- Transcript 'Moocul.CG.ELv1_2.S11...' >
- Transcript 'KH2012:KH.C2.693.v1....' >
- Transcript 'KH2012:KH.S966.7.v1....'
Transcript Model
Transcript Id
KH2012:KH.S966.7.v1.A.SL7-1
Possible name(s)
ABCB5; ABCB6; ABCB7
Gene model
Location
KhS966 [7,688 / 9,774]
Amino acid sequence
Length: 666
>KH.S966.7.v1.A.SL7-1
LTNYNKLNIFKRTFGPIRCLAGFSGSGSSHQNPSSVKKSSMLSVGLLNKQCVRRQMPGPS
SVVGGGASVELGSKKLLKFMSSYIWPKDNSLVRRRVVLSLSLLVSAKLLNVQVPFLFKYA
VDALSEVGLNTSTTSAAVFSSVFCLILAYGGARMTTALFNELRDAVFARVAQRSIRNIAR
QLFAHLHNLDLKFHLSRQTGAVSKAVDRGTRGINFLFRALVFNIVPTIFEVSLVSSILWY
KCGGQFAFVTLATIASYATWTLGVTAWRTKYRIQMNKSDNQMGNLAVDSLLNYETVKYFN
NENFEVQRYDKCLANYEEANIKTNMSLALLNFGQQFIFSAGLTAIMFLAAQGIQTGSLTV
GDLVMVNGLLFQLSVPLNFLGSVYRDIKQSLIDMQSMFSLMEQKVSITNLPQAPMIDLQP
NDVSIKFENVSFGYTGDKLILNDLNFAVEPGQSIGIVGGSGSGKSTIVRLLYRFYDPASG
RILIGDNDIKQVNLESMRQHIGIVPQDTVLFHDTIYHNISYGNLKASEAEIIEAAKMADV
HHSILNMPHGYKTHVGERGLKLSGGEKQRIAIARAILKNPTLVVYDEATSSLDSITEENI
LSAIRRVTQTKTAIFIAHRLSTVMACDEIYVLAEGKVSERGTHQQLLGDKNSLYYELWKS
QNKIVG
Nucleotide sequence
Length: 2,086
>KH2012:KH.S966.7.v1.A.SL7-1
GTTGACAAATTACAATAAGTTAAATATATTCAAACGAACGTTTGGTCCAATAAGATGCTT
GGCTGGTTTCAGCGGGAGTGGAAGTTCTCATCAAAATCCATCTAGCGTTAAAAAGTCTTC
CATGCTATCTGTTGGTTTGTTGAATAAACAATGTGTCCGACGGCAGATGCCGGGTCCCAG
CTCAGTGGTGGGTGGGGGGGCCTCCGTGGAATTGGGGTCAAAGAAATTGTTAAAGTTTAT
GTCGTCCTACATCTGGCCCAAAGATAATTCCTTAGTTCGAAGACGAGTTGTTTTGTCACT
ATCATTGTTGGTGAGCGCAAAACTATTAAACGTCCAAGTTCCGTTCCTGTTCAAGTACGC
GGTGGATGCGTTAAGTGAAGTTGGATTGAACACAAGCACCACGAGCGCTGCCGTGTTTTC
ATCTGTGTTTTGCCTCATACTCGCATATGGGGGTGCCAGGATGACGACAGCTTTGTTTAA
CGAATTGCGTGATGCAGTATTTGCGAGGGTCGCGCAACGGTCGATACGAAATATTGCCCG
CCAATTATTCGCTCACCTTCACAACCTTGACCTTAAGTTTCATCTTAGCCGACAAACTGG
GGCCGTATCGAAAGCAGTGGACCGTGGAACTCGGGGAATCAACTTCCTTTTTCGTGCGCT
TGTGTTTAACATCGTACCAACCATATTTGAGGTCTCGTTGGTTAGTTCGATCCTTTGGTA
TAAATGTGGAGGTCAGTTTGCATTTGTTACCCTGGCAACCATAGCGAGCTATGCAACATG
GACACTTGGTGTTACAGCGTGGAGGACAAAATATCGAATTCAAATGAACAAATCCGACAA
CCAGATGGGGAACTTGGCTGTGGATTCGCTGCTAAATTATGAAACCGTGAAATATTTTAA
CAACGAAAATTTTGAAGTGCAAAGATACGACAAATGTTTAGCAAATTATGAAGAAGCAAA
TATTAAAACCAACATGTCGCTTGCGTTGTTAAACTTTGGACAACAATTCATATTTAGCGC
CGGTTTAACAGCTATAATGTTTCTTGCCGCTCAAGGTATTCAAACGGGCAGTTTAACAGT
TGGTGATCTGGTGATGGTTAACGGACTTTTGTTTCAACTTTCAGTCCCCTTAAATTTCCT
CGGTTCGGTTTATCGTGACATCAAGCAATCATTGATTGACATGCAATCCATGTTCAGTTT
GATGGAACAAAAAGTTTCCATCACCAACCTTCCACAAGCCCCCATGATTGATCTACAACC
CAACGATGTTTCAATCAAGTTTGAAAACGTTTCCTTTGGTTACACGGGCGACAAACTAAT
TCTTAACGACCTTAATTTCGCTGTCGAGCCCGGACAAAGTATTGGCATTGTGGGTGGAAG
CGGCAGTGGGAAATCGACAATCGTCAGGTTGTTATATCGTTTCTATGATCCTGCATCAGG
TCGAATATTAATCGGTGACAACGATATTAAACAAGTCAACCTTGAAAGTATGCGGCAACA
TATTGGTATTGTACCACAAGATACCGTGTTATTTCATGATACAATTTATCATAATATATC
ATACGGAAACCTTAAAGCAAGTGAAGCCGAGATAATTGAAGCAGCCAAGATGGCCGACGT
CCATCATTCAATCCTCAACATGCCCCATGGTTACAAGACCCATGTGGGTGAACGGGGGTT
GAAACTTTCAGGGGGTGAAAAACAACGGATCGCGATCGCTCGAGCGATTCTTAAGAACCC
GACGCTGGTTGTTTACGATGAAGCGACTTCGTCATTAGACTCGATCACAGAAGAAAACAT
CCTGAGTGCGATCAGGCGCGTCACACAAACCAAAACGGCGATATTTATCGCGCATAGATT
GTCCACGGTCATGGCTTGCGACGAGATTTATGTTTTGGCCGAGGGGAAAGTATCAGAGCG
TGGAACGCATCAACAATTATTGGGCGATAAAAACTCATTGTATTACGAACTATGGAAAAG
TCAAAACAAAATTGTCGGTTAAAGTTGTTTTTAAAGTTTTATGCAGTTCATCTATGCATG
ATTTTATAATGATTGTAAAAATAAATAGTTAACTTAACATTGATAG
| SUPERFAMILY |
ABC1_TM_sf (IPR036640) - T[75-402] 1.96E-55 |
| Gene3D |
ABC1_TM_sf (IPR036640) - T[83-412] 8.6E-134 |
| ProSiteProfiles |
ABC1_TM_dom (IPR011527) - T[97-389] 40.563 |
| Pfam |
ABC1_TM_dom (IPR011527) - T[97-376] 8.6E-36 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[416-661] 1.96E-87 |
| ProSiteProfiles |
ABC_transporter-like (IPR003439) - T[425-659] 23.463 |
| Pfam |
ABC_transporter-like (IPR003439) - T[441-590] 1.7E-34 |
| SMART |
AAA+_ATPase (IPR003593) - T[450-635] 3.3E-15 |
| ProSitePatterns |
ABC_transporter_CS (IPR017871) - T[562-576] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ABCB5_HUMAN | 31.157 % | 235 | 6.31E-66 |
| ABCB6_HUMAN | 42.007 % | 463 | 5.63E-153 |
| ABCB7_HUMAN | 57.596 % | 731 | 0 |