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  1. Transcript 'KH2012:KH.C1.174.v1....'
  2. Region 'REG00001501'
  3. Transcript 'KH2012:KH.C8.892.v1....'
  4. Clone 'citb097d16'
  5. Transcript 'KH2012:KH.S514.7.v1....'

Transcript Model

Transcript Id

KH2012:KH.S514.7.v1.B.ND1-1

Possible name(s)

KH.S514.7

Location

KhS514 [5,918 / 9,377]

Sequences

Amino acid sequence

Length: 803

>KH.S514.7.v1.B.ND1-1
DILRLYSLDKIEMFSCEFCPLVLASKGSYFNHRKRKHQNEYLRSLQQNGKGFCCSLCKFS
APSNKDMIYHYNIVHEKGLKLLHEQFAMERDFAAWKENLQTETKTLYVQLKKTRQQMDYE
VIYFGCNRSGKYVPKDDATHCTKSQGTSKFGGKCPVYMIKRTHLSSGLISVEYCSDHVGH
DEEICHLRLSTKIRSKICGKLASGMEPKKVLDYIRDDHRKIDRDAMVTRKDIWNIRKRYH
ISNVEKHENDTQSVDIWIKELSTGNDFNPVVMYKQQGVTDCDLLKDDFVLCLQTEFQKHM
LREFAQKMICIDSTHSTTKFLLTTIMVIDDFGEAIPTAWIISNREDAELLTRAFSALKHK
CGDIMTDIFMSDLANNFYNAWTTVFTIPNKRLYCNWHVDKCWRRMIAKTISNLEDQATVY
AYLKILHCETEEQKFRKMLQEVNDVLGETSPQFLEYFNNSYVLDDKYKLWASCFRIGSIA
NNNMYVEAFHRVLKSVDFSKKQYKGVDNLLMTLIKFSRDKCLEQFIKMPKGKSTHWVAEI
QKRHRLVRTVTGVVSLGENEWKVENPTDHKYTVKKIEPQCLGKCQIKCSMCNVCVHMYTC
TCPDFLMHAVACKHIHAIEISISGGKTFAFQQNRNKEPEVVIENTLVGTSIVRPQSLKAN
LHKYVDKIHEVIDLVDDEDCLKALGKRLVLGVAVAKGMRPTESFPRGTNMSSNKHFDTQK
RFYSTQAKVGRKRKNRLKYPTSSESTELRAKLARITPQLCALCFMSDDRNDTAQVLWRQC
EICDCWLHSTCYSNHDGCPICMS

Nucleotide sequence

Length: 2,820

>KH2012:KH.S514.7.v1.B.ND1-1
CTGGATTATTTAAAACGACAATAAGCTATGATATTACAATACTTTTAGAAACGCAGGGAA
AGTTACGTTTCGTATAACACTAATGAAGAGTCAGACAGATGTTATTGTTTGTTTACAGCT
GTACAGGTTTCAGTAATGTCACATAAACATGCATTACGATTTATTTTTTTTTTAACATGC
GACTAAATATCAGATAATCACTCTTTTCTTTTTACCAGATGTTTCTACGACTCTGGTGTG
ACCAAATTAACTGAAGTACAGTTAAGCGGGAGACATACAGAAAAACGTCATATTTTCAGT
GAGATATATTGAGGTTATATAGTTTAGACAAGATTGAAATGTTTTCCTGTGAATTTTGTC
CGTTGGTGCTCGCCTCGAAAGGTTCCTATTTCAACCATAGAAAGCGAAAGCACCAGAATG
AATACCTGAGATCTCTACAGCAAAATGGAAAAGGTTTTTGCTGTAGCCTATGTAAGTTTA
GTGCACCTAGTAACAAAGACATGATTTATCACTACAACATTGTTCACGAAAAAGGCCTAA
AATTGTTACATGAACAATTTGCCATGGAAAGAGATTTTGCCGCATGGAAAGAAAACTTAC
AAACAGAAACGAAGACTTTGTACGTTCAACTGAAGAAAACCCGTCAACAAATGGATTACG
AAGTGATATACTTTGGTTGTAACAGATCTGGAAAATATGTGCCCAAAGATGATGCTACTC
ATTGTACTAAATCGCAAGGAACTTCAAAATTTGGTGGGAAATGTCCGGTTTACATGATTA
AGCGTACACACTTGTCATCAGGTCTTATTTCAGTGGAATATTGTTCTGATCACGTTGGAC
ACGATGAGGAAATTTGCCACTTGCGTTTGTCCACTAAAATTCGCAGCAAGATTTGTGGAA
AATTGGCAAGCGGGATGGAACCAAAAAAAGTTTTAGACTACATTAGAGACGATCACCGCA
AAATTGATAGAGATGCAATGGTAACAAGGAAAGACATTTGGAACATTCGCAAACGATATC
ATATTTCAAATGTGGAAAAGCATGAAAACGATACACAAAGCGTTGACATTTGGATAAAAG
AACTGTCAACTGGAAACGATTTTAACCCCGTGGTAATGTACAAACAACAAGGAGTTACCG
ATTGCGATTTACTAAAGGACGACTTTGTTTTGTGCTTACAAACAGAATTTCAGAAGCACA
TGTTAAGAGAGTTTGCTCAAAAAATGATTTGCATTGACTCCACACACTCCACCACTAAAT
TTTTGTTAACCACTATTATGGTGATTGATGATTTTGGAGAAGCCATTCCCACAGCTTGGA
TAATTTCTAACAGAGAGGACGCTGAGCTTCTAACTCGTGCCTTCTCTGCGCTAAAACATA
AATGTGGGGATATTATGACGGATATATTCATGAGCGATCTGGCCAACAATTTTTATAATG
CTTGGACAACAGTATTTACAATACCTAACAAAAGACTGTATTGCAACTGGCACGTTGATA
AATGTTGGAGAAGAATGATAGCCAAAACCATTTCAAACTTGGAAGACCAAGCAACCGTAT
ACGCATACCTAAAAATCCTGCACTGTGAAACAGAAGAGCAAAAGTTTCGAAAAATGTTAC
AAGAAGTAAACGATGTTCTTGGTGAAACTTCCCCACAATTTCTCGAATATTTTAATAACA
GTTACGTGTTGGATGATAAATATAAGCTGTGGGCCTCATGTTTTCGGATTGGTTCAATTG
CAAATAACAACATGTACGTCGAAGCATTTCACCGGGTTTTAAAAAGTGTCGATTTTAGCA
AAAAACAGTACAAAGGTGTCGACAACCTGCTGATGACCCTTATAAAATTTTCCAGAGACA
AGTGTTTAGAACAATTTATTAAAATGCCAAAAGGCAAGTCAACTCACTGGGTCGCCGAAA
TACAGAAACGACATAGACTTGTAAGGACGGTAACTGGGGTGGTGTCTTTGGGAGAGAATG
AATGGAAGGTTGAAAACCCAACTGACCATAAGTACACCGTAAAAAAGATTGAACCTCAGT
GTTTAGGAAAATGCCAAATTAAGTGCAGTATGTGTAACGTATGTGTTCATATGTATACAT
GTACTTGCCCGGATTTTTTGATGCACGCAGTTGCATGTAAGCACATTCATGCAATAGAAA
TATCTATTTCAGGAGGCAAAACTTTTGCTTTCCAGCAAAACCGAAACAAAGAACCAGAAG
TTGTTATAGAAAACACTCTTGTTGGAACCTCAATAGTTCGTCCACAATCCTTGAAGGCAA
ATTTACATAAGTATGTCGATAAAATACACGAGGTGATCGATTTAGTTGACGATGAGGATT
GTTTAAAAGCACTGGGTAAACGTTTGGTATTAGGAGTGGCAGTTGCAAAAGGCATGCGAC
CAACAGAATCGTTTCCGCGTGGAACCAACATGTCCTCTAACAAACATTTTGATACCCAAA
AACGATTTTATTCAACGCAGGCTAAGGTGGGAAGAAAAAGGAAAAATCGTCTTAAATATC
CGACCAGCAGCGAAAGCACAGAACTGAGGGCAAAGTTAGCTCGCATCACTCCTCAGCTGT
GCGCATTATGTTTTATGAGTGATGATAGAAACGACACAGCCCAAGTATTGTGGCGACAAT
GTGAAATCTGCGATTGTTGGCTACATTCCACATGCTACTCAAACCATGATGGGTGCCCAA
TCTGCATGTCATAGACTTATTATAATTCCTGTACATTTCAGTCTTTGTGTTATTATAATC
TTGCCACTTATTGGTTGTGCGCTAACAAATATACATTCAGTATTTACATATTTAATCTAG

InterProScan

SMART
Znf_C2H2_type (IPR013087) - T[14-37] 0.1 - T[52-75] 0.84
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[16-37] .
Pfam
MULE_transposase_dom (IPR018289) - T[308-400] 2.8E-10
ProSiteProfiles
Znf_SWIM (IPR007527) - T[591-623] 9.347

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value





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