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TRANSCRIPT CARD

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  1. Transcript 'NCBI:KH.XM_018817162...'

Transcript Model

Transcript Id

NCBI:KH.XM_018817162.1

Possible name(s)

CARF

Location

KhC2 [6,571,997 / 6,577,564]

Sequences

Amino acid sequence

Length: 559

>KH.XP_018672707.1
MNCTACLSIREILTFPHYKVKTEEKWKKQKTSQHLKTVGFSSVKNSVSCFIVLFPSIHDH
SGHPVEEAAGIQQRVDSRVIDKVGELIDDRVCSIMKIQRHLRIFVVHELFKNTLPPASSN
RRFFPTKKDITNPYYNAYTKRKMSKIDQANVQLLVDEWCHKLPEDNILFRPYIAGIRSKQ
LIEDIDGDDITAVDAKQTLLFVYQTAWQSRLLLRYGQDIYLLDATYKTSKYALPLFFLCV
KTNVNYQVVACFVLQNECQSDIQEALVILKSWTPGWNPKFFMTDKCEAEINAVESSFQDC
KVLLCDFHREQAWERWVKKTDNGVGDRKKAVLSGLRAVAKAENMVELKSAVDSLTNSEAY
TQNAKLQTYFQSAWLPQKERWVSLYRLGKMRVPIGTNNGVERQNKMLKECHLKFQVDKSL
SGLLKVLHYDFFPEALKKYTNENTLASGSYRLYKVVTPSYLHNRPQHVVHHCMKRICNAL
AISSNDIVRVDTSSFTVRSSCGILMYDVYLGNESDFPKCTCPDFKYYFLPCKHMFAIFSK
YNDVSWASLPTWYTDSVEN

Nucleotide sequence

Length: 2,657

>NCBI:KH.XM_018817162.1
GAGGGTATGTGTTGTGCAAAAGTTAACATTTTACTTGTGTGGGGTACGTGTTGTGCAAAA
GTTAACATTTTACTTGTGTGGGGGTACGTGTTGTGCAAAAGTTAACATTTTACTTGTGTG
GGGGTACGTGTTGTGCAAATATGATCATTTTACTTGTGTGTGGGTACGTGTTGTGCCAAA
ATAATCATTTTACTTGTGTGGGGGTACGTGTTGTGCAAATATGATCATTTTACTTGTGTG
TGGGTACGTGTTGTGCCAAAATAATCATTTTACTTGTGTGAGGGTACGTGTTGTGCAAAT
ATGATCATTTTACTTGTGTGAGGATATGTGTTGTGCAAAAATTAACATTTTACTTGTGTG
GGGTTATGTGTTGTGCAAAAATTAACATTTTACTTGTGTGGGGGTACGTGTTGTGCAAAA
GTTAACAATCTACTGTTTATGTGTTGTGCAAAAGTTAACAATCTACTGTTGAGAACTCGT
ACGAACTTATATTTGTTTCTCTTTTAGTAAAAGCGAAATAGTTATTTTATAACTGATATA
CATTTACTTTGCAAAACAAGAATTGTTCAACCCATGACTCATTTTCTGAAAATGGAAGGT
AAAGATACTTCTTTATCAACTCAATTTCTAAAGAACCAAACTGTGGTGGAAACAACATCA
GATAAAAACAAAGCTGGTCAAATCGTTAAGTTTAACACTTTGCAAGAAGCTACAACAGCT
ATTCAAAATGTTGAAACGGACACCTTGACCAAATTTATTTTCTTGAGAAGAAAAAAAAAT
GATTTAAGAAAAAGTAAAGTTCAATGGGATGCACAAGAAAACATCCCATTTGTTGTTAAA
TCGTTCACAAAATACGAATGTCAACATGGCAAAGATAGAAATAAAACAAAGAATTTAAAA
CGACAAAACCAGTTTAAGGGTCCAGCTGACCACATGTACGGGAAAAAAAATACCTTTGCG
TGCAAGGATCAAAGAAAATGAATTGCACTGCATGTTTAAGTATTCGGGAGATTCTTACTT
TCCCACATTATAAGGTTAAAACAGAAGAAAAATGGAAAAAACAGAAAACATCACAACATT
TGAAGACAGTCGGTTTTTCATCTGTAAAAAACAGTGTTAGTTGTTTTATTGTACTGTTTC
CCTCTATCCATGATCACAGTGGACATCCTGTTGAAGAGGCTGCAGGCATCCAACAACGAG
TGGATAGCAGAGTGATTGACAAAGTCGGAGAACTAATCGATGACCGTGTTTGCTCCATCA
TGAAAATACAACGTCATTTAAGAATATTTGTTGTTCATGAACTTTTCAAGAATACATTGC
CTCCAGCATCAAGTAACAGAAGATTTTTTCCGACAAAAAAAGACATTACCAATCCCTATT
ATAATGCATACACAAAACGAAAAATGTCGAAAATTGACCAAGCAAATGTGCAATTACTGG
TAGATGAGTGGTGCCACAAGTTACCTGAAGATAACATTCTCTTCAGACCCTATATTGCCG
GTATTCGTTCCAAACAATTAATTGAAGACATTGATGGGGATGATATCACTGCAGTGGATG
CCAAACAAACATTACTGTTTGTATACCAGACAGCTTGGCAAAGTAGACTCCTACTACGTT
ATGGTCAGGATATCTACCTCCTGGATGCAACTTATAAGACATCAAAGTATGCACTGCCAC
TGTTCTTTCTTTGTGTAAAGACCAATGTCAACTATCAAGTTGTTGCATGTTTTGTGCTCC
AAAACGAATGTCAATCAGACATTCAGGAAGCTCTTGTAATTCTAAAGTCTTGGACACCTG
GCTGGAACCCAAAGTTTTTCATGACTGACAAATGTGAAGCTGAAATAAATGCTGTTGAAA
GTAGTTTTCAAGATTGTAAAGTGCTTCTATGTGACTTCCATCGTGAACAAGCATGGGAAA
GATGGGTCAAGAAAACAGATAATGGTGTTGGAGACAGAAAAAAGGCAGTTTTATCTGGGT
TGAGAGCAGTGGCGAAGGCAGAAAATATGGTTGAGCTCAAAAGTGCTGTAGATTCCCTTA
CAAACAGTGAAGCTTATACACAAAATGCAAAGCTACAAACCTACTTTCAAAGTGCATGGT
TGCCACAGAAGGAGAGATGGGTTTCACTTTACCGATTGGGGAAGATGCGTGTGCCAATTG
GTACGAACAACGGGGTGGAGAGACAAAACAAAATGCTCAAGGAATGTCACTTGAAGTTTC
AAGTTGACAAATCTTTATCTGGGCTTTTAAAAGTGCTTCACTATGACTTTTTTCCAGAGG
CCTTAAAAAAATATACAAACGAAAACACCCTGGCTTCAGGTTCATACAGGCTGTACAAAG
TTGTGACCCCATCATATCTACACAATCGGCCGCAACATGTTGTTCATCATTGCATGAAAA
GAATATGCAACGCTTTGGCAATATCCTCTAATGATATTGTTCGAGTTGACACATCTTCAT
TTACTGTGCGGAGCAGTTGTGGTATACTAATGTATGATGTTTATTTGGGAAATGAGTCTG
ACTTTCCCAAGTGCACTTGCCCAGATTTTAAATATTATTTCCTTCCTTGCAAACACATGT
TTGCTATATTCAGTAAGTATAATGATGTTTCATGGGCATCCTTACCAACATGGTATACTG
ACTCTGTTGAAAATTAA

InterProScan

Pfam
CaRF (IPR029309) - T[1-134] 2.2E-29
Pfam
MULE_transposase_dom (IPR018289) - T[220-311] 8.5E-18
ProSiteProfiles
Znf_SWIM (IPR007527) - T[506-542] 11.053
Pfam
Znf_SWIM (IPR007527) - T[506-542] 2.6E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value