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- Transcript 'NCBI:KH.XM_018811872...'
Transcript Model
Transcript Id
NCBI:KH.XM_018811872.1
Possible name(s)
LRP1; LRP1B; LRP6
Gene model
Location
KhC5 [4,572,903 / 4,581,564]
Amino acid sequence
Length: 1,033
>KH.XP_018667417.1
MKQLLRITAFTSLAVLVLAQSNQTSECVNGPSFWYRGHRTYTHTGKTCVRWDVNQRYIPG
DGAHHNYCRNPTSNVFGTWCYVSTRSRTWEFCNITKCPDDALVLLTTYNTVTRRSEIYQL
PADPEIHAQQYPTQKNFTIEVMYSSPRQNSEYTALATDPVGQRVFIGDERSDLVEVYYVR
ENRSKTHYEGMGRGIEHMAYDWQNQNLYWTDSVMKCIMVSEVTNFTHYSIVYQSASTPAG
IAVHVLKRLLFFSLYKARVTHIVSSDMAGKNSKVLSRYTGPWRITGLTVDYASERLYWCI
IHNSDDRSYVYSGNLNGTNILWRYRVNEKARFWGIAIYLNYIYTTDTYTHHIQNRVRHRM
WYAAKVGTYLGSRRYNTPKPKGIGIYDTHAEYLNATPNTTFGSCEGMPKCHHICLPKINA
TRECACSLGFHRINDTHCVQKPLIGTDALLMVDYGQGKIFQLPINQSGSYNFSIVDIGTQ
TNAYAMDIDMETDTLYWFDRKRSSIFKTSLQSTSNSQTIVANVTASTMAVDQLTVMKVPK
LRENISDISSMAHDARNGFLYWTDINGGHGYGQLWRMRNDGSEKRALLNQLNWPHGVTIS
YERNSLFYSESWSGQIIEYSMASLESMNPNHRSVYSHLGLSGWNGHYFNSMTVLGDWLYY
YDRWLHYIQRYNLRTRRHATRFGPAKFFKGRDMTKYSKDYYNRHISTLRNPCGRNSTNEC
PEFCFNENTRRVCKCKDGSGFLTPTVCVDNFNHTSNPPVPLRGCPLDTDRRLGPCQNTVS
FSWTSIEWVDDNTPTSRLRTTQPSQPSPVNLPNGTHEFVFTATDESNNTGICRFTVNVYI
AWCDVSRFDNIAPANLVRTDLNCDGRPYFNVSCRSPDQNVAIGGNYGSPSMMVACMFNMW
IPGNLRLIRCHSSPEVVTISQELYTPPVSSPTTPSQTTIATTNTSDSKQRAIMSSSNNIQ
KQGKLSSQSKPTGLGRGAIAGIIIAAVLLFIAIIIGVIFLMRKQTHASPVAQIAWKQLNP
EAVDECRYDSQSA
Nucleotide sequence
Length: 3,462
>NCBI:KH.XM_018811872.1
TTAACACTCTTTTATACGAAACAGTCTACTACAGCGCAGTTGTTGCGATTTTAACTCTTT
TGAATGCAGAAAAAGATTGAGTACATCTGTGGAAGTTACAATAGAAACATCGTGACCGGA
AATAATTTGCAATGCCCAATGTATGGTCGGGATGAAAACCAGACATTACACATCGATGAA
TAACGTGTGCAGGACTTAAAAGCAGTCGACAAGCGTAATGTCGTAATTAAGCAATATAAA
AAAGTGAATGGATTGAGTGTAGACAGTGTATAAATAAGGTCACAGATACGATTCATTATC
AAAAACAATAATAAAATTACTGAGTATGCGCAATATCCTAATATAGGGTCTACGTGAAAA
ATGAAACAACTGTTAAGAATAACTGCATTTACATCATTGGCTGTTTTAGTTTTGGCTCAA
TCCAATCAAACTTCAGAATGCGTTAATGGGCCAAGCTTTTGGTACCGAGGACATCGGACT
TACACCCACACAGGGAAGACATGCGTAAGGTGGGATGTGAATCAAAGATACATTCCCGGT
GATGGAGCACACCACAACTATTGCAGAAATCCCACTTCCAATGTTTTCGGAACTTGGTGT
TACGTCTCAACCAGATCTAGAACATGGGAGTTTTGCAACATTACTAAATGCCCGGATGAT
GCACTTGTTCTCTTAACAACCTATAACACCGTAACCAGAAGAAGTGAAATTTATCAGTTA
CCAGCAGACCCGGAAATACATGCTCAGCAATACCCAACACAAAAAAACTTTACTATAGAA
GTGATGTACTCGTCCCCTCGACAAAACAGTGAATATACAGCACTGGCAACTGACCCGGTG
GGACAGCGTGTGTTTATTGGTGATGAAAGGTCTGATCTTGTGGAGGTTTATTATGTTCGT
GAAAACCGTTCGAAGACGCACTATGAAGGCATGGGGCGAGGAATAGAACACATGGCGTAT
GACTGGCAGAATCAGAACCTGTACTGGACGGATTCGGTTATGAAGTGTATAATGGTTTCT
GAAGTTACTAACTTCACACATTACTCGATAGTGTACCAATCAGCCAGCACCCCAGCTGGA
ATCGCTGTACATGTTTTAAAAAGGCTGCTGTTCTTTTCCCTTTACAAAGCAAGAGTTACA
CACATCGTTAGTAGTGATATGGCTGGCAAAAATTCTAAAGTATTGTCACGATATACTGGA
CCGTGGCGCATTACAGGACTTACTGTCGACTATGCAAGCGAACGGTTGTACTGGTGTATC
ATTCATAACAGTGATGATAGGAGTTACGTCTATAGTGGCAATTTAAATGGAACCAATATC
TTATGGCGTTACCGGGTCAACGAAAAAGCGCGTTTCTGGGGAATTGCCATATACCTGAAT
TATATTTACACTACCGACACTTATACTCATCACATTCAAAACCGCGTCCGGCATCGTATG
TGGTATGCAGCAAAAGTAGGAACCTATCTCGGGTCAAGAAGGTACAACACACCAAAACCC
AAAGGGATCGGAATATACGACACTCATGCGGAGTATTTAAATGCCACACCGAACACTACA
TTTGGTTCTTGCGAAGGCATGCCAAAATGCCATCACATATGTCTACCAAAGATCAACGCC
ACACGAGAATGTGCGTGTTCTTTAGGCTTCCACCGAATCAATGACACACATTGTGTACAA
AAACCACTTATTGGCACCGATGCGTTACTAATGGTGGACTACGGACAAGGAAAGATATTT
CAATTACCAATCAACCAGTCTGGATCGTATAACTTCAGCATCGTTGATATAGGTACACAG
ACCAACGCATACGCAATGGACATCGATATGGAAACAGACACACTGTATTGGTTTGACCGA
AAAAGATCAAGCATTTTCAAAACTTCATTGCAATCTACATCAAATTCTCAAACCATCGTG
GCTAATGTTACAGCAAGCACTATGGCGGTGGACCAGTTGACTGTTATGAAGGTTCCAAAA
TTGAGAGAAAACATTTCTGATATAAGTTCAATGGCTCACGATGCAAGAAACGGATTCCTG
TATTGGACGGACATAAATGGGGGTCATGGATATGGACAACTATGGCGAATGAGAAATGAT
GGTTCAGAAAAGCGAGCATTGTTAAATCAGTTGAATTGGCCGCATGGTGTAACCATTAGT
TATGAACGAAACAGTTTGTTCTATAGCGAATCCTGGTCAGGCCAAATCATAGAGTATTCC
ATGGCTTCGTTGGAATCTATGAATCCAAATCACCGTAGTGTTTATTCACACTTAGGACTG
TCGGGTTGGAATGGTCACTATTTTAACAGCATGACGGTATTGGGTGACTGGCTTTATTAT
TACGACCGCTGGTTACATTATATCCAGCGATACAATTTGAGAACAAGGAGACATGCCACG
AGGTTTGGTCCGGCTAAGTTTTTCAAAGGACGAGACATGACCAAATATAGCAAGGATTAC
TACAACCGTCATATAAGTACTTTACGTAACCCATGTGGAAGAAATTCAACAAACGAATGT
CCTGAGTTTTGCTTCAATGAAAATACCCGACGAGTTTGCAAATGTAAAGACGGTAGCGGA
TTTCTAACACCAACAGTGTGTGTTGACAATTTTAACCACACAAGTAATCCGCCAGTACCG
TTGCGAGGGTGCCCATTAGACACTGACCGAAGGCTCGGACCTTGTCAAAACACTGTGTCG
TTTAGCTGGACTTCTATTGAATGGGTGGATGACAATACACCTACTTCCCGACTGCGCACA
ACTCAACCAAGCCAACCGTCACCCGTAAACCTCCCAAATGGAACCCACGAGTTCGTATTT
ACTGCTACAGATGAATCAAATAACACGGGAATTTGTCGTTTTACAGTAAACGTCTACATT
GCATGGTGTGACGTTTCACGGTTTGATAACATCGCACCCGCAAATCTGGTTCGGACCGAT
CTGAACTGCGATGGTAGACCCTATTTTAATGTCAGCTGTAGGTCGCCTGATCAAAACGTC
GCTATTGGTGGAAACTATGGTAGTCCGTCGATGATGGTTGCTTGTATGTTTAACATGTGG
ATCCCAGGCAATTTACGACTTATACGATGTCATTCGTCACCTGAAGTTGTAACAATCTCT
CAGGAGTTGTATACACCACCTGTTTCGTCACCAACAACCCCATCACAAACAACAATAGCC
ACAACAAATACTTCAGACTCAAAGCAACGAGCGATTATGTCATCATCAAACAACATACAG
AAGCAAGGTAAGTTGTCAAGCCAATCTAAACCTACAGGTTTAGGCAGGGGCGCAATAGCT
GGGATCATCATTGCGGCGGTCTTATTGTTCATTGCAATAATCATTGGGGTGATATTTTTA
ATGCGAAAACAAACACACGCGTCTCCAGTGGCTCAAATAGCCTGGAAGCAGTTGAATCCT
GAGGCGGTTGATGAATGCCGGTATGATAGTCAATCGGCCTAA
| Gene3D |
Kringle_sf (IPR038178) - T[9-105] 3.5E-20 |
| SUPERFAMILY |
Kringle-like (IPR013806) - T[18-107] 1.93E-21 |
| SMART |
Kringle (IPR000001) - T[25-99] 2.6E-8 |
| ProSiteProfiles |
Kringle (IPR000001) - T[26-97] 15.897 |
| Pfam |
Kringle (IPR000001) - T[27-97] 5.0E-10 |
| ProSitePatterns |
Kringle_CS (IPR018056) - T[67-80] . |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[106-442] 5.5E-42 - T[447-536] 1.4E-6 - T[537-736] 6.1E-24 |
| SMART |
LDLR_classB_rpt (IPR000033) - T[185-227] 0.0036 - T[228-272] 4.7 - T[273-320] 0.89 - T[473-515] 47.0 - T[538-584] 1.2 |
| ProSiteProfiles |
HYR_dom (IPR003410) - T[753-840] 14.999 |
| Pfam |
HYR_dom (IPR003410) - T[763-838] 1.7E-4 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRP1_HUMAN | 25 % | 101 | 2.01E-21 |
| LRP1B_HUMAN | 22.93 % | 115 | 9.33E-26 |
| LRP6_HUMAN | 21.701 % | 107 | 3.0E-23 |