTTTAG

InterProScan

SUPERFAMILY
Isoprenoid_synthase_dom_sf (IPR008949) - T[59-406] 8.92E-28
Gene3D
Isoprenoid_synthase_dom_sf (IPR008949) - T[66-409] 1.1E-44
Pfam
Polyprenyl_synt (IPR000092) - T[110-301] 4.4E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DLP1_HUMAN 38.338 % 241 5.12E-76