- Transcript 'Moocci.CG.ELv1_2.S19...' >
- Clone 'cibd047j20' >
- Transcript 'KH2012:KH.S437.3.v1....'
Transcript Model
Transcript Id
KH2012:KH.S437.3.v1.A.SL1-1
Possible name(s)
ZKSCAN8; ZNF570; ZNF79
Gene model
Location
KhS437 [12,363 / 14,205]
Amino acid sequence
Length: 409
>KH.S437.3.v1.A.SL1-1
HLRLRLFFLRLKMADDEATPSVQDLEETLVMIGDKATTIVIDVNDGSYDDDQIFLEEVLQ
DDDGGEIKLEGVSFEEAFKQHGRLTSVKMKQCFICSLAFESHARFVQHVKEVHPVKFRDG
KFHCPVCNYSNKTKPSVEQHLRVHTKEKPFQCQICGKAFNQKAGVVQHMRTHSDEKPYIC
GICDGRFKAHGTLLAHIAMKHQNIKPYTCKECGYSFGHASNLRTHMRTHTGERPYKCNFC
EKTFVQHGHCVTHQRLHTGEKPFKCDYCHGAFTHVGNLRQHVISQHTKDYKHRCQYCNKG
FIGPGDLRRHILTHSVVPVSMVTNMEEQMMQEIGEKEEQSVEHLEHGLEHVEQAGQVGPV
GQVGQVRHNVGHDMDPNIEEIIHEQSGPDSPELEIVQVGGTDLVEAETS
Nucleotide sequence
Length: 1,510
>KH2012:KH.S437.3.v1.A.SL1-1
AGGACTTTAAAATTAATGAACAAAAATATTTAAAATATTAAATGAAACACGTGACATCTA
CGTTTGCGTTTATTTTTTTTAAGATTGAAAATGGCTGATGATGAAGCGACACCGAGTGTT
CAAGATTTGGAGGAAACTTTGGTAATGATCGGCGACAAAGCAACGACGATTGTGATTGAT
GTTAATGACGGCAGTTACGACGATGACCAAATATTCCTTGAGGAAGTTTTACAAGATGAT
GATGGAGGGGAGATCAAGTTGGAGGGGGTCAGTTTCGAGGAAGCGTTCAAACAACATGGA
CGACTCACCTCGGTAAAGATGAAACAATGTTTTATTTGTTCGCTCGCGTTCGAATCCCAT
GCAAGGTTTGTTCAACACGTGAAGGAGGTTCATCCCGTCAAGTTTAGAGATGGAAAGTTT
CATTGCCCAGTTTGTAATTATTCAAATAAAACGAAACCATCAGTCGAACAACATCTGAGG
GTTCATACGAAAGAGAAACCGTTTCAATGCCAAATTTGCGGGAAAGCTTTCAATCAAAAG
GCTGGTGTTGTGCAGCATATGCGAACACACTCTGATGAGAAACCTTATATTTGTGGGATT
TGCGATGGTAGATTCAAAGCACACGGCACACTTCTTGCACACATTGCTATGAAACACCAG
AATATTAAACCTTACACTTGCAAGGAGTGCGGATATTCATTCGGGCACGCAAGTAACCTG
CGTACACACATGCGAACCCACACAGGTGAACGGCCATATAAATGTAACTTCTGTGAGAAA
ACCTTCGTACAACACGGTCACTGTGTCACCCACCAACGGCTCCACACTGGCGAGAAGCCG
TTCAAGTGTGACTATTGTCACGGTGCGTTCACGCACGTCGGAAATCTACGGCAACATGTG
ATCAGCCAACACACCAAGGATTATAAACATAGATGTCAATACTGCAACAAAGGGTTCATT
GGACCAGGGGATCTGAGACGGCATATTCTCACACACTCCGTTGTCCCGGTTTCCATGGTT
ACCAACATGGAGGAACAGATGATGCAGGAGATTGGTGAGAAGGAGGAGCAAAGTGTGGAG
CATCTGGAGCATGGTTTGGAACATGTAGAGCAGGCGGGGCAAGTTGGGCCAGTCGGGCAA
GTTGGGCAGGTTAGGCATAATGTGGGCCACGACATGGATCCGAACATTGAAGAAATCATC
CACGAGCAGAGCGGACCCGACAGTCCCGAGCTGGAGATTGTTCAAGTTGGTGGGACTGAC
TTGGTAGAAGCTGAGACTTCATAAGGAAAAAAGACGTCGTGTTGATTCAAAGCAAACATA
TTGTTTGGATTGTGACATTGCTCATTCTAGACTTCCCAACATCATTGTTTGATTGTGATG
TAACAATGGCAGGGAATATTGGGTTCAAACTCTGAAATTAATAATGTCATATTTTGCATG
CGTGTTTGTTGTTTAACGAGCGTTTGGTTTAAGTTTTAGTGAATATTATTCCCATCTTGT
TTTGTGTTAG
| SMART |
Znf_C2H2_type (IPR013087) - T[90-113] 0.91 - T[122-144] 0.0028 - T[150-172] 1.1E-4 - T[178-201] 0.39 - T[207-229] 1.6E-5 - T[235-257] 0.27 - T[263-286] 0.019 - T[292-314] 0.0011 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[92-113] . - T[152-172] . - T[209-229] . - T[237-257] . - T[265-286] . - T[294-314] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[121-153] 3.4E-6 - T[144-196] 3.75E-17 - T[215-272] 3.68E-20 - T[261-314] 7.11E-11 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[122-149] 12.071 - T[150-177] 16.041 - T[178-206] 9.785 - T[207-234] 17.558 - T[235-262] 15.396 - T[263-291] 10.263 - T[292-315] 9.847 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZKSC8_HUMAN | 40.323 % | 178 | 1.86E-50 |
| ZN570_HUMAN | 35.314 % | 172 | 2.67E-48 |
| ZNF79_HUMAN | 36.429 % | 167 | 5.41E-47 |