- Transcript 'KH2012:KH.L61.1.v6.A...' >
- Transcript 'NCBI:KH.XM_018812258...'
Transcript Model
Transcript Id
NCBI:KH.XM_018812258.1
Possible name(s)
ADGRB3; HMCN1; THBS1
Gene model
Location
KhC6 [22,320 / 27,236]
Amino acid sequence
Length: 644
>KH.XP_018667803.1
MCGNMPHCVLYNSTCYAKYIPVQPVSQFDQFLAAYLTSTQLVTSPIVHETDNRNLVLGGL
PFLFPPQQCSVFPHNCAIDLGNIMALLEPPVDVPYCQRIACNPANPSLESDQFGCHSQPG
CYFDLELSTLRRSIGYTVLSTVPICHFVIRNQKFQQLATDYTTSKNASWSSIHTRCFINQ
NNASIMAPPIGCSMLIFMKYYGINMRMLGWTGITANECTLINGCYLEGEGCFYPGNPRSI
EIAAQNDLFKRKIHFPPDVYGQAKCANFDVTYDHGANLDAYHRCKQLGCTVDSLVYIEES
VQFDLMHMMVRSVAPHIQQRFWDLVHSGNISAHNWKSSLRKLSTCLGEQNQYNVQSNRPS
DLGLLKVKLSLRPSWYLMYSIPGYTASQRTLPLCPYRNYNFGIVSLKGSFTACCETYACY
TPKRHIRTSYSGIANYWSAWSEYGICSVSCGGGIQSRIRRCVRFRGKQCNLTGERNNHKA
CNTHSCPLFSHWNIWASCSVACGGGTQTRTRLCLPEGSTCSDDAQGGASQSRPCQTGNCA
TVSDWSEFSECDVHCGHGIATSTRTCSSQGAYGCPVLTRTRRCEIFCGVVHKENGPCLPY
PSCTREIRKRCVYAHGPGHCSGMHNETERCYLGRMCFLCVFGNC
Nucleotide sequence
Length: 2,015
>NCBI:KH.XM_018812258.1
TTTGTGAACCCGTGTAACCGTGCAAGTCTGGAAGTAGCATTGTCAATGTGCGGGAACATG
CCACATTGCGTGTTATATAACAGCACCTGCTATGCTAAGTATATTCCTGTACAGCCAGTC
TCTCAATTCGATCAGTTTCTTGCCGCTTATCTGACTTCTACACAACTAGTTACGTCACCA
ATCGTTCACGAAACCGATAATCGTAACTTAGTTTTAGGTGGACTTCCATTTTTGTTCCCA
CCTCAACAATGCTCTGTATTTCCACACAACTGTGCAATCGATCTAGGTAACATCATGGCT
TTACTAGAACCACCAGTGGACGTGCCTTACTGCCAAAGAATCGCATGTAATCCTGCGAAC
CCATCACTTGAATCAGATCAATTTGGTTGTCATTCTCAACCCGGCTGCTACTTTGACCTT
GAGCTTTCCACTTTAAGACGAAGTATTGGTTACACCGTATTATCGACTGTCCCCATATGC
CACTTCGTCATAAGAAACCAGAAATTTCAGCAACTTGCAACTGACTATACTACATCTAAA
AACGCCTCGTGGTCAAGCATTCACACACGGTGCTTTATAAACCAAAACAACGCTTCAATC
ATGGCGCCACCAATCGGATGTTCCATGCTTATTTTTATGAAGTATTATGGAATCAATATG
CGTATGTTAGGTTGGACAGGCATTACTGCGAACGAATGTACCCTTATTAACGGTTGCTAT
TTAGAAGGCGAAGGCTGTTTTTACCCAGGAAATCCGCGGAGCATTGAAATAGCTGCACAA
AACGATTTGTTCAAGCGAAAAATTCATTTTCCTCCCGATGTTTATGGACAAGCAAAATGC
GCAAACTTTGACGTAACTTATGATCACGGGGCTAATCTTGACGCCTACCACCGATGTAAA
CAATTAGGGTGTACGGTGGATTCGTTAGTTTACATCGAAGAGTCTGTACAGTTCGATCTT
ATGCATATGATGGTGCGATCTGTTGCTCCACATATTCAACAACGGTTTTGGGACTTAGTA
CATAGCGGTAACATTTCTGCGCACAACTGGAAGAGCTCGTTACGGAAATTAAGCACCTGT
CTAGGAGAACAAAACCAGTATAATGTTCAAAGCAACAGGCCCAGCGACTTGGGACTTTTG
AAGGTTAAATTATCCTTGAGACCAAGTTGGTATCTAATGTATTCAATACCTGGTTACACT
GCTAGTCAACGAACGCTACCACTTTGCCCGTATCGTAATTATAACTTTGGGATCGTTTCT
CTTAAAGGGTCATTTACAGCTTGCTGCGAGACATATGCCTGCTACACCCCTAAACGTCAT
ATACGTACATCTTACTCTGGGATAGCGAACTATTGGTCTGCTTGGTCGGAGTATGGAATA
TGCTCTGTTTCTTGTGGGGGCGGAATACAAAGCCGTATACGTCGGTGCGTACGGTTCCGG
GGCAAGCAATGCAACTTAACTGGCGAAAGAAACAATCATAAAGCGTGTAATACGCATTCG
TGTCCATTATTTAGCCATTGGAATATTTGGGCTTCGTGTTCTGTTGCTTGCGGAGGTGGA
ACGCAAACCAGAACCCGTCTTTGCTTACCTGAAGGTAGCACCTGTTCAGATGACGCTCAA
GGCGGAGCTTCTCAATCAAGACCTTGCCAAACTGGCAACTGCGCAACTGTTAGCGATTGG
AGTGAATTTAGCGAGTGTGACGTGCATTGTGGACACGGTATAGCTACAAGCACAAGAACA
TGTTCAAGCCAAGGTGCATACGGATGCCCTGTACTTACGCGGACACGGCGCTGTGAAATA
TTTTGCGGGGTAGTGCACAAAGAAAATGGGCCATGTCTGCCCTATCCGTCGTGCACACGT
GAAATTCGCAAGCGGTGTGTGTATGCACATGGCCCAGGACACTGCTCAGGCATGCATAAT
GAAACTGAACGATGTTACCTCGGAAGAATGTGTTTTCTATGTGTTTTTGGTAACTGTTGA
AATCGAATTTTACAATAAAATGAAAACTGTTATAT
| ProSiteProfiles |
TSP1_rpt (IPR000884) - T[434-487] 11.782 - T[489-540] 9.905 - T[542-588] 8.479 |
| SUPERFAMILY |
TSP1_rpt_sf (IPR036383) - T[435-486] 2.49E-10 - T[489-539] 6.28E-8 - T[539-583] 4.58E-6 |
| Gene3D |
TSP1_rpt_sf (IPR036383) - T[435-487] 2.0E-12 - T[488-539] 1.6E-8 - T[540-583] 5.5E-7 |
| SMART |
TSP1_rpt (IPR000884) - T[437-487] 1.7E-10 - T[489-540] 9.4E-9 - T[542-588] 2.4E-4 |
| Pfam |
TSP1_rpt (IPR000884) - T[438-486] 2.8E-9 - T[490-539] 6.7E-7 - T[543-583] 8.2E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HMCN1_HUMAN | 39.103 % | 83.6 | 2.16E-16 |