- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.S164.15.v1...'
Transcript Model
Transcript Id
KH2012:KH.S164.15.v1.A.SL1-1
Possible name(s)
EDEM1; EDEM2; EDEM3
Gene model
Location
KhS164 [177,654 / 184,502]
Amino acid sequence
Length: 595
>KH.S164.15.v1.A.SL1-1
QGPRENVLHPCLGTNKPIMFRTSFGLITVAHIFMCLIPVGFPSFLNNKSDEKTIFQSEFW
QNYYGERYLHFPESKRLEAKEDARNMFYFGYDNYMKYAFPQDELNPIACCGRGPDLMNPL
NLNINDVLGNFSLTLIDSLDTIAIMGNSSEFKHAVEVVLNQVSFDLDSTVQVFETNIRVL
GSLLSAHLIISDPLQPFGDMRPHDYNGELLSLAHDLAVRLLPAFENTKSGIPYPRVNLRH
GLPNSTITHTATAGAGSLLLEFGTLSRLIGDPTFENVARRAMHELWMRKNSDTGLLGVAI
DVVTGEWMGKQSGVGAGLDSYLEYLLKAYILFGEKRDLDVFDEALQSIKEHLRRGRKHCN
SGSGDPPIYVNVDLSNGMMINTWVDSLQAFLPGLLVLNGDIEEAICCHALYYAIWKRYEA
LPERYNWRLKAPDVRFYPLRPEFIESTYLLYRATKNPFYLNVGREILDSLERHAKTECGY
ASLHNVLDKTQEDRMESFFLSETCKYLYLLFDFENPLHKSSGMLSVFTTEGHLLPVNLKK
PWESDFDFCYAGTTGNKTTSKSKRQCEFIPLERRFSLPLRRDYLRQVHEMVGGVT
Nucleotide sequence
Length: 2,644
>KH2012:KH.S164.15.v1.A.SL1-1
GGGCTGTGATGAAATTTTAAACTTTTATTTCCCTAGCAAGGGCCAAGGGAAAATGTACTG
CACCCCTGCCTTGGCACCAATAAACCAATTATGTTCAGAACTTCCTTTGGGCTAATTACG
GTTGCCCACATTTTTATGTGTCTCATACCAGTTGGATTCCCATCTTTTCTCAACAATAAA
AGTGATGAAAAAACAATTTTTCAATCTGAATTCTGGCAAAACTATTATGGGGAGAGGTAC
CTCCATTTTCCGGAGTCAAAACGCCTTGAAGCAAAAGAAGACGCTCGGAACATGTTCTAC
TTTGGATATGACAACTATATGAAGTATGCTTTTCCCCAAGATGAACTAAACCCGATTGCT
TGCTGTGGCCGGGGACCTGATCTCATGAATCCATTGAATTTGAACATCAACGATGTCTTG
GGTAATTTTTCTCTTACACTTATTGACTCACTGGACACGATTGCCATCATGGGTAACTCC
AGCGAATTCAAACACGCAGTTGAAGTTGTTTTAAACCAAGTTTCATTTGATCTTGATTCA
ACGGTTCAGGTTTTTGAAACCAACATCAGAGTTCTAGGTTCCTTATTATCTGCCCACCTT
ATAATATCTGATCCTCTCCAACCATTTGGAGACATGCGCCCTCATGATTATAATGGTGAA
CTCCTCTCCCTTGCTCATGATCTTGCTGTGCGGTTACTTCCAGCTTTTGAAAACACAAAA
TCTGGAATCCCATATCCAAGGGTTAATTTACGTCACGGTCTTCCTAATTCAACAATCACA
CACACTGCTACAGCTGGTGCAGGATCACTTCTGCTCGAGTTTGGAACCCTCAGTCGATTA
ATTGGCGATCCCACGTTTGAAAATGTGGCACGCCGCGCAATGCATGAACTTTGGATGAGA
AAAAACTCAGATACAGGATTGCTTGGTGTTGCTATAGATGTTGTAACAGGAGAGTGGATG
GGAAAACAAAGTGGTGTAGGGGCTGGGTTAGATTCATATCTTGAATATTTGTTAAAGGCT
TACATTTTATTTGGAGAGAAAAGAGACCTTGATGTGTTCGATGAAGCGTTACAAAGCATC
AAAGAACATCTGAGGCGAGGACGTAAGCATTGCAACAGTGGTTCAGGCGACCCCCCTATT
TATGTAAATGTTGATTTATCAAATGGAATGATGATCAACACGTGGGTGGATTCATTGCAA
GCATTCCTACCTGGATTATTGGTTCTTAATGGCGATATAGAGGAAGCTATATGTTGCCAT
GCGTTGTACTATGCAATATGGAAGCGTTACGAGGCATTACCTGAGCGTTATAACTGGAGA
TTAAAAGCTCCAGATGTAAGGTTCTATCCACTTCGACCTGAGTTTATAGAGAGCACTTAT
CTACTTTACAGGGCCACAAAAAATCCTTTCTACCTCAACGTGGGCCGTGAGATACTTGAT
TCGCTCGAGCGACACGCCAAAACTGAATGTGGTTACGCCTCGCTGCACAATGTGCTCGAC
AAGACGCAAGAGGACAGAATGGAATCTTTCTTCCTCAGTGAAACGTGCAAGTATCTTTAC
CTGTTATTCGATTTTGAAAACCCACTTCACAAAAGCAGTGGTATGCTGAGTGTCTTCACC
ACAGAAGGTCATTTGCTTCCTGTCAATCTAAAGAAACCTTGGGAGTCTGACTTCGACTTC
TGTTATGCAGGAACAACTGGCAATAAAACAACTTCTAAGTCCAAACGGCAATGTGAATTC
ATTCCACTGGAACGCAGATTTTCGCTCCCACTGCGTCGTGACTACCTTCGTCAAGTGCAT
GAGATGGTGGGAGGGGTCACGTGACATAACGTGGGGATAAATGGTCACTGTTACAACACA
ACCACTAAATATGAACCCATATATCGTCCCATTGACTTGAAATTGTTCCAAAAACTAAAA
CCGCCCTCTCAAAAACCTTATCATTTTGTTGAAGAATTTTGTTCAAACCCTACCAAAGTA
ATCTACCTATCAATGGTGTTAGTGAGTCTCATACATGCTTGTTGGCATCTTATACAACAG
TACTGCTGAAACATATTTCGAATCCTGGAATTAAACTATATATATACAGTACGGTGGGAA
AGATGAGACACCTTTATTATATTTTTTCATCCCATTTAGTAGTCAACAAAAAAACATTCG
AGGAATTATAATATACCGTTGTTTATTGTTTAAAACATGATCATGATATTTGGATATTAT
GTGCTAAAGGTGTCCCATTTTCCCCCACCCTACTATAATCCTTATTAACTTTTAAGCATT
CTCTTTAATGCATGTAAAAGGTATAGGTGGTTTTTCATATATTAGATGACCGTTTGTCCC
CAGAAAAAGTGCAATATGTTGTATATATTGAGTGCCTTTTTTTGTACAACTGGTATCAGT
AGTGACTTACTTTGTTCCTTGAAATGTGACAATTATCGAAAAATAAGAGGTTTAGAAGTA
CGTTTTTTTGCATTATTTTTTTTGTTTGTTTGTTATTTGCGAAAGTTTTGTCTTTTTTTT
CCCTTTACACAATCTTGAACAAAATACTCATGAAATATAATACGATGTTTTTTTAAACCT
AAATCTTTTTATTGAGGCCAAATCTTTTATTTATACTAGGTTGGGTAAGATGGTACATTT
TATT
| Gene3D |
6hp_glycosidase-like_sf (IPR012341) - T[70-546] 2.0E-154 |
| SUPERFAMILY |
Seven-hairpin_glycosidases (IPR036026) - T[76-536] 1.14E-144 |
| Pfam |
Glyco_hydro_47 (IPR001382) - T[86-535] 4.5E-119 |
| PRINTS |
Glyco_hydro_47 (IPR001382) - T[86-106] 8.5E-60 - T[132-146] 8.5E-60 - T[169-187] 8.5E-60 - T[223-242] 8.5E-60 - T[315-332] 8.5E-60 - T[383-399] 8.5E-60 - T[438-462] 8.5E-60 - T[497-517] 8.5E-60 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| EDEM3_HUMAN | 43.32 % | 363 | 6.71E-115 |
| EDEM2_HUMAN | 43.363 % | 347 | 2.02E-112 |
| EDEM1_HUMAN | 64.641 % | 716 | 0 |