- Transcript 'Phmamm.CG.MTP2014.S9...' >
- Transcript 'KH2012:KH.L5.2.v1.A....' >
- Transcript 'KH2012:KH.C8.284.v3....' >
- Region 'REG00000075' >
- Transcript 'KH2012:KH.S966.7.v1....'
Transcript Model
Transcript Id
KH2012:KH.S966.7.v1.A.nonSL5-1
Possible name(s)
ABCB5; ABCB6; ABCB7
Gene model
Location
KhS966 [7,640 / 9,774]
Amino acid sequence
Length: 675
>KH.S966.7.v1.A.nonSL5-1
LVLIMLLVRLTNYNKLNIFKRTFGPIRCLAGFSGSGSSHQNPSSVKKSSMLSVGLLNKQC
VRRQMPGPSSVVGGGASVELGSKKLLKFMSSYIWPKDNSLVRRRVVLSLSLLVSAKLLNV
QVPFLFKYAVDALSEVGLNTSTTSAAVFSSVFCLILAYGGARMTTALFNELRDAVFARVA
QRSIRNIARQLFAHLHNLDLKFHLSRQTGAVSKAVDRGTRGINFLFRALVFNIVPTIFEV
SLVSSILWYKCGGQFAFVTLATIASYATWTLGVTAWRTKYRIQMNKSDNQMGNLAVDSLL
NYETVKYFNNENFEVQRYDKCLANYEEANIKTNMSLALLNFGQQFIFSAGLTAIMFLAAQ
GIQTGSLTVGDLVMVNGLLFQLSVPLNFLGSVYRDIKQSLIDMQSMFSLMEQKVSITNLP
QAPMIDLQPNDVSIKFENVSFGYTGDKLILNDLNFAVEPGQSIGIVGGSGSGKSTIVRLL
YRFYDPASGRILIGDNDIKQVNLESMRQHIGIVPQDTVLFHDTIYHNISYGNLKASEAEI
IEAAKMADVHHSILNMPHGYKTHVGERGLKLSGGEKQRIAIARAILKNPTLVVYDEATSS
LDSITEENILSAIRRVTQTKTAIFIAHRLSTVMACDEIYVLAEGKVSERGTHQQLLGDKN
SLYYELWKSQNKIVG
Nucleotide sequence
Length: 2,134
>KH2012:KH.S966.7.v1.A.nonSL5-1
GTGTTTATCCTCAGATTCGTAGTTAGTTTTAATCATGCTGCTGGTTAGGTTGACAAATTA
CAATAAGTTAAATATATTCAAACGAACGTTTGGTCCAATAAGATGCTTGGCTGGTTTCAG
CGGGAGTGGAAGTTCTCATCAAAATCCATCTAGCGTTAAAAAGTCTTCCATGCTATCTGT
TGGTTTGTTGAATAAACAATGTGTCCGACGGCAGATGCCGGGTCCCAGCTCAGTGGTGGG
TGGGGGGGCCTCCGTGGAATTGGGGTCAAAGAAATTGTTAAAGTTTATGTCGTCCTACAT
CTGGCCCAAAGATAATTCCTTAGTTCGAAGACGAGTTGTTTTGTCACTATCATTGTTGGT
GAGCGCAAAACTATTAAACGTCCAAGTTCCGTTCCTGTTCAAGTACGCGGTGGATGCGTT
AAGTGAAGTTGGATTGAACACAAGCACCACGAGCGCTGCCGTGTTTTCATCTGTGTTTTG
CCTCATACTCGCATATGGGGGTGCCAGGATGACGACAGCTTTGTTTAACGAATTGCGTGA
TGCAGTATTTGCGAGGGTCGCGCAACGGTCGATACGAAATATTGCCCGCCAATTATTCGC
TCACCTTCACAACCTTGACCTTAAGTTTCATCTTAGCCGACAAACTGGGGCCGTATCGAA
AGCAGTGGACCGTGGAACTCGGGGAATCAACTTCCTTTTTCGTGCGCTTGTGTTTAACAT
CGTACCAACCATATTTGAGGTCTCGTTGGTTAGTTCGATCCTTTGGTATAAATGTGGAGG
TCAGTTTGCATTTGTTACCCTGGCAACCATAGCGAGCTATGCAACATGGACACTTGGTGT
TACAGCGTGGAGGACAAAATATCGAATTCAAATGAACAAATCCGACAACCAGATGGGGAA
CTTGGCTGTGGATTCGCTGCTAAATTATGAAACCGTGAAATATTTTAACAACGAAAATTT
TGAAGTGCAAAGATACGACAAATGTTTAGCAAATTATGAAGAAGCAAATATTAAAACCAA
CATGTCGCTTGCGTTGTTAAACTTTGGACAACAATTCATATTTAGCGCCGGTTTAACAGC
TATAATGTTTCTTGCCGCTCAAGGTATTCAAACGGGCAGTTTAACAGTTGGTGATCTGGT
GATGGTTAACGGACTTTTGTTTCAACTTTCAGTCCCCTTAAATTTCCTCGGTTCGGTTTA
TCGTGACATCAAGCAATCATTGATTGACATGCAATCCATGTTCAGTTTGATGGAACAAAA
AGTTTCCATCACCAACCTTCCACAAGCCCCCATGATTGATCTACAACCCAACGATGTTTC
AATCAAGTTTGAAAACGTTTCCTTTGGTTACACGGGCGACAAACTAATTCTTAACGACCT
TAATTTCGCTGTCGAGCCCGGACAAAGTATTGGCATTGTGGGTGGAAGCGGCAGTGGGAA
ATCGACAATCGTCAGGTTGTTATATCGTTTCTATGATCCTGCATCAGGTCGAATATTAAT
CGGTGACAACGATATTAAACAAGTCAACCTTGAAAGTATGCGGCAACATATTGGTATTGT
ACCACAAGATACCGTGTTATTTCATGATACAATTTATCATAATATATCATACGGAAACCT
TAAAGCAAGTGAAGCCGAGATAATTGAAGCAGCCAAGATGGCCGACGTCCATCATTCAAT
CCTCAACATGCCCCATGGTTACAAGACCCATGTGGGTGAACGGGGGTTGAAACTTTCAGG
GGGTGAAAAACAACGGATCGCGATCGCTCGAGCGATTCTTAAGAACCCGACGCTGGTTGT
TTACGATGAAGCGACTTCGTCATTAGACTCGATCACAGAAGAAAACATCCTGAGTGCGAT
CAGGCGCGTCACACAAACCAAAACGGCGATATTTATCGCGCATAGATTGTCCACGGTCAT
GGCTTGCGACGAGATTTATGTTTTGGCCGAGGGGAAAGTATCAGAGCGTGGAACGCATCA
ACAATTATTGGGCGATAAAAACTCATTGTATTACGAACTATGGAAAAGTCAAAACAAAAT
TGTCGGTTAAAGTTGTTTTTAAAGTTTTATGCAGTTCATCTATGCATGATTTTATAATGA
TTGTAAAAATAAATAGTTAACTTAACATTGATAG
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[84-411] 1.96E-55 |
| Gene3D |
ABC1_TM_sf (IPR036640) - T[92-421] 8.9E-134 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[106-398] 40.563 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[106-385] 8.8E-36 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[425-670] 1.96E-87 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[434-668] 23.463 |
| Pfam |
ABC_transporter-like (IPR003439) - T[450-599] 1.8E-34 |
| SMART |
AAA+_ATPase (IPR003593) - T[459-644] 3.3E-15 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[571-585] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCB5_HUMAN | 31.157 % | 235 | 6.52E-66 |
| ABCB6_HUMAN | 42.007 % | 463 | 7.36E-153 |
| ABCB7_HUMAN | 57.596 % | 731 | 0 |