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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C5.546.v2....' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'Harore.CG.MTP2014.S1...' > 
  4. Transcript 'KH2012:KH.L40.13.v1....' > 
  5. Transcript 'KH2012:KH.S115.16.v1...'

Transcript Model

Transcript Id

KH2012:KH.S115.16.v1.A.nonSL5-1

Possible name(s)

PDSS1; PDSS2

Gene model

KH2012:KH.S115.16

Location

KhS115 [205,506 / 209,346]

Sequences

Amino acid sequence

Length: 410

>KH.S115.16.v1.A.nonSL5-1
MTFNYARVNSRIMNIVQCRSILGGLNNLHLPLKRCLSFNGWSKDTNSTMTKVETDAERIV
GFPTSFLSLRALLSDELSAVALHLRKLVRTKHPLLKTARGILFDSKHNVQTRGLIVLLFA
KSIAQHKSASLNLNEIYNSQRTLAELTELIHTAFLVHRGLTGVDTLMKQDSNNSRSEMEL
GNKMAVLSGDFLLANACVALSELRNSKVVNMMSSSIADMSHGFFILPESGDSPDPTSLSI
LPTSRKDWEDAIFLSQGSLISNACLSAVELANQNGEFAECASSFGKNLILAQQARADMQR
ITCINNNTNNNGNFNHYSTELSALPVVLLANKHGGSDWLKNFVYVDDVTNMSLVMKQKLS
SEVSKQNSVLEECEEICRHHRDSALSALNVLPPGEARESLKLLTKTFTAS

Nucleotide sequence

Length: 1,500

>KH2012:KH.S115.16.v1.A.nonSL5-1
ACCCAACATTTCACGTGCAGTTTGTGTTGTTGCATTTGTAGTTAGCGTTTGTTTTCGTGT
CAAAGTTAGTAACTCAGGAATATAAATGACGTTCAATTATGCAAGGGTGAACTCACGTAT
CATGAATATTGTGCAATGTCGTTCAATACTTGGAGGTTTAAACAACCTGCATCTGCCTTT
AAAGAGATGTTTATCATTTAATGGTTGGTCCAAAGACACGAACAGCACAATGACAAAAGT
TGAAACTGACGCCGAGCGCATCGTCGGTTTCCCAACCTCGTTCCTCAGTCTACGAGCTCT
ACTGAGCGATGAACTAAGTGCGGTTGCTTTGCATTTGAGGAAACTTGTGAGGACAAAACA
TCCGCTGCTTAAAACTGCAAGAGGAATTCTCTTCGATTCGAAACACAATGTTCAAACACG
AGGTCTCATCGTTTTACTTTTTGCCAAATCGATTGCACAACACAAGAGTGCAAGTTTGAA
CTTAAATGAGATTTATAATAGCCAAAGAACCTTAGCAGAGTTGACAGAGTTGATCCACAC
AGCGTTCCTGGTTCATCGTGGATTGACAGGCGTTGATACTTTGATGAAACAAGATTCAAA
CAACTCGCGATCCGAAATGGAGTTGGGAAACAAAATGGCGGTTCTTAGTGGAGACTTCCT
ACTCGCTAATGCTTGTGTTGCGTTGTCAGAACTTAGGAACTCAAAAGTGGTCAACATGAT
GTCATCATCCATAGCAGATATGTCGCACGGGTTCTTCATTCTTCCCGAGTCCGGTGATTC
TCCCGATCCAACATCCTTATCCATCCTCCCAACATCCAGGAAAGATTGGGAGGACGCCAT
CTTCCTCTCACAGGGAAGTTTGATCTCTAATGCTTGTCTATCAGCAGTTGAACTGGCCAA
TCAAAATGGAGAATTTGCAGAATGTGCTTCAAGTTTCGGGAAAAATCTTATTCTTGCTCA
ACAAGCAAGGGCGGACATGCAGAGAATAACTTGTATCAACAATAACACCAACAACAATGG
AAATTTCAACCATTATTCGACGGAACTTTCCGCTCTACCTGTTGTTTTGTTGGCCAACAA
ACACGGAGGTTCTGATTGGTTAAAAAACTTTGTTTATGTTGATGATGTCACAAATATGTC
ATTGGTGATGAAACAAAAGTTGTCATCAGAAGTTTCGAAACAAAACTCTGTTCTTGAAGA
ATGTGAAGAAATATGCCGACATCATCGTGACTCTGCATTATCTGCGCTGAATGTATTACC
ACCGGGAGAGGCTAGAGAGTCGCTTAAATTATTAACGAAGACATTTACAGCTTCGTAATG
AATTGTTGCTAGGAAATAAAGATTATTTGATCATATTTAGATTAATTATAAGTTTCGTGA
AGTGACTTGTGTTATTAATGTTCGTTTTCATAGAAACAGCATTTTTATCAAACTCGCAGA
TATTTGTCATATTTTAAACTATGTTCTCGCAAAATTCAAATTTTGTTTTTACATTTTTAG

InterProScan

SUPERFAMILY
Isoprenoid_synthase_dom_sf (IPR008949) - T[59-406] 8.92E-28
Gene3D
Isoprenoid_synthase_dom_sf (IPR008949) - T[66-409] 1.1E-44
Pfam
Polyprenyl_synt (IPR000092) - T[110-301] 4.4E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DLP1_HUMAN 38.338 % 241 5.12E-76