- Transcript 'KH2012:KH.L170.28.v4...' >
- Transcript 'Boleac.CG.SB_v3.S128...' >
- Transcript 'KH2012:KH.L134.4.v3....' >
- Transcript 'Phfumi.CG.MTP2014.S3...' >
- Transcript 'Boschl.CG.Botznik201...'
Transcript Model
Transcript Id
Boschl.CG.Botznik2013.chr10.g25619.01.t
Possible name(s)
AL136295.5; RNF19B; RNF31
Gene model
Location
chr10 [19,574,292 / 19,584,893]
Amino acid sequence
Length: 1,262
>Boschl.CG.Botznik2013.chr10.g25619.01.p
MSGKFRTYGNPSIGPQDSVKQKRYQLTFHGFRCIDSVPASANMGRCVGIYLECQSKILQY
KDVRKSLEAKVRQGQARKDVTRKLVDEMLLYDTPIAGRYDFLDVIRILRDNCLPFNPGLE
ALIRGLSILEKYGKNLLRPEKPPQWRVVRLSNAIFKQEVDNVKGARKILGQLGYTTAVED
GLAYSDTQLIPDVPVVTGVTTDILLLRMELILLAHGEHTQEASFYSYIPAIEIKTVQEKM
GVSTLPAEPPMFQTPLPAETPIFQTPLPAETPMFHTPLPPPPSYHQVVEGARTRGSAFEI
YPHPHAATESSDIHAAGVLEPAHQDIPQDELCDLCGQVPPVVECELCRSVYCEDCNNLWH
GNPKRRNHRDKLISYKPKIKISSMEAVETRPIQPVVPQPPSITTAAPNDDDFLAWMNEKA
VEIINISDENRKRQRLEDCLAELDEKASKYQLVINTLSQPSSNNKENLFHHVTGKLQEIN
DSKEQLRIMCGVADVPVRRPRQSASYQETRPQQPRQTHYSNPSLDNRGSARSNIVLPVNE
GSLIDLDPPPAEPFEPLSHTSPGDNQILLAEQTTSLKRNIDEEQSVSYQPAKVQRNGETA
PQSARISDEFGNMTIFEGTGNFDDELSASLKNRSEARSREFISNLPKDELQRKIRQEGVR
YQTTQFLDHVRAGDVSSFRPEQVEVALRELDKTNSSNLATPNSWLERNWTDQVRDFIRLA
KEKGFRINPEDAEDILIEADNVFEKALELVVMAQNEQIADVAGEFGFETAKKALTKHKGD
KYLAVASMQKDKLVEFLGEFRESNNASEHESSDLATALEIEDDVRRRNAITALLQIPDGM
YSDSLNHLIRVMPERLRDTLLEDAVEAIVDNEMVHDVDAAVRHLDNECAICMDRYPRSKL
SCLPTCGENGCAYCLSCLQQHLALCVSERNVRDIVCPMCSNPDIGGVDEDTKTHFFNHID
AILRNMPDGRRVHGIYQDKMRDYTLMRMPNFRWCSHCSGGFQFDGADGNVKMLCPFCRKH
TCYKCKKQWEPQHDGISCEQFQKWKEANDPEYQAAGLARHLRENGIDCPDCNYRYALAKG
GCMHFKCTQCSHEFCSGCRQAFKHGRQCGKLPSCASKGLHAHHPRDCLFYLRDWEPSKLV
KLLKDNGIQIDARGSQKKACDVMEQKETPDGLKDAPCGRPVEAGLAGLCKLHFIEYLVNL
INTNGLDPADIMTEDQLKACLFREGVGDSMAQRGRESNQDFRKRMLAEVKRFPLQHRQRK
GE
Nucleotide sequence
Length: 3,789
>Boschl.CG.Botznik2013.chr10.g25619.01.t
TGTCCGGGAAATTCCGGACATATGGCAACCCTAGCATAGGACCTCAGGACAGTGTCAAAC
AGAAACGGTATCAGCTCACTTTCCATGGCTTCCGATGCATAGATTCCGTTCCGGCGTCAG
CAAATATGGGAAGATGTGTTGGGATATATTTGGAATGTCAATCAAAAATCCTGCAGGATA
AGGATGTACGAAAATCCCTCGAAGCCAAAGTTCGCCAGGGACAAGCAAGGAAGGATGTCA
CTCGCAAACTAGTCGACGAGATGCTATTATATGATACTCCTATAGCCGGACGCTACGACT
TTCTCGACGTCATACGAATTCTACGAGACAACTGCCTTCCCTTCAATCCTGGACTCGAAG
CATTGATCCGCGGGCTGAGCATCCTTGAAAAATACGGCAAGAACTTGCTCAGACCGGAGA
AACCGCCGCAGTGGAGAGTGGTACGGCTCTCGAACGCGATATTCAAGCAAGAAGTAGACA
ACGTGAAAGGGGCGAGAAAGATTTTAGGTCAACTCGGGTATACGACAGCGGTAGAGGATG
GATTGGCGTATTCGGACACGCAGCTGATTCCTGATGTTCCAGTGGTTACTGGTGTCACCA
CGGACATTTTGCTGTTAAGAATGGAGTTGATCCTGCTTGCCCATGGCGAGCATACACAAG
AGGCGTCATTTTACTCCTATATCCCGGCTATCGAAATTAAGACTGTGCAAGAAAAAATGG
GAGTCTCAACTCTCCCTGCAGAGCCACCAATGTTTCAAACCCCTCTCCCTGCAGAGACGC
CCATCTTTCAAACCCCTCTCCCCGCAGAGACACCCATGTTTCATACCCCGCTCCCACCCC
CTCCCAGTTATCACCAAGTAGTTGAAGGCGCCAGGACACGCGGTAGCGCATTTGAAATTT
ATCCGCACCCACATGCGGCCACAGAAAGCAGCGATATTCATGCTGCAGGCGTCCTAGAAC
CGGCGCATCAAGATATTCCACAAGACGAGTTATGCGATCTGTGCGGGCAGGTGCCTCCCG
TTGTTGAATGCGAACTTTGCAGGAGCGTATATTGCGAAGATTGCAACAATCTCTGGCATG
GTAATCCTAAAAGACGAAACCACAGGGATAAATTAATTTCTTACAAACCCAAAATCAAAA
TAAGTAGCATGGAGGCCGTCGAAACTAGGCCGATTCAACCGGTGGTACCGCAACCACCCT
CAATAACTACCGCAGCACCTAACGATGACGATTTCTTGGCTTGGATGAATGAAAAAGCAG
TAGAAATCATAAATATATCCGATGAAAATCGGAAGCGTCAAAGGCTCGAGGACTGTCTGG
CTGAACTCGACGAAAAAGCTTCAAAATATCAGTTGGTTATCAACACTCTGAGCCAGCCTA
GCTCTAACAACAAGGAAAATCTGTTTCATCACGTCACCGGCAAGTTGCAAGAAATAAACG
ACTCTAAGGAGCAGTTACGAATAATGTGCGGGGTCGCGGACGTTCCGGTACGCCGGCCGC
GTCAATCTGCGTCGTATCAGGAAACTCGACCACAGCAGCCCCGGCAAACTCACTACAGCA
ATCCATCGTTGGACAATCGTGGTTCAGCACGTAGTAATATAGTGCTACCGGTTAACGAAG
GATCGTTAATCGATTTGGACCCTCCACCCGCTGAACCGTTCGAACCGCTCAGTCATACGA
GTCCAGGGGATAACCAAATTCTTTTAGCGGAACAGACTACATCGTTGAAGAGAAATATCG
ATGAAGAGCAGTCCGTGTCTTACCAGCCGGCTAAGGTGCAACGTAACGGCGAAACAGCGC
CTCAGAGTGCACGCATTTCCGATGAATTCGGAAACATGACGATTTTCGAAGGCACTGGAA
ATTTCGACGACGAACTGTCCGCCAGTCTCAAAAACCGGAGCGAAGCGCGCTCTCGCGAGT
TTATATCGAATCTGCCGAAAGACGAACTGCAGAGGAAGATAAGGCAGGAGGGAGTTCGGT
ATCAGACGACACAGTTTCTGGATCACGTTCGTGCGGGCGACGTGTCCAGTTTTCGTCCGG
AACAAGTGGAAGTGGCTCTCCGCGAGCTCGATAAGACTAACAGCTCGAATTTGGCGACGC
CCAACTCGTGGTTGGAGCGAAACTGGACAGACCAAGTGAGAGACTTTATACGGCTCGCTA
AAGAGAAAGGTTTCAGAATCAATCCGGAAGACGCGGAGGATATCTTGATAGAGGCTGATA
ACGTGTTTGAGAAGGCGCTTGAACTTGTTGTGATGGCGCAGAACGAACAAATCGCAGACG
TAGCCGGAGAATTCGGGTTTGAAACTGCAAAAAAGGCGTTGACGAAACACAAAGGTGACA
AGTACCTCGCGGTGGCGTCGATGCAGAAAGATAAATTGGTGGAGTTTTTGGGCGAATTCC
GTGAGTCGAATAATGCTTCGGAACATGAAAGTTCAGATTTAGCCACTGCGTTAGAGATTG
AAGACGATGTCAGAAGACGTAACGCGATTACCGCCCTACTGCAAATTCCGGACGGCATGT
ACTCCGACTCTCTCAATCATTTAATTCGTGTCATGCCAGAGAGATTGCGAGACACACTGC
TTGAAGATGCAGTGGAAGCGATTGTCGATAACGAAATGGTTCACGACGTAGACGCAGCCG
TACGGCATTTAGACAACGAATGCGCGATATGCATGGACCGATACCCGCGCAGCAAACTCT
CTTGTTTACCGACGTGCGGAGAGAACGGATGCGCCTACTGCTTGTCTTGCTTGCAACAGC
ATTTGGCGCTTTGTGTCAGCGAGAGAAATGTCCGTGACATCGTTTGTCCCATGTGTTCGA
ACCCGGATATCGGCGGAGTCGACGAAGACACCAAGACGCATTTCTTTAATCACATCGACG
CGATACTAAGGAACATGCCAGACGGAAGGAGAGTGCACGGAATCTACCAGGATAAGATGA
GAGACTATACTCTGATGCGGATGCCGAATTTTCGCTGGTGTTCACACTGCAGCGGTGGCT
TTCAATTTGATGGGGCCGACGGTAACGTGAAGATGCTGTGCCCGTTTTGCCGCAAGCACA
CCTGCTACAAATGTAAAAAGCAATGGGAGCCGCAGCATGACGGGATATCGTGCGAGCAGT
TTCAAAAATGGAAAGAAGCTAATGACCCGGAATATCAAGCCGCGGGCCTCGCGAGGCATT
TGAGAGAAAACGGTATCGATTGCCCAGATTGTAATTACAGGTATGCTCTAGCGAAAGGAG
GATGTATGCATTTCAAGTGCACGCAGTGCTCGCATGAGTTCTGTAGCGGGTGCAGACAAG
CTTTCAAACACGGGAGACAGTGCGGTAAACTACCTTCGTGTGCGAGTAAAGGATTGCACG
CGCATCACCCACGCGACTGCTTGTTTTATCTACGAGATTGGGAACCTAGCAAGCTCGTGA
AATTGCTTAAGGACAACGGGATTCAGATAGACGCAAGAGGATCGCAGAAAAAAGCTTGTG
ATGTGATGGAGCAGAAGGAAACGCCGGACGGTTTGAAAGACGCGCCTTGCGGCAGGCCAG
TAGAGGCAGGCCTGGCGGGGCTGTGTAAGCTGCATTTTATCGAGTATCTCGTCAATTTGA
TCAACACGAACGGATTGGATCCGGCGGATATTATGACTGAAGATCAGCTGAAAGCGTGTC
TGTTTCGGGAAGGGGTCGGTGATTCGATGGCCCAGCGGGGCAGAGAAAGCAATCAAGATT
TTAGGAAGAGAATGCTGGCCGAAGTGAAAAGGTTTCCTTTGCAGCATCGACAGCGTAAGG
GAGAGTGAA
| PANTHER |
RNF31 (IPR026254) - T[66-234] 4.5E-218 - T[331-391] 4.5E-218 - T[636-1254] 4.5E-218 |
| SUPERFAMILY |
PUB-like_dom_sf (IPR036339) - T[115-188] 3.53E-10 |
| Pfam |
PUB_domain (IPR018997) - T[120-179] 1.4E-10 |
| Pfam |
RNF31-UBA (IPR032065) - T[661-797] 8.4E-9 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[884-965] 9.1E-8 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[888-940] 9.229 |
| SMART |
IBR_dom (IPR002867) - T[974-1038] 5.0E-9 - T[1050-1127] 0.15 |
| Pfam |
IBR_dom (IPR002867) - T[976-1038] 3.2E-8 - T[1063-1108] 1.6E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RNF31_HUMAN | 36.441 % | 358 | 2.46E-105 |