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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.1001.v1...'
  2. Transcript 'Boschl.CG.Botznik201...'
  3. Transcript 'Harore.CG.MTP2014.S5...'
  4. Clone 'cien203441'
  5. Transcript 'KH2012:KH.S546.2.v1....'

Transcript Model

Transcript Id

KH2012:KH.S546.2.v1.A.SL2-1

Possible name(s)

KH.S546.2

Location

KhS546 [22,594 / 24,555]

Sequences

Amino acid sequence

Length: 471

>KH.S546.2.v1.A.SL2-1
VGIIIMATKTNFYRRILPEICINFSSDDGKLIFKEALDNGGMEIFFHLGPQIRTQDEPAY
CGLSSLVIVLNGLAVDPGRVWKGVWRWYHESMLECCTSLEDVQRQGVTIEQLACIAKCNQ
LNADVVYVDDHASIDDFRELVKQSCRGSSMAVICSFGRRELGQTGSGHFSPIGGYHPGKD
VVLVLEPARFKYPPYWLSLEALWNAMNTKDPTNGDSPRGYMILEKSNSQPTLLFRISRYF
NAINPLHEDAADFLQKAVKFLKEKPEKPNNSHQVIKDVAENLLKISAEHKLNHEKGILFN
TFKKSQLESMSPEHQTAMFSLVEEIESLELYQYLRDALTNRSCCSEALFDLKKEEQVLVN
ECGLPCVLCLPHYMVILLHMLPLFGPNFSTELNQFSLTEEEFKGSYLEAIQVLTRDNNES
NCSKSNCCEEKTNGNTESNKRGKHLLKNEIKELRKQMLSVLNKDAQVSCCI

Nucleotide sequence

Length: 1,544

>KH2012:KH.S546.2.v1.A.SL2-1
ATGTAGTTTTCTTACTTAAGTAGGGATTATTATCATGGCAACTAAGACAAACTTCTATCG
GAGAATCTTGCCAGAAATTTGCATCAACTTTTCTTCTGATGACGGGAAACTAATTTTTAA
AGAAGCTTTGGATAATGGGGGCATGGAAATCTTCTTTCACTTGGGACCACAGATAAGAAC
ACAAGATGAACCTGCTTATTGTGGTTTGTCCTCGCTGGTAATCGTACTTAATGGTCTAGC
AGTTGATCCAGGTCGAGTTTGGAAAGGTGTTTGGCGTTGGTACCATGAGAGCATGTTGGA
GTGTTGTACTTCACTTGAAGACGTACAGAGGCAAGGAGTTACCATCGAACAGCTGGCTTG
TATTGCAAAATGTAATCAACTTAATGCTGATGTTGTTTATGTTGATGACCATGCAAGTAT
TGACGACTTCAGAGAACTTGTAAAGCAATCTTGTAGGGGAAGTTCTATGGCTGTTATTTG
CTCGTTTGGGAGAAGAGAACTAGGCCAGACTGGTTCTGGACACTTTTCTCCCATAGGCGG
TTACCATCCTGGGAAAGATGTTGTTTTAGTTCTCGAACCTGCAAGGTTTAAATATCCGCC
ATATTGGCTTTCACTAGAAGCATTATGGAATGCCATGAACACAAAAGATCCAACAAATGG
GGATTCTCCAAGGGGGTACATGATATTGGAAAAATCCAATTCCCAACCTACATTACTGTT
CAGAATATCACGGTATTTTAATGCTATCAACCCATTACATGAAGATGCTGCAGATTTCTT
GCAAAAAGCTGTTAAGTTCCTAAAGGAAAAGCCAGAAAAGCCAAACAATTCTCATCAAGT
GATAAAAGACGTGGCAGAAAATTTACTTAAAATATCAGCAGAGCACAAGCTAAACCATGA
AAAAGGAATACTTTTTAACACCTTCAAGAAATCACAACTTGAATCTATGTCACCTGAACA
TCAAACTGCAATGTTTTCTCTGGTGGAAGAAATTGAGTCATTGGAATTATATCAATATTT
AAGGGACGCACTAACCAATAGATCATGCTGTAGTGAAGCTTTGTTTGATTTAAAAAAAGA
AGAACAAGTCCTGGTGAATGAATGTGGCTTACCATGTGTGTTATGCTTGCCACATTACAT
GGTCATCTTGCTTCACATGCTTCCACTTTTTGGGCCAAATTTTTCCACAGAGTTGAACCA
GTTTAGTTTAACTGAAGAGGAATTTAAAGGATCGTATTTAGAAGCTATTCAAGTGTTGAC
TAGGGATAACAATGAGTCCAATTGTTCAAAGAGTAACTGCTGCGAAGAAAAAACAAATGG
AAACACTGAAAGTAATAAAAGAGGAAAACATTTGCTTAAAAATGAAATCAAAGAACTTAG
AAAGCAAATGTTATCAGTTCTTAATAAAGACGCCCAAGTTTCATGCTGTATATAATACGG
ATGTTTTACTGCAAAATTTTACTCAATATTCATTTCATACTTTATTATTTTATCTCGTAC
AACCAAGTTGCTATAATATTGTTTGTAAATTATCCAAATTTTAG

InterProScan

ProSiteProfiles
PCS_N (IPR007719) - T[7-228] 41.801
Pfam
PCS_N (IPR007719) - T[12-222] 1.2E-82
Gene3D
PCS_N_sf (IPR038156) - T[20-229] 9.1E-72

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value