- Transcript 'KH2012:KH.S927.2.v1....'
Transcript Model
Transcript Id
KH2012:KH.S927.2.v1.A.SL1-1
Possible name(s)
AP002495.1; L34079.1; XRCC1
Gene model
Location
KhS927 [170 / 1,800]
Amino acid sequence
Length: 480
>KH.S927.2.v1.A.SL1-1
MPQIKLEHVVSFSSEHKEHKVENLLKSGKWKCAKPGEKQSFVVFQFKKATKISSIDIGND
GSAFVEVLVCRSGGEEKYEVLLLASSLMSPLESRTGEGANRVRMFSREKLVSSAAEQIWD
QVKVVCTQPFNKNTMYGLSFIRFNTDEEKPEVLKQETQEKNVKVEITPQKKKVAPTSTSK
AKIQETVIKKEPPNDTSSISKKLAGLKRSAEQRRNEGTPKKKQTLDPGSDLKMDKLLKDV
VIALSGYQNPERGNIRDTAMKMGAQYRKDWTADCTHLICAFPNTPKYTKVIKCGGKVVKH
TWIMDCWSNKKLMNWKSYSLAPVASDDEDKEQSNSPKQKANNVYDESTDAEDSEDTDAEI
DGFLKSDKKEKGSATNGGNVENVKSLPNYFDSLGFCLVGEFSAAVERMLRRHVTVFGGNV
HDSIEDNDVTHVVTQGGWNTELKKRLKSNPSLQFVRPEWVFKCSKSASLLPCAAYAVPRS
Nucleotide sequence
Length: 1,630
>KH2012:KH.S927.2.v1.A.SL1-1
AATGCCACAGATTAAATTAGAGCATGTTGTATCATTCAGCAGTGAACATAAAGAACATAA
AGTCGAGAACCTGCTGAAAAGTGGGAAATGGAAGTGTGCCAAACCTGGCGAAAAACAAAG
TTTTGTTGTTTTCCAGTTTAAAAAAGCGACAAAAATCTCCTCGATTGACATTGGGAATGA
TGGATCGGCATTCGTGGAGGTTTTGGTATGCAGGTCTGGAGGGGAGGAAAAATATGAAGT
TCTTCTTTTAGCATCTTCGTTAATGTCACCACTAGAGAGCAGAACGGGGGAAGGAGCAAA
TCGTGTTCGGATGTTTAGTAGGGAAAAACTTGTGTCCTCGGCTGCAGAACAGATTTGGGA
TCAAGTAAAAGTGGTCTGCACCCAACCGTTTAATAAAAATACAATGTATGGACTTTCATT
CATACGGTTTAACACTGATGAGGAGAAACCTGAGGTTTTAAAACAAGAAACGCAAGAAAA
AAACGTAAAAGTAGAGATTACCCCACAGAAGAAGAAAGTGGCACCCACAAGTACAAGTAA
AGCTAAAATTCAGGAGACTGTAATAAAGAAAGAGCCGCCAAATGATACATCTTCTATAAG
TAAGAAACTTGCTGGTCTCAAGAGGTCTGCAGAGCAAAGGAGGAATGAAGGAACTCCGAA
GAAAAAGCAAACTTTGGATCCTGGTTCTGACTTGAAAATGGATAAATTACTAAAAGATGT
TGTAATTGCTCTAAGTGGATACCAGAACCCTGAAAGGGGAAATATCCGTGATACAGCAAT
GAAAATGGGGGCACAGTACAGAAAAGATTGGACTGCTGATTGCACCCACTTGATTTGCGC
ATTTCCAAACACACCTAAATACACAAAGGTCATTAAATGCGGTGGTAAGGTGGTCAAGCA
TACATGGATCATGGATTGTTGGAGTAATAAAAAGTTAATGAACTGGAAAAGTTACAGCTT
GGCGCCAGTTGCCAGCGACGACGAGGACAAAGAACAATCAAATTCACCGAAGCAAAAGGC
GAACAATGTGTACGATGAATCAACAGACGCTGAAGACAGTGAAGACACTGACGCCGAGAT
AGACGGATTTTTAAAAAGTGACAAAAAAGAAAAAGGCAGTGCAACTAACGGTGGTAATGT
AGAAAATGTTAAAAGTTTGCCCAACTATTTCGACAGCCTTGGATTTTGCCTGGTCGGCGA
GTTTTCTGCGGCAGTAGAACGCATGTTACGACGTCATGTTACAGTGTTCGGCGGCAATGT
GCACGATTCTATTGAAGATAACGATGTCACTCATGTTGTAACACAAGGAGGTTGGAACAC
AGAGTTAAAAAAGCGGCTAAAGTCAAACCCTTCTCTACAATTCGTGCGCCCGGAGTGGGT
TTTTAAATGCAGTAAATCTGCCAGTTTATTGCCCTGTGCAGCATACGCAGTTCCGCGCTC
ATAATTTGTAGCAATTGTGTTGTAACTGCTGTTACTGGCGCAAAAGTGACGGTAAAGCAA
ATTTAATTGTAAAACGTAAACCTCCTGCGTTGGTTTATGGCCTAATTAGTCACCGGTTTG
AACACCAAAGCAGTTTAAATATATCACTGTAGAACTTGGGCGTTTAAGACTTGAATGATG
GACTTATTTT
| SUPERFAMILY |
Galactose-bd-like_sf (IPR008979) - T[1-145] 1.06E-51 |
| Gene3D |
Galactose-bd-like_sf (IPR008979) - T[1-146] 7.0E-61 |
| Pfam |
Xrcc1_N (IPR002706) - T[1-143] 3.7E-60 |
| Gene3D |
BRCT_dom_sf (IPR036420) - T[230-319] 6.2E-26 - T[378-479] 6.8E-20 |
| ProSiteProfiles |
BRCT_dom (IPR001357) - T[232-320] 15.927 - T[385-477] 17.095 |
| SMART |
BRCT_dom (IPR001357) - T[234-310] 7.2E-14 - T[387-467] 0.012 |
| SUPERFAMILY |
BRCT_dom_sf (IPR036420) - T[234-320] 1.03E-24 - T[386-477] 1.57E-15 |
| CDD |
BRCT_dom (IPR001357) - T[239-307] 3.81181E-11 - T[395-463] 1.6753E-5 |
| Pfam |
BRCT_dom (IPR001357) - T[240-302] 4.0E-15 - T[387-475] 4.8E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| XRCC1_HUMAN | 56.329 % | 177 | 4.95E-49 |