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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S29...'
  2. Transcript 'Mooccu.CG.ELv1_2.S63...'
  3. Region 'REG00000051'
  4. Region 'REG00001216'
  5. Transcript 'KH2012:KH.S546.2.v1....'

Transcript Model

Transcript Id

KH2012:KH.S546.2.v1.A.nonSL3-1

Possible name(s)

KH.S546.2

Location

KhS546 [22,627 / 24,555]

Sequences

Amino acid sequence

Length: 466

>KH.S546.2.v1.A.nonSL3-1
MATKTNFYRRILPEICINFSSDDGKLIFKEALDNGGMEIFFHLGPQIRTQDEPAYCGLSS
LVIVLNGLAVDPGRVWKGVWRWYHESMLECCTSLEDVQRQGVTIEQLACIAKCNQLNADV
VYVDDHASIDDFRELVKQSCRGSSMAVICSFGRRELGQTGSGHFSPIGGYHPGKDVVLVL
EPARFKYPPYWLSLEALWNAMNTKDPTNGDSPRGYMILEKSNSQPTLLFRISRYFNAINP
LHEDAADFLQKAVKFLKEKPEKPNNSHQVIKDVAENLLKISAEHKLNHEKGILFNTFKKS
QLESMSPEHQTAMFSLVEEIESLELYQYLRDALTNRSCCSEALFDLKKEEQVLVNECGLP
CVLCLPHYMVILLHMLPLFGPNFSTELNQFSLTEEEFKGSYLEAIQVLTRDNNESNCSKS
NCCEEKTNGNTESNKRGKHLLKNEIKELRKQMLSVLNKDAQVSCCI

Nucleotide sequence

Length: 1,511

>KH2012:KH.S546.2.v1.A.nonSL3-1
CATGGCAACTAAGACAAACTTCTATCGGAGAATCTTGCCAGAAATTTGCATCAACTTTTC
TTCTGATGACGGGAAACTAATTTTTAAAGAAGCTTTGGATAATGGGGGCATGGAAATCTT
CTTTCACTTGGGACCACAGATAAGAACACAAGATGAACCTGCTTATTGTGGTTTGTCCTC
GCTGGTAATCGTACTTAATGGTCTAGCAGTTGATCCAGGTCGAGTTTGGAAAGGTGTTTG
GCGTTGGTACCATGAGAGCATGTTGGAGTGTTGTACTTCACTTGAAGACGTACAGAGGCA
AGGAGTTACCATCGAACAGCTGGCTTGTATTGCAAAATGTAATCAACTTAATGCTGATGT
TGTTTATGTTGATGACCATGCAAGTATTGACGACTTCAGAGAACTTGTAAAGCAATCTTG
TAGGGGAAGTTCTATGGCTGTTATTTGCTCGTTTGGGAGAAGAGAACTAGGCCAGACTGG
TTCTGGACACTTTTCTCCCATAGGCGGTTACCATCCTGGGAAAGATGTTGTTTTAGTTCT
CGAACCTGCAAGGTTTAAATATCCGCCATATTGGCTTTCACTAGAAGCATTATGGAATGC
CATGAACACAAAAGATCCAACAAATGGGGATTCTCCAAGGGGGTACATGATATTGGAAAA
ATCCAATTCCCAACCTACATTACTGTTCAGAATATCACGGTATTTTAATGCTATCAACCC
ATTACATGAAGATGCTGCAGATTTCTTGCAAAAAGCTGTTAAGTTCCTAAAGGAAAAGCC
AGAAAAGCCAAACAATTCTCATCAAGTGATAAAAGACGTGGCAGAAAATTTACTTAAAAT
ATCAGCAGAGCACAAGCTAAACCATGAAAAAGGAATACTTTTTAACACCTTCAAGAAATC
ACAACTTGAATCTATGTCACCTGAACATCAAACTGCAATGTTTTCTCTGGTGGAAGAAAT
TGAGTCATTGGAATTATATCAATATTTAAGGGACGCACTAACCAATAGATCATGCTGTAG
TGAAGCTTTGTTTGATTTAAAAAAAGAAGAACAAGTCCTGGTGAATGAATGTGGCTTACC
ATGTGTGTTATGCTTGCCACATTACATGGTCATCTTGCTTCACATGCTTCCACTTTTTGG
GCCAAATTTTTCCACAGAGTTGAACCAGTTTAGTTTAACTGAAGAGGAATTTAAAGGATC
GTATTTAGAAGCTATTCAAGTGTTGACTAGGGATAACAATGAGTCCAATTGTTCAAAGAG
TAACTGCTGCGAAGAAAAAACAAATGGAAACACTGAAAGTAATAAAAGAGGAAAACATTT
GCTTAAAAATGAAATCAAAGAACTTAGAAAGCAAATGTTATCAGTTCTTAATAAAGACGC
CCAAGTTTCATGCTGTATATAATACGGATGTTTTACTGCAAAATTTTACTCAATATTCAT
TTCATACTTTATTATTTTATCTCGTACAACCAAGTTGCTATAATATTGTTTGTAAATTAT
CCAAATTTTAG

InterProScan

ProSiteProfiles
PCS_N (IPR007719) - T[2-223] 41.801
Pfam
PCS_N (IPR007719) - T[7-217] 1.2E-82
Gene3D
PCS_N_sf (IPR038156) - T[15-224] 8.9E-72

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value