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TRANSCRIPT CARD

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  1. Transcript 'Harore.CG.MTP2014.S2...'
  2. Transcript 'Boschl.CG.Botznik201...'
  3. Transcript 'KH2012:KH.S852.1.v1....'

Transcript Model

Transcript Id

KH2012:KH.S852.1.v1.A.nonSL42-1

Possible name(s)

RPS15

Location

KhS852 [14,974 / 17,114]

Sequences

Amino acid sequence

Length: 127

>KH.S852.1.v1.A.nonSL42-1
GVDLDRLLDMSREQLMDMYCARQRRSFNRGVKRKHNALLKRLRKAKKNTPALEKPEVIKT
HLRNMVIEPEMVGSMVGVYNGKVFNQVEIKPEMIGRYLGEFSITYKPVKHGRPGIGATHS
SRFIPLK

Nucleotide sequence

Length: 403

>KH2012:KH.S852.1.v1.A.nonSL42-1
GTGGTGTCGACCTTGATCGACTACTCGATATGTCCAGGGAGCAACTAATGGATATGTATT
GTGCTCGCCAACGACGATCGTTCAATCGCGGGGTTAAACGCAAGCATAATGCTTTGTTGA
AAAGATTACGTAAGGCAAAGAAAAATACTCCGGCTCTTGAAAAACCTGAAGTTATAAAAA
CTCACCTTCGGAATATGGTTATTGAACCAGAGATGGTCGGAAGCATGGTTGGCGTTTATA
ATGGAAAGGTGTTCAACCAAGTGGAAATAAAGCCGGAGATGATTGGCCGATATTTGGGTG
AATTCAGCATCACATACAAACCAGTGAAGCATGGACGACCCGGTATTGGTGCAACACACT
CATCTAGGTTCATACCACTCAAATAAACAAAATAAATATCATG

InterProScan

PANTHER
Ribosomal_S19 (IPR002222) - T[1-127] 7.8E-68
Gene3D
Ribosomal_S19_SF (IPR023575) - T[1-127] 5.5E-62
TIGRFAM
Ribosomal_S19A/S15e (IPR005713) - T[1-127] 3.6E-62
PIRSF
Ribosomal_S19 (IPR002222) - T[12-127] 9.0E-36
Hamap
Ribosomal_S19 (IPR002222) - T[23-116] 21.249
Pfam
Ribosomal_S19 (IPR002222) - T[25-110] 8.6E-37
SUPERFAMILY
Ribosomal_S19_SF (IPR023575) - T[31-111] 3.92E-30
PRINTS
Ribosomal_S19 (IPR002222) - T[60-79] 2.6E-12 - T[80-92] 2.6E-12 - T[92-107] 2.6E-12
ProSitePatterns
Ribosomal_S19_CS (IPR020934) - T[80-104] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS15_HUMAN 82.677 % 201 5.17E-68