Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.S164.16.v1.A.ND1-1

Possible name(s)

OTUD4; YOD1

Gene model

KH2012:KH.S164.16

Location

KhS164 [207,384 / 208,715]

Sequences

Amino acid sequence

Length: 299

>KH.S164.16.v1.A.ND1-1
MAALQLRCKTDTGTHRLNAKLFGTSTLGDLQLAIKEAIGVDSNCLKIMIGYPPKPLNLSD
SSVSLNELKIRSGDTFTIVNKEKKNKTVEATVVEPRMLRKEVPADNSCLFYSVFYALQGR
LTKNDYPEAKRLRADIANVVRSNPEEYTEAVLGKTADEYSVWIQCDSSWGGGIELSILSK
IYQVEIAAVDIQTLRVDNYGQNAGYLTRIFLLYDGIHYDPMYLDSGNPSLPTQTIFTTSD
DVALSNAIKVAEGCHKARLYTDTANFNLRCLTCNTLLSGQTGAQKHAKETGHGNFGEVQ

Nucleotide sequence

Length: 1,331

>KH2012:KH.S164.16.v1.A.ND1-1
TGGATTTATTAAGATTGCTAATATTTGTGTATCTGCAATTCTGATAAATGGCGGCACTCC
AATTAAGATGTAAAACAGACACAGGGACTCATAGACTGAATGCAAAGTTGTTTGGAACTT
CAACATTAGGTGATTTGCAACTTGCAATCAAAGAAGCAATTGGTGTGGACAGTAACTGCC
TCAAAATCATGATAGGTTACCCACCAAAGCCCTTAAACTTGTCTGACTCATCTGTCTCAT
TAAACGAATTAAAAATTCGGTCTGGAGATACTTTCACAATTGTTAACAAGGAGAAGAAAA
ACAAAACTGTTGAAGCAACTGTAGTAGAGCCACGGATGTTAAGAAAAGAAGTACCTGCCG
ACAATTCATGCCTGTTTTACAGTGTATTTTATGCCCTGCAGGGAAGATTAACAAAAAATG
ACTACCCGGAAGCCAAACGACTGAGAGCAGACATTGCAAATGTTGTTCGGTCAAACCCTG
AGGAATATACGGAGGCTGTTTTGGGTAAAACGGCTGACGAGTACAGTGTTTGGATTCAAT
GTGATTCTTCCTGGGGTGGAGGGATTGAACTTTCTATTTTATCTAAGATTTACCAGGTCG
AGATCGCAGCTGTGGACATTCAAACTTTGCGGGTTGATAACTATGGTCAAAACGCCGGTT
ACTTGACTCGTATATTCCTTCTCTATGATGGAATTCACTATGACCCAATGTATTTGGACT
CTGGCAACCCTTCTTTACCCACCCAAACTATTTTTACAACATCCGATGACGTTGCTCTCT
CGAATGCAATAAAAGTGGCAGAGGGGTGCCATAAAGCGAGACTATACACAGACACAGCAA
ATTTTAACTTGCGTTGTTTAACATGCAACACTCTGTTATCTGGCCAAACTGGTGCACAAA
AGCATGCTAAAGAGACAGGGCATGGCAATTTTGGGGAAGTTCAATAAAAAAAATATAAAA
AAGTTAAGCTCAAATAATATTGTTTTAGAACACTTAAATGAAATGCATGCTTTACCCCAT
AGTGGTCACATATATATTATTTTATATAGATAACATCCTACAAACAGAAATTTCTGAAAA
AATGGTACATTTACCTACGCTATGCTACAAAAAATATTCAGATTCTTTATTATCCGTTTA
TGCTGTTATCTTGTGTTTTTATTCTTTGTTTGAAGCTTGCTGCTAATATACTGAAACGTT
AAATATCTGTGGGACTATTTTGTTCTCTACCTTTAGAATTTATTTATACTTGTACAACAA
AATACCTTGCACCATTAGAAACAGCTTGACCACTACTATTCTTGATAGTTGTTTCTCTTT
AATTTATAGAG

InterProScan

SUPERFAMILY	Ubiquitin-like_domsf (IPR029071) - T[4-82] 1.48E-6
ProSiteProfiles	OTU_dom (IPR003323) - T[97-224] 11.998
Pfam	OTU_dom (IPR003323) - T[104-196] 3.5E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
OTU1_HUMAN	43.934 %	263	5.65E-87