Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.S696.5.v1....' > 
  2. Transcript 'KH2012:KH.C12.142.v1...' > 
  3. Transcript 'KH2012:KH.C8.241.v1....' > 
  4. Transcript 'KH2012:KH.S115.16.v1...'

Transcript Model

Transcript Id

KH2012:KH.S115.16.v1.A.SL4-1

Possible name(s)

PDSS1; PDSS2

Gene model

KH2012:KH.S115.16

Location

KhS115 [205,547 / 209,346]

Sequences

Amino acid sequence

Length: 410

>KH.S115.16.v1.A.SL4-1
MTFNYARVNSRIMNIVQCRSILGGLNNLHLPLKRCLSFNGWSKDTNSTMTKVETDAERIV
GFPTSFLSLRALLSDELSAVALHLRKLVRTKHPLLKTARGILFDSKHNVQTRGLIVLLFA
KSIAQHKSASLNLNEIYNSQRTLAELTELIHTAFLVHRGLTGVDTLMKQDSNNSRSEMEL
GNKMAVLSGDFLLANACVALSELRNSKVVNMMSSSIADMSHGFFILPESGDSPDPTSLSI
LPTSRKDWEDAIFLSQGSLISNACLSAVELANQNGEFAECASSFGKNLILAQQARADMQR
ITCINNNTNNNGNFNHYSTELSALPVVLLANKHGGSDWLKNFVYVDDVTNMSLVMKQKLS
SEVSKQNSVLEECEEICRHHRDSALSALNVLPPGEARESLKLLTKTFTAS

Nucleotide sequence

Length: 1,459

>KH2012:KH.S115.16.v1.A.SL4-1
TTAGCGTTTGTTTTCGTGTCAAAGTTAGTAACTCAGGAATATAAATGACGTTCAATTATG
CAAGGGTGAACTCACGTATCATGAATATTGTGCAATGTCGTTCAATACTTGGAGGTTTAA
ACAACCTGCATCTGCCTTTAAAGAGATGTTTATCATTTAATGGTTGGTCCAAAGACACGA
ACAGCACAATGACAAAAGTTGAAACTGACGCCGAGCGCATCGTCGGTTTCCCAACCTCGT
TCCTCAGTCTACGAGCTCTACTGAGCGATGAACTAAGTGCGGTTGCTTTGCATTTGAGGA
AACTTGTGAGGACAAAACATCCGCTGCTTAAAACTGCAAGAGGAATTCTCTTCGATTCGA
AACACAATGTTCAAACACGAGGTCTCATCGTTTTACTTTTTGCCAAATCGATTGCACAAC
ACAAGAGTGCAAGTTTGAACTTAAATGAGATTTATAATAGCCAAAGAACCTTAGCAGAGT
TGACAGAGTTGATCCACACAGCGTTCCTGGTTCATCGTGGATTGACAGGCGTTGATACTT
TGATGAAACAAGATTCAAACAACTCGCGATCCGAAATGGAGTTGGGAAACAAAATGGCGG
TTCTTAGTGGAGACTTCCTACTCGCTAATGCTTGTGTTGCGTTGTCAGAACTTAGGAACT
CAAAAGTGGTCAACATGATGTCATCATCCATAGCAGATATGTCGCACGGGTTCTTCATTC
TTCCCGAGTCCGGTGATTCTCCCGATCCAACATCCTTATCCATCCTCCCAACATCCAGGA
AAGATTGGGAGGACGCCATCTTCCTCTCACAGGGAAGTTTGATCTCTAATGCTTGTCTAT
CAGCAGTTGAACTGGCCAATCAAAATGGAGAATTTGCAGAATGTGCTTCAAGTTTCGGGA
AAAATCTTATTCTTGCTCAACAAGCAAGGGCGGACATGCAGAGAATAACTTGTATCAACA
ATAACACCAACAACAATGGAAATTTCAACCATTATTCGACGGAACTTTCCGCTCTACCTG
TTGTTTTGTTGGCCAACAAACACGGAGGTTCTGATTGGTTAAAAAACTTTGTTTATGTTG
ATGATGTCACAAATATGTCATTGGTGATGAAACAAAAGTTGTCATCAGAAGTTTCGAAAC
AAAACTCTGTTCTTGAAGAATGTGAAGAAATATGCCGACATCATCGTGACTCTGCATTAT
CTGCGCTGAATGTATTACCACCGGGAGAGGCTAGAGAGTCGCTTAAATTATTAACGAAGA
CATTTACAGCTTCGTAATGAATTGTTGCTAGGAAATAAAGATTATTTGATCATATTTAGA
TTAATTATAAGTTTCGTGAAGTGACTTGTGTTATTAATGTTCGTTTTCATAGAAACAGCA
TTTTTATCAAACTCGCAGATATTTGTCATATTTTAAACTATGTTCTCGCAAAATTCAAAT
TTTGTTTTTACATTTTTAG

InterProScan

SUPERFAMILY
Isoprenoid_synthase_dom_sf (IPR008949) - T[59-406] 8.92E-28
Gene3D
Isoprenoid_synthase_dom_sf (IPR008949) - T[66-409] 1.1E-44
Pfam
Polyprenyl_synt (IPR000092) - T[110-301] 4.4E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
DLP1_HUMAN 38.338 % 241 5.12E-76