- Transcript 'NCBI:KH.XM_018815899...'
Transcript Model
Transcript Id
NCBI:KH.XM_018815899.1
Possible name(s)
CELSR3; NOTCH1; SNED1
Gene model
Location
KhL35 [62,112 / 67,763]
Amino acid sequence
Length: 568
>KH.XP_018671444.1
MFMKYLIINFFQLLPLGSNPTVTPSRNTWALDYTGQLCSNLGTNPCQPTTPVPGYNATCQ
YFFLKKKKNGVSCYTTTFSVTNKLTSSFNQSQLELAHGGSSCFAQNISLQECSSPTPNNV
PVNPSSGVYNTQANFQCSHGSTLFYLNGTAGNTATKCLATAEWENEKIVQCLTVSYNGIE
LKFYAIRKTYEQAKTACESDNAQLVVVKSQAMQDIITPHLDSTISYIAWGQYDYSVGYWM
GLRKLAGANIHDYKALDGTTYVNKPAYTNWNNVEPNALKSQLACAYMCPYNTVYGINRAY
NRLSDNALFDVSKGGWWTNFCTLYNYYICQRAFCATNPCIHGSCVALATSYKCNCDPGYS
GSLCDDDLCFPQPCQNGGSCNRVPGNYTCSCLNGFVGRNCETGQPTPTTPTTGGTPPTIP
DNLGVIFGAVLGVVGALILIIILVYHFFIRPNKKDVTVAMLNPEIPGSFKLPRYVDITLP
QEVSYENLKEENIDPSSTNYENMRNNVSVNRDEEGYVELKQLDPCGQVVTSSENGGYETA
IVRVNEEPEYVSIAQLPQPLYEPINPLP
Nucleotide sequence
Length: 1,707
>NCBI:KH.XM_018815899.1
ATGTTTATGAAGTATTTAATTATAAACTTCTTCCAGCTTCTCCCACTTGGTTCCAACCCA
ACAGTCACCCCATCAAGAAATACATGGGCACTTGATTATACTGGGCAGTTGTGCTCAAAC
CTTGGCACAAACCCATGCCAACCAACCACCCCTGTACCAGGTTACAATGCAACTTGCCAA
TATTTTTTTTTAAAAAAAAAAAAAAATGGGGTAAGTTGCTACACAACAACGTTCAGTGTT
ACCAACAAATTAACTTCTTCTTTCAATCAATCACAGTTGGAGCTAGCTCATGGTGGTTCA
AGTTGCTTTGCTCAGAATATTTCACTTCAAGAATGTTCATCTCCAACACCCAACAATGTT
CCAGTCAACCCATCAAGTGGTGTCTACAACACTCAAGCTAACTTCCAGTGTTCCCATGGT
TCAACTTTATTTTATTTAAATGGAACAGCTGGAAACACTGCAACCAAATGCCTTGCTACA
GCAGAGTGGGAGAATGAAAAGATAGTTCAATGTTTGACTGTGTCATACAACGGGATTGAG
CTGAAATTTTACGCTATTCGAAAAACATACGAGCAAGCCAAGACTGCTTGTGAGTCCGAC
AACGCCCAGCTAGTAGTGGTGAAGAGTCAAGCAATGCAAGATATCATCACTCCACACCTC
GATTCCACGATTAGTTACATTGCATGGGGACAATATGATTACAGTGTTGGTTATTGGATG
GGGCTCAGGAAATTAGCAGGTGCAAATATACACGACTACAAAGCTCTTGATGGTACCACC
TACGTCAACAAGCCCGCATATACAAACTGGAACAATGTGGAACCGAACGCTCTGAAGTCT
CAATTAGCTTGTGCGTATATGTGTCCCTACAATACTGTGTATGGGATAAATAGAGCGTAT
AATCGGTTGAGCGACAATGCGTTATTTGATGTTAGTAAAGGTGGCTGGTGGACCAATTTC
TGCACCCTGTACAATTACTATATTTGTCAAAGAGCCTTCTGCGCAACGAACCCTTGTATA
CATGGATCGTGTGTTGCTTTGGCGACAAGCTACAAATGTAATTGCGATCCTGGTTACTCT
GGATCTCTGTGTGACGATGATCTATGCTTCCCCCAGCCTTGTCAGAACGGTGGGAGTTGT
AACAGAGTTCCCGGCAACTACACTTGTTCATGCTTGAATGGCTTTGTTGGAAGGAATTGT
GAAACAGGACAACCAACACCAACAACTCCCACAACTGGTGGTACTCCACCAACCATCCCC
GATAACTTGGGTGTTATATTCGGAGCTGTGTTAGGTGTAGTGGGAGCTCTTATATTGATC
ATCATTCTTGTTTATCATTTTTTTATCAGACCAAACAAGAAAGATGTAACTGTTGCTATG
CTCAATCCCGAAATACCTGGATCTTTCAAACTACCACGTTATGTTGATATCACCCTTCCA
CAAGAAGTGTCATACGAAAACTTAAAAGAAGAAAATATTGATCCAAGCTCAACAAATTAT
GAAAACATGAGAAACAACGTATCAGTTAATCGAGATGAAGAAGGTTATGTTGAACTAAAG
CAACTGGATCCTTGTGGACAGGTTGTAACCAGTAGTGAGAATGGTGGGTATGAAACAGCC
ATTGTTAGAGTGAACGAGGAACCAGAATACGTGAGCATTGCCCAACTTCCACAACCACTG
TATGAGCCTATTAATCCACTGCCCTGA
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[110-173] 8.261 |
| SMART |
C-type_lectin-like (IPR001304) - T[171-330] 2.0E-13 |
| Gene3D |
C-type_lectin-like/link_sf (IPR016186) - T[174-332] 2.2E-18 |
| SUPERFAMILY |
CTDL_fold (IPR016187) - T[174-332] 1.1E-17 |
| ProSiteProfiles |
C-type_lectin-like (IPR001304) - T[176-330] 12.442 |
| Pfam |
C-type_lectin-like (IPR001304) - T[187-331] 3.2E-12 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[330-362] 8.878 - T[365-401] 20.514 |
| SMART |
EGF-like_dom (IPR000742) - T[333-365] 6.0E-6 - T[368-401] 5.2E-5 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[334-365] 0.028 - T[367-401] 0.0013 |
| Pfam |
EGF-like_dom (IPR000742) - T[334-362] 6.2E-7 - T[369-399] 1.7E-6 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[389-400] . - T[389-400] . |
| Protein Name | Identity | Bit Score | e-value |
|---|