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TRANSCRIPT CARD

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  1. Transcript 'Phmamm.CG.MTP2014.S1...'
  2. Transcript 'KH2012:KH.C4.435.v2....'
  3. Transcript 'Moocul.CG.ELv1_2.S89...'
  4. Transcript 'KH2012:KH.S852.1.v3....'

Transcript Model

Transcript Id

KH2012:KH.S852.1.v3.A.SL7-1

Possible name(s)

RPS15

Location

KhS852 [14,974 / 17,020]

Sequences

Amino acid sequence

Length: 115

>KH.S852.1.v3.A.SL7-1
EQLMDMYCARQRRSFNRGVKRKHNALLKRLRKAKKNTPALEKPEVIKTHLRNMVIEPEMV
GSMVGVYNGKVFNQVEIKPEMIGRYLGEFSITYKPVKHGRPGIGATHSSRFIPLK

Nucleotide sequence

Length: 366

>KH2012:KH.S852.1.v3.A.SL7-1
GGAGCAACTAATGGATATGTATTGTGCTCGCCAACGACGATCGTTCAATCGCGGGGTTAA
ACGCAAGCATAATGCTTTGTTGAAAAGATTACGTAAGGCAAAGAAAAATACTCCGGCTCT
TGAAAAACCTGAAGTTATAAAAACTCACCTTCGGAATATGGTTATTGAACCAGAGATGGT
CGGAAGCATGGTTGGCGTTTATAATGGAAAGGTGTTCAACCAAGTGGAAATAAAGCCGGA
GATGATTGGCCGATATTTGGGTGAATTCAGCATCACATACAAACCAGTGAAGCATGGACG
ACCCGGTATTGGTGCAACACACTCATCTAGGTTCATACCACTCAAATAAACAAAATAAAT
ATCATG

InterProScan

TIGRFAM
Ribosomal_S19A/S15e (IPR005713) - T[1-115] 1.1E-56
PANTHER
Ribosomal_S19 (IPR002222) - T[1-115] 6.2E-62
Gene3D
Ribosomal_S19_SF (IPR023575) - T[1-115] 1.9E-56
PIRSF
Ribosomal_S19 (IPR002222) - T[4-115] 6.5E-36
Hamap
Ribosomal_S19 (IPR002222) - T[11-104] 21.249
Pfam
Ribosomal_S19 (IPR002222) - T[13-98] 6.3E-37
SUPERFAMILY
Ribosomal_S19_SF (IPR023575) - T[19-99] 2.88E-30
PRINTS
Ribosomal_S19 (IPR002222) - T[48-67] 2.2E-12 - T[68-80] 2.2E-12 - T[80-95] 2.2E-12
ProSitePatterns
Ribosomal_S19_CS (IPR020934) - T[68-92] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RS15_HUMAN 82.609 % 180 5.07E-60