- Transcript 'KH2012:KH.S966.7.v1....'
Transcript Model
Transcript Id
KH2012:KH.S966.7.v1.A.nonSL10-1
Possible name(s)
ABCB5; ABCB6; ABCB7
Gene model
Location
KhS966 [7,814 / 9,774]
Amino acid sequence
Length: 624
>KH.S966.7.v1.A.nonSL10-1
SVGLLNKQCVRRQMPGPSSVVGGGASVELGSKKLLKFMSSYIWPKDNSLVRRRVVLSLSL
LVSAKLLNVQVPFLFKYAVDALSEVGLNTSTTSAAVFSSVFCLILAYGGARMTTALFNEL
RDAVFARVAQRSIRNIARQLFAHLHNLDLKFHLSRQTGAVSKAVDRGTRGINFLFRALVF
NIVPTIFEVSLVSSILWYKCGGQFAFVTLATIASYATWTLGVTAWRTKYRIQMNKSDNQM
GNLAVDSLLNYETVKYFNNENFEVQRYDKCLANYEEANIKTNMSLALLNFGQQFIFSAGL
TAIMFLAAQGIQTGSLTVGDLVMVNGLLFQLSVPLNFLGSVYRDIKQSLIDMQSMFSLME
QKVSITNLPQAPMIDLQPNDVSIKFENVSFGYTGDKLILNDLNFAVEPGQSIGIVGGSGS
GKSTIVRLLYRFYDPASGRILIGDNDIKQVNLESMRQHIGIVPQDTVLFHDTIYHNISYG
NLKASEAEIIEAAKMADVHHSILNMPHGYKTHVGERGLKLSGGEKQRIAIARAILKNPTL
VVYDEATSSLDSITEENILSAIRRVTQTKTAIFIAHRLSTVMACDEIYVLAEGKVSERGT
HQQLLGDKNSLYYELWKSQNKIVG
Nucleotide sequence
Length: 1,960
>KH2012:KH.S966.7.v1.A.nonSL10-1
ATCTGTTGGTTTGTTGAATAAACAATGTGTCCGACGGCAGATGCCGGGTCCCAGCTCAGT
GGTGGGTGGGGGGGCCTCCGTGGAATTGGGGTCAAAGAAATTGTTAAAGTTTATGTCGTC
CTACATCTGGCCCAAAGATAATTCCTTAGTTCGAAGACGAGTTGTTTTGTCACTATCATT
GTTGGTGAGCGCAAAACTATTAAACGTCCAAGTTCCGTTCCTGTTCAAGTACGCGGTGGA
TGCGTTAAGTGAAGTTGGATTGAACACAAGCACCACGAGCGCTGCCGTGTTTTCATCTGT
GTTTTGCCTCATACTCGCATATGGGGGTGCCAGGATGACGACAGCTTTGTTTAACGAATT
GCGTGATGCAGTATTTGCGAGGGTCGCGCAACGGTCGATACGAAATATTGCCCGCCAATT
ATTCGCTCACCTTCACAACCTTGACCTTAAGTTTCATCTTAGCCGACAAACTGGGGCCGT
ATCGAAAGCAGTGGACCGTGGAACTCGGGGAATCAACTTCCTTTTTCGTGCGCTTGTGTT
TAACATCGTACCAACCATATTTGAGGTCTCGTTGGTTAGTTCGATCCTTTGGTATAAATG
TGGAGGTCAGTTTGCATTTGTTACCCTGGCAACCATAGCGAGCTATGCAACATGGACACT
TGGTGTTACAGCGTGGAGGACAAAATATCGAATTCAAATGAACAAATCCGACAACCAGAT
GGGGAACTTGGCTGTGGATTCGCTGCTAAATTATGAAACCGTGAAATATTTTAACAACGA
AAATTTTGAAGTGCAAAGATACGACAAATGTTTAGCAAATTATGAAGAAGCAAATATTAA
AACCAACATGTCGCTTGCGTTGTTAAACTTTGGACAACAATTCATATTTAGCGCCGGTTT
AACAGCTATAATGTTTCTTGCCGCTCAAGGTATTCAAACGGGCAGTTTAACAGTTGGTGA
TCTGGTGATGGTTAACGGACTTTTGTTTCAACTTTCAGTCCCCTTAAATTTCCTCGGTTC
GGTTTATCGTGACATCAAGCAATCATTGATTGACATGCAATCCATGTTCAGTTTGATGGA
ACAAAAAGTTTCCATCACCAACCTTCCACAAGCCCCCATGATTGATCTACAACCCAACGA
TGTTTCAATCAAGTTTGAAAACGTTTCCTTTGGTTACACGGGCGACAAACTAATTCTTAA
CGACCTTAATTTCGCTGTCGAGCCCGGACAAAGTATTGGCATTGTGGGTGGAAGCGGCAG
TGGGAAATCGACAATCGTCAGGTTGTTATATCGTTTCTATGATCCTGCATCAGGTCGAAT
ATTAATCGGTGACAACGATATTAAACAAGTCAACCTTGAAAGTATGCGGCAACATATTGG
TATTGTACCACAAGATACCGTGTTATTTCATGATACAATTTATCATAATATATCATACGG
AAACCTTAAAGCAAGTGAAGCCGAGATAATTGAAGCAGCCAAGATGGCCGACGTCCATCA
TTCAATCCTCAACATGCCCCATGGTTACAAGACCCATGTGGGTGAACGGGGGTTGAAACT
TTCAGGGGGTGAAAAACAACGGATCGCGATCGCTCGAGCGATTCTTAAGAACCCGACGCT
GGTTGTTTACGATGAAGCGACTTCGTCATTAGACTCGATCACAGAAGAAAACATCCTGAG
TGCGATCAGGCGCGTCACACAAACCAAAACGGCGATATTTATCGCGCATAGATTGTCCAC
GGTCATGGCTTGCGACGAGATTTATGTTTTGGCCGAGGGGAAAGTATCAGAGCGTGGAAC
GCATCAACAATTATTGGGCGATAAAAACTCATTGTATTACGAACTATGGAAAAGTCAAAA
CAAAATTGTCGGTTAAAGTTGTTTTTAAAGTTTTATGCAGTTCATCTATGCATGATTTTA
TAATGATTGTAAAAATAAATAGTTAACTTAACATTGATAG
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[33-360] 1.57E-55 |
| Gene3D |
ABC1_TM_sf (IPR036640) - T[41-370] 7.3E-134 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[55-334] 7.4E-36 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[55-347] 40.563 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[374-619] 1.63E-87 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[383-617] 23.463 |
| Pfam |
ABC_transporter-like (IPR003439) - T[399-548] 1.5E-34 |
| SMART |
AAA+_ATPase (IPR003593) - T[408-593] 3.3E-15 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[520-534] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCB5_HUMAN | 31.157 % | 235 | 2.29E-66 |
| ABCB6_HUMAN | 42.007 % | 462 | 1.63E-153 |
| ABCB7_HUMAN | 57.596 % | 731 | 0 |