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  1. Transcript 'KH2012:KH.S812.2.v1....'

Transcript Model

Transcript Id

KH2012:KH.S812.2.v1.A.SL1-1

Possible name(s)

HGS; WDFY1; WDFY2

Location

KhS812 [5,444 / 11,569]

Sequences

Amino acid sequence

Length: 411

>KH.S812.2.v1.A.SL1-1
FVIEHFSRVMAAEIMTKPQQRQPILLSRIEDDTQDVVTMAVFTPNEEGIITVSIDKSIRI
WLKRETGQYWPSVCHFIESPCTTMFYSEEPRLMFVGQDNGNVDEFKVSEDYNQITHQRKY
LAHQKQVTGCIFTHQNEVLVVCGKDKYITWHWTKNGQRFGGYQTPSQPMCLQYDHQSHYV
FAGLSNGEITVLKINKNESQLITQLKGHSGSIACLCWDPTHQILYSGSSDKSIIMWDIGS
NKGTAIELQGHTSKVTSLLYASHTQQLLSTGLDGMLVVWNMEIKRNETPVWQEGNQCIKC
KQPFFWNFKQMWSDKTVGLRQHHCRKCGIAVCASCSSKRTTIPLYGFEFEVRVCEECYES
VTEEQKAPTATFHDLKQSVIMLYPDWSKCRFVTSGNDRTIKLWDLKNIVTK

Nucleotide sequence

Length: 2,563

>KH2012:KH.S812.2.v1.A.SL1-1
AGAACGAATAAGTTTCATTCGTTACATGTGAGTTATATTTTCTAATTTGTGATCGAACAC
TTTTCACGAGTCATGGCGGCCGAAATCATGACTAAGCCCCAACAGAGGCAACCAATATTG
CTGAGTCGTATCGAAGACGACACGCAGGATGTTGTTACGATGGCCGTGTTCACGCCAAAC
GAGGAAGGAATTATAACTGTCAGCATTGATAAGTCAATTCGTATCTGGTTAAAAAGGGAA
ACCGGACAATACTGGCCGAGCGTTTGTCATTTTATTGAATCACCTTGCACTACCATGTTT
TACTCAGAAGAACCAAGGTTGATGTTCGTGGGACAAGATAATGGAAATGTTGATGAATTT
AAAGTTTCAGAAGATTACAACCAAATCACACATCAGAGAAAATACCTTGCCCACCAGAAA
CAAGTCACCGGCTGCATCTTCACGCACCAGAACGAGGTCTTGGTTGTTTGTGGGAAAGAT
AAATACATTACGTGGCATTGGACCAAGAATGGGCAACGGTTTGGAGGTTACCAAACACCA
TCCCAACCTATGTGTTTACAGTATGATCACCAATCACATTATGTGTTTGCTGGTTTATCA
AATGGTGAAATTACTGTGTTGAAGATAAATAAGAATGAGAGTCAACTAATAACACAATTG
AAAGGACATTCTGGTTCAATTGCTTGTTTATGTTGGGATCCAACACACCAAATTCTTTAC
TCTGGATCTTCAGACAAGTCTATTATAATGTGGGATATCGGGAGCAATAAAGGAACCGCT
ATTGAACTACAAGGGCATACGAGCAAAGTCACTTCTCTCCTTTACGCAAGCCACACACAA
CAACTATTGTCCACAGGGTTGGATGGGATGTTGGTGGTCTGGAACATGGAGATCAAAAGG
AACGAGACTCCAGTATGGCAGGAGGGCAACCAATGCATTAAATGTAAACAACCTTTCTTT
TGGAACTTTAAACAAATGTGGAGCGATAAGACGGTTGGTTTAAGGCAACATCATTGCAGG
AAATGTGGAATAGCAGTTTGTGCGAGTTGTAGCAGTAAACGAACCACTATTCCTTTGTAC
GGGTTCGAGTTTGAGGTTCGTGTGTGCGAGGAGTGTTACGAATCCGTTACTGAGGAACAA
AAAGCCCCAACTGCTACATTTCATGATTTAAAACAAAGCGTTATAATGCTCTATCCTGAT
TGGTCGAAATGTAGATTCGTAACCAGCGGCAACGACCGTACAATAAAGCTGTGGGACCTA
AAGAACATTGTCACCAAGTGATGGGAAATTTAACGGTCTGGTCTTAATTTTTATTTTACT
TCTTTATCTTCAAATCGAATGTAAATTGTGTAGAAGAATATTTATGTTTGTGAAGTTGTG
CTAATAATACCAGTTCAGCCATCAGTGTTAATACAGCAACAATTTATTTAAATCAACCCA
AGAAATTCGCAAGAAAATTGGTGGCAAATGCCACTGACTACTGTTGTTAACATAAGCTAT
GTTCATAAATTTGCCACCGACTTTTAACTTTACTGTGTCATTAGCATTAGATTTGCCAAA
AAGCCACGGTGAATTTCGTAGCTCACAGAGAGACTTTATAGATTGAACTATATCTTACAA
ATGCAGCACGTAAGGAATTATAAACATATTGCGTTTTAACTGCCTAATTTCTGAACGCTT
TTTCATGATTTTATATTTCAATACTTGATTGTGGGAGACATGAATGATAACTATTCTTAA
CGTTTTAGTTGGTTCTATTACTCTTAAGTTATTTCATAAAATACAATAATTCATTGTTAT
CATATGCAATAATATTTCATTTTTCATCTTTTACTATTGAAGCAATGCAAAAACAACAAC
ACAAATGCTCGCGCGTTGAAACCAGTGCTTCTCAACCTTTTTGTAATGGCAAAAATATTC
AGCATAAACTAATAGCAAAGTTTTGGTGACCAAATTTCCCAAACTACATTTCACACTTTT
CACCATACAATAAATTTTTAAACAAAATTTAAAATAAATGTGAACAACTGTAGTAGGTGA
TCCAACCAAATCAAATCGCAACCCTATTTATATAAAACTATACTTCACACAACTTTTGCA
AGCATACAATGTAAATTTTACAATCACAGTTAAAATGGTTGAGAAGCACTGGTATATAAA
TATCAACTGTGATAAGACTTGATAACTTTGTATATAAAAGTGAAATTCTGATTTTAAAAC
CATACGTGAGGACGTTTGTAATTTCTCGACTTTTGGGTTAAATATGGCTCGATAAAGTAC
AAAACAATAACCTTGAATTGGTTGCACCACTTTTCACATTGGTTTATATAAGTGAAGTTG
TATTTGACCGACACTTTAGTAAAACATAACACCCCAAATCGTTGAACCCAAATGTTCTCA
CCTTATTAAAGTTGTCGTCGTTGTTAATCGTGTTGTTCTTACTTTATAATCTGTGCTTAT
TGCGTTGTTGTGTAATAAAGCTATGTATGAGTCATTTATCACCCATTGTGTTCCTTTGTT
ACATCATATATGCAAACAATACCAAGACAATGAATCATTATTG

InterProScan

Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[14-152] 3.5E-10 - T[153-290] 1.4E-23
SMART
WD40_repeat (IPR001680) - T[22-62] 2.3 - T[113-152] 5.0 - T[198-237] 2.8E-10 - T[241-280] 0.0015 - T[365-404] 1.3
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[31-283] 8.24E-43 - T[366-407] 8.24E-43
PRINTS
G-protein_beta_WD-40_rep (IPR020472) - T[49-63] 9.2E-6 - T[224-238] 9.2E-6 - T[391-405] 9.2E-6
Pfam
WD40_repeat (IPR001680) - T[200-237] 3.3E-7 - T[247-280] 0.051
ProSiteProfiles
WD40_repeat_dom (IPR017986) - T[205-289] 21.568
ProSiteProfiles
WD40_repeat (IPR001680) - T[205-246] 14.953 - T[248-282] 12.246 - T[391-407] 9.239
ProSitePatterns
WD40_repeat_CS (IPR019775) - T[224-238] . - T[267-281] .
SMART
Znf_FYVE (IPR000306) - T[286-363] 2.5E-18
ProSiteProfiles
Znf_FYVE-rel (IPR017455) - T[291-362] 12.32
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[291-362] 5.7E-20
SUPERFAMILY
Znf_FYVE_PHD (IPR011011) - T[293-379] 1.92E-17
Pfam
Znf_FYVE (IPR000306) - T[293-362] 2.4E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
WDFY2_HUMAN 53.367 % 481 3.23E-170
WDFY1_HUMAN 51 % 444 1.93E-155





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